RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	IGHA2	P01877	340 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	GJB1	P08034	283 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	CAPN2	P17655	700 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	CALML3	P27482	149 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	CDC27	P30260	824 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	CYP2C19	P33261	490 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	MRPL12	P52815	198 aa	Known RBP	11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	AK2	P54819	239 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	RPS6	P62753	249 aa	Known RBP	11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	CNTN2	Q02246	1040 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	CACNB2	Q08289	660 aa	Predicted RBP	11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	TRIM32	Q13049	653 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	BAAT	Q14032	418 aa	Predicted RBP	11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	MTFR1	Q15390	333 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	CPLX2	Q6PUV4	134 aa	Known RBP	11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	SLC30A10	Q6XR72	485 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	CCDC82	Q8N4S0	544 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	ZNF713	Q8N859	430 aa	Predicted RBP	11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	UNC93B1	Q9H1C4	597 aa		11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	PAK6	Q9NQU5	681 aa	Predicted RBP	11.54	□□□□□ -0.56
MACF1-222	ENST00000494012	CENPF	P49454	3210 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	CPLX1	O14810	134 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	MSC	O60682	206 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	CFB	P00751	764 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	CYBA	P13498	195 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	ADD1	P35611	737 aa	Known RBP	11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	HSD17B4	P51659	736 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	AKAP17A	Q02040	695 aa	Known RBP	11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	GHRHR	Q02643	423 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	FUT2	Q10981	343 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	PPP1R18	Q6NYC8	613 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	HEATR3	Q7Z4Q2	680 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	TEX2	Q8IWB9	1127 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	TRIM22	Q8IYM9	498 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	DNER	Q8NFT8	737 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	PCDH10	Q9P2E7	1040 aa		11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	KIAA0100	Q14667	2235 aa	Known RBP	11.53	□□□□□ -0.56
MACF1-222	ENST00000494012	SOWAHB	A6NEL2	793 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	CDKL5	O76039	1030 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	POLR2M	P0CAP2	368 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	IFNAR1	P17181	557 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	CNGA1	P29973	690 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	CCND3	P30281	292 aa	Predicted RBP	11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	GJA8	P48165	433 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	ALDH5A1	P51649	535 aa	Predicted RBP	11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	SOX10	P56693	466 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	CCT2	P78371	535 aa	Known RBP	11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	RABEP1	Q15276	862 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	ARMCX2	Q7L311	632 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	CUL5	Q93034	780 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	FGD4	Q96M96	766 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	DEFB118	Q96PH6	123 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	RNF26	Q9BY78	433 aa	Predicted RBP	11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	BACH2	Q9BYV9	841 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	SLK	Q9H2G2	1235 aa	Predicted RBP	11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	ABHD16B	Q9H3Z7	469 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	TPCN1	Q9ULQ1	816 aa		11.52	□□□□□ -0.57
MACF1-222	ENST00000494012		V9GY48	417 aa	Predicted RBP	11.52	□□□□□ -0.57
MACF1-222	ENST00000494012	KIAA1217	Q5T5P2	1943 aa		11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	hCG_1642624	A0A1W2PR95	340 aa		11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	OPLAH	O14841	1288 aa		11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	SEPT4	O43236	478 aa		11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	STK3	Q13188	491 aa		11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	PFKFB3	Q16875	520 aa	Predicted RBP	11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	NSUN6	Q8TEA1	469 aa	Known RBP	11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	U2AF1L4	Q8WU68	220 aa	Known RBP	11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	TBC1D32	Q96NH3	1257 aa		11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	KIF2C	Q99661	725 aa		11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	NCOA5	Q9HCD5	579 aa	Known RBP	11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	ASTN1	O14525	1302 aa		11.51	□□□□□ -0.57
MACF1-222	ENST00000494012	PIK3CD	O00329	1044 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	PRPF3	O43395	683 aa	Known RBP	11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	ST18	O60284	1047 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	PFKFB2	O60825	505 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	SGPL1	O95470	568 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	SNAI1	O95863	264 aa	Predicted RBP	11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	SCG2	P13521	617 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	AKR1A1	P14550	325 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	NAPA	P54920	295 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	PDE4D	Q08499	809 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	ACVR2B	Q13705	512 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	NTRK3	Q16288	839 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	ARHGEF16	Q5VV41	709 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	WWC2	Q6AWC2	1192 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	NOL8	Q76FK4	1167 aa	Known RBP	11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	SMARCC2	Q8TAQ2	1214 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	MORC4	Q8TE76	937 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	PHKB	Q93100	1093 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	IWS1	Q96ST2	819 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	RMDN3	Q96TC7	470 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	LARP6	Q9BRS8	491 aa	Known RBP	11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	GLT8D2	Q9H1C3	349 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	PSTPIP2	Q9H939	334 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	VTA1	Q9NP79	307 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms