RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 UPF3BQ9BZI7 483 aaKnown RBP13.56□□□□□ -0.24
UBA3-211ENST00000493957 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.56□□□□□ -0.24
UBA3-211ENST00000493957 RIOX1Q9H6W3 641 aa13.56□□□□□ -0.24
UBA3-211ENST00000493957 FBXO40Q9UH90 709 aa13.56□□□□□ -0.24
UBA3-211ENST00000493957 SLC12A7Q9Y666 1083 aa13.56□□□□□ -0.24
UBA3-211ENST00000493957 KLF18A0A0U1RQI7 1052 aa13.55□□□□□ -0.24
UBA3-211ENST00000493957 SOWAHBA6NEL2 793 aa13.55□□□□□ -0.24
UBA3-211ENST00000493957 HMGB1P09429 215 aaKnown RBP13.55□□□□□ -0.24
UBA3-211ENST00000493957 OLFML2BQ68BL8 750 aa13.55□□□□□ -0.24
UBA3-211ENST00000493957 TRMT44Q8IYL2 757 aaKnown RBP13.55□□□□□ -0.24
UBA3-211ENST00000493957 TMTC2Q8N394 836 aa13.55□□□□□ -0.24
UBA3-211ENST00000493957 SRBD1Q8N5C6 995 aaKnown RBP13.55□□□□□ -0.24
UBA3-211ENST00000493957 FAM133AQ8N9E0 248 aa13.55□□□□□ -0.24
UBA3-211ENST00000493957 CTCFLQ8NI51 663 aaPredicted RBP13.55□□□□□ -0.24
UBA3-211ENST00000493957 TBC1D5Q92609 795 aa13.55□□□□□ -0.24
UBA3-211ENST00000493957 BRF1Q92994 677 aa13.55□□□□□ -0.24
UBA3-211ENST00000493957 DEFB118Q96PH6 123 aa13.55□□□□□ -0.24
UBA3-211ENST00000493957 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
UBA3-211ENST00000493957 ZSWIM6Q9HCJ5 1215 aa13.55□□□□□ -0.24
UBA3-211ENST00000493957 PAK6Q9NQU5 681 aaPredicted RBP13.55□□□□□ -0.24
UBA3-211ENST00000493957 CYP39A1Q9NYL5 469 aa13.55□□□□□ -0.24
UBA3-211ENST00000493957 MKI67P46013 3256 aaKnown RBP13.55□□□□□ -0.24
UBA3-211ENST00000493957 MYH7BA7E2Y1 1941 aa13.54□□□□□ -0.24
UBA3-211ENST00000493957 hCG_1642624A0A1W2PR95 340 aa13.54□□□□□ -0.24
UBA3-211ENST00000493957 OPLAHO14841 1288 aa13.54□□□□□ -0.24
UBA3-211ENST00000493957 CYBAP13498 195 aa13.54□□□□□ -0.24
UBA3-211ENST00000493957 CDC27P30260 824 aa13.54□□□□□ -0.24
UBA3-211ENST00000493957 BAATQ14032 418 aaPredicted RBP13.54□□□□□ -0.24
UBA3-211ENST00000493957 TOB2Q14106 344 aaPredicted RBP13.54□□□□□ -0.24
UBA3-211ENST00000493957 MFSD14CQ5VZR4 134 aa13.54□□□□□ -0.24
UBA3-211ENST00000493957 RUFY3Q7L099 469 aa13.54□□□□□ -0.24
UBA3-211ENST00000493957 FBXO11Q86XK2 927 aa13.54□□□□□ -0.24
UBA3-211ENST00000493957 CCDC82Q8N4S0 544 aa13.54□□□□□ -0.24
UBA3-211ENST00000493957 MAP3K14Q99558 947 aa13.54□□□□□ -0.24
UBA3-211ENST00000493957 HMX1Q9NP08 348 aaPredicted RBP13.54□□□□□ -0.24
UBA3-211ENST00000493957 FAM217BQ9NTX9 383 aaPredicted RBP13.54□□□□□ -0.24
UBA3-211ENST00000493957 NAP1L2Q9ULW6 460 aaPredicted RBP13.54□□□□□ -0.24
UBA3-211ENST00000493957 RPTORQ8N122 1335 aa13.54□□□□□ -0.24
UBA3-211ENST00000493957 DOCK5Q9H7D0 1870 aa13.54□□□□□ -0.24
UBA3-211ENST00000493957 ZBTB5O15062 677 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 ZBTB43O43298 467 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 GJB1P08034 283 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 PSMA5P28066 241 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 FGD1P98174 961 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 ANO1Q5XXA6 986 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 TMTC3Q6ZXV5 915 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 FANCBQ8NB91 859 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 U2AF1L4Q8WU68 220 aaKnown RBP13.53□□□□□ -0.24
UBA3-211ENST00000493957 TINF2Q9BSI4 451 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 SPZ1Q9BXG8 430 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 AGXT2Q9BYV1 514 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 SLC5A4Q9NY91 659 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 DIS3Q9Y2L1 958 aaKnown RBP13.53□□□□□ -0.24
UBA3-211ENST00000493957 PFASO15067 1338 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 ABCB11O95342 1321 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 CNTNAP5Q8WYK1 1306 aa13.53□□□□□ -0.24
UBA3-211ENST00000493957 PTPDC1A2A3K4 754 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 GOLGA8AA7E2F4 631 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 GOLGA8BA8MQT2 603 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 SNAI1O95863 264 aaPredicted RBP13.52□□□□□ -0.25
UBA3-211ENST00000493957 CALM1P0DP23 149 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 CALM2P0DP24 149 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 CALM3P0DP25 149 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 CALML3P27482 149 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 CNGA1P29973 690 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 KIF5BP33176 963 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 GJA8P48165 433 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 RPS6P62753 249 aaKnown RBP13.52□□□□□ -0.25
UBA3-211ENST00000493957 RTN1Q16799 776 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 LENG1Q96BZ8 264 aaPredicted RBP13.52□□□□□ -0.25
UBA3-211ENST00000493957 AMNQ9BXJ7 453 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 TM6SF1Q9BZW5 370 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 COL20A1Q9P218 1284 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 CYP46A1Q9Y6A2 500 aa13.52□□□□□ -0.25
UBA3-211ENST00000493957 PNMA6FA0A0J9YX94 578 aa13.51□□□□□ -0.25
UBA3-211ENST00000493957 SGPL1O95470 568 aa13.51□□□□□ -0.25
UBA3-211ENST00000493957 RGS19P49795 217 aa13.51□□□□□ -0.25
UBA3-211ENST00000493957 FUT2Q10981 343 aa13.51□□□□□ -0.25
UBA3-211ENST00000493957 SYNE3Q6ZMZ3 975 aa13.51□□□□□ -0.25
UBA3-211ENST00000493957 RNF207Q6ZRF8 634 aa13.51□□□□□ -0.25
UBA3-211ENST00000493957 ARMCX2Q7L311 632 aa13.51□□□□□ -0.25
UBA3-211ENST00000493957 ZNF467Q7Z7K2 595 aaPredicted RBP13.51□□□□□ -0.25
UBA3-211ENST00000493957 PCDHA1Q9Y5I3 950 aa13.51□□□□□ -0.25
UBA3-211ENST00000493957 NID2Q14112 1375 aa13.5□□□□□ -0.25
UBA3-211ENST00000493957 PPFIA3O75145 1194 aa13.5□□□□□ -0.25
UBA3-211ENST00000493957 ZNF865P0CJ78 1059 aaPredicted RBP13.5□□□□□ -0.25
UBA3-211ENST00000493957 PTGS1P23219 599 aa13.5□□□□□ -0.25
UBA3-211ENST00000493957 ADD1P35611 737 aaKnown RBP13.5□□□□□ -0.25
UBA3-211ENST00000493957 MAMDC4Q6UXC1 1216 aa13.5□□□□□ -0.25
UBA3-211ENST00000493957 FBXL16Q8N461 479 aa13.5□□□□□ -0.25
UBA3-211ENST00000493957 DIS3LQ8TF46 1054 aaKnown RBP13.5□□□□□ -0.25
UBA3-211ENST00000493957 IL17RAQ96F46 866 aa13.5□□□□□ -0.25
UBA3-211ENST00000493957 KATNBL1Q9H079 304 aa13.5□□□□□ -0.25
UBA3-211ENST00000493957 CRISPLD2Q9H0B8 497 aa13.5□□□□□ -0.25
UBA3-211ENST00000493957 NCOA5Q9HCD5 579 aaKnown RBP13.5□□□□□ -0.25
UBA3-211ENST00000493957 PDRG1Q9NUG6 133 aa13.5□□□□□ -0.25
UBA3-211ENST00000493957 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.5□□□□□ -0.25
UBA3-211ENST00000493957 MRPL11Q9Y3B7 192 aaKnown RBP13.5□□□□□ -0.25
UBA3-211ENST00000493957 SYNGAP1Q96PV0 1343 aa13.49□□□□□ -0.25
UBA3-211ENST00000493957 ADCY6O43306 1168 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms