RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 OPLAHO14841 1288 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 CBFA2T2O43439 604 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 KLRC4O43908 158 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 RPN1P04843 607 aaKnown RBP12.02□□□□□ -0.49
CLCN6-208ENST00000494028 RPS12P25398 132 aaKnown RBP12.02□□□□□ -0.49
CLCN6-208ENST00000494028 UBA7P41226 1012 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 MRPL12P52815 198 aaKnown RBP12.02□□□□□ -0.49
CLCN6-208ENST00000494028 GSDMDP57764 484 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 SNAP25P60880 206 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 NBPF9Q3BBW0 867 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 PPP4R3AQ6IN85 833 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 CCDC150Q8NCX0 1101 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 MBOAT7Q96N66 472 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 P2RX7Q99572 595 aaKnown RBP12.02□□□□□ -0.49
CLCN6-208ENST00000494028 AMNQ9BXJ7 453 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 PSTPIP2Q9H939 334 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 KBTBD4Q9NVX7 518 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 PRR12Q9ULL5 1215 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 CTNND2Q9UQB3 1225 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 PCDHA1Q9Y5I3 950 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 ZNF541Q9H0D2 1346 aa12.02□□□□□ -0.49
CLCN6-208ENST00000494028 COL11A1P12107 1806 aaPredicted RBP12.02□□□□□ -0.49
CLCN6-208ENST00000494028 RLFQ13129 1914 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 SSC5DA1L4H1 1573 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 TMEM232C9JQI7 657 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 EGFRP00533 1210 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 MYL1P05976 194 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 CAP2P40123 477 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 MAP3K10Q02779 954 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 GRB10Q13322 594 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 KCNB1Q14721 858 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 TNIP1Q15025 636 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 TMEM266Q2M3C6 531 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 TMEM119Q4V9L6 283 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 FAM83BQ5T0W9 1011 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 CDKAL1Q5VV42 579 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 KLHL10Q6JEL2 608 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 FILIP1Q7Z7B0 1213 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 FBXO11Q86XK2 927 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 VSTM4Q8IW00 320 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 RASSF8Q8NHQ8 419 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 CRYGNQ8WXF5 182 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 JDP2Q8WYK2 163 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 TEPSINQ96N21 525 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 PNMA5Q96PV4 448 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 NAP1L4Q99733 375 aaKnown RBP12.01□□□□□ -0.49
CLCN6-208ENST00000494028 VCPKMTQ9H867 229 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 GOPCQ9HD26 462 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 RMND1Q9NWS8 449 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 DDX25Q9UHL0 483 aaKnown RBP12.01□□□□□ -0.49
CLCN6-208ENST00000494028 BCS1LQ9Y276 419 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 GDAQ9Y2T3 454 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 LOXHD1Q8IVV2 1947 aa12.01□□□□□ -0.49
CLCN6-208ENST00000494028 A0A0G2JMZ2 1700 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 PTPRFP10586 1907 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 POTEMA6NI47 508 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 USP17L15C9J2P7 530 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 USP17L13C9JLJ4 530 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 USP17L11C9JVI0 530 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 USP17L18D6R9N7 530 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 USP17L22D6RA61 530 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 USP17L17D6RBQ6 530 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 USP17L19D6RCP7 530 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 USP17L20D6RJB6 530 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 MEIS2O14770 477 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 SERPINC1P01008 464 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 TECP42680 631 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 GMPSP49915 693 aaPredicted RBP12□□□□□ -0.49
CLCN6-208ENST00000494028 STAT2P52630 851 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 USP17L24Q0WX57 530 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 IKQ13123 557 aaPredicted RBP12□□□□□ -0.49
CLCN6-208ENST00000494028 NOLC1Q14978 699 aaKnown RBP eCLIP12□□□□□ -0.49
CLCN6-208ENST00000494028 USH1GQ495M9 461 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 ZNF658Q5TYW1 1059 aaPredicted RBP12□□□□□ -0.49
CLCN6-208ENST00000494028 SPATA1Q5VX52 437 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 USP17L6PQ6QN14 398 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 MOXD1Q6UVY6 613 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 CCDC84Q86UT8 332 aaPredicted RBP12□□□□□ -0.49
CLCN6-208ENST00000494028 LRRC8AQ8IWT6 810 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 SPICE1Q8N0Z3 855 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 HAS1Q92839 578 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 PLIN2Q99541 437 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 SYT17Q9BSW7 474 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 GLIS2Q9BZE0 524 aaPredicted RBP12□□□□□ -0.49
CLCN6-208ENST00000494028 RANBP17Q9H2T7 1088 aaKnown RBP12□□□□□ -0.49
CLCN6-208ENST00000494028 SAMSN1Q9NSI8 373 aaKnown RBP12□□□□□ -0.49
CLCN6-208ENST00000494028 STK17AQ9UEE5 414 aa12□□□□□ -0.49
CLCN6-208ENST00000494028 ASTN2O75129 1339 aaPredicted RBP12□□□□□ -0.49
CLCN6-208ENST00000494028 RHOBTB3O94955 611 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 SREBF1P36956 1147 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 TXKP42681 527 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 STX17P56962 302 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 UBASH3AP57075 661 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 PAK1Q13153 545 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 ARMCX5Q6P1M9 558 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 APTXQ7Z2E3 356 aaKnown RBP11.99□□□□□ -0.49
CLCN6-208ENST00000494028 MICALL2Q8IY33 904 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 SNX29Q8TEQ0 813 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 NAP1L5Q96NT1 182 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms