RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 TESK1Q15569 626 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 RSPO4Q2I0M5 234 aaPredicted RBP5.75□□□□□ -1.49
GTF3A-208ENST00000493903 ACBD5Q5T8D3 534 aaPredicted RBP5.75□□□□□ -1.49
GTF3A-208ENST00000493903 IQSEC1Q6DN90 963 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 SLC4A10Q6U841 1118 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 Q6ZS46 218 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 KREMEN2Q8NCW0 462 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.75□□□□□ -1.49
GTF3A-208ENST00000493903 XAGE3Q8WTP9 111 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 TP53INP1Q96A56 240 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 NOB1Q9ULX3 412 aaKnown RBP5.75□□□□□ -1.49
GTF3A-208ENST00000493903 RNF112Q9ULX5 631 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 TRAF6Q9Y4K3 522 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 PCDHA9Q9Y5H5 950 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 ASXL2Q76L83 1435 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.74□□□□□ -1.49
GTF3A-208ENST00000493903 ARVCFO00192 962 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 GAS7O60861 476 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 FKBP9O95302 570 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 ADCYAP1R1P41586 468 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 ASPAP45381 313 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 GPR85P60893 370 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 PPP2R5DQ14738 602 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 PTPN21Q16825 1174 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 INAVAQ3KP66 663 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 ATP13A4Q4VNC1 1196 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 NKAPLQ5M9Q1 402 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 TMEM240Q5SV17 173 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 LETMD1Q6P1Q0 360 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 KSR2Q6VAB6 950 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 FKBP9P1Q75LS8 142 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 DYMQ7RTS9 669 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 MTDHQ86UE4 582 aaKnown RBP5.74□□□□□ -1.49
GTF3A-208ENST00000493903 DZIP1LQ8IYY4 767 aaKnown RBP5.74□□□□□ -1.49
GTF3A-208ENST00000493903 IFNL3Q8IZI9 196 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 CBARPQ8N350 705 aaPredicted RBP5.74□□□□□ -1.49
GTF3A-208ENST00000493903 IL17RAQ96F46 866 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 COX4I2Q96KJ9 171 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 UBL7Q96S82 380 aaPredicted RBP5.74□□□□□ -1.49
GTF3A-208ENST00000493903 PRDM14Q9GZV8 571 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 PRDM16Q9HAZ2 1276 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 CABP5Q9NP86 173 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 CHST12Q9NRB3 414 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 BSDC1Q9NW68 430 aaPredicted RBP5.74□□□□□ -1.49
GTF3A-208ENST00000493903 OBP2AQ9NY56 170 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 ANKRD6Q9Y2G4 727 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 ZKSCAN5Q9Y2L8 839 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 LUC7L2Q9Y383 392 aaKnown RBP5.74□□□□□ -1.49
GTF3A-208ENST00000493903 NPFFR2Q9Y5X5 522 aa5.74□□□□□ -1.49
GTF3A-208ENST00000493903 HMGB1P1B2RPK0 211 aaPredicted RBP5.73□□□□□ -1.49
GTF3A-208ENST00000493903 M0R2C6 588 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 GLRX3O76003 335 aaKnown RBP5.73□□□□□ -1.49
GTF3A-208ENST00000493903 SNUPNO95149 360 aaKnown RBP5.73□□□□□ -1.49
GTF3A-208ENST00000493903 CT47B1P0C2W7 299 aaPredicted RBP5.73□□□□□ -1.49
GTF3A-208ENST00000493903 TRIM27P14373 513 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 VCAM1P19320 739 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 ERVK-21P61565 698 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 POU4F1Q01851 419 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 CYP4F3Q08477 520 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 MINDY4Q4G0A6 757 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 TMED8Q6PL24 325 aaPredicted RBP5.73□□□□□ -1.49
GTF3A-208ENST00000493903 C11orf74Q86VG3 221 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 FUBP3Q96I24 572 aaKnown RBP eCLIP5.73□□□□□ -1.49
GTF3A-208ENST00000493903 SCYL1Q96KG9 808 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 DSCC1Q9BVC3 393 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 CELF4Q9BZC1 486 aaKnown RBP5.73□□□□□ -1.49
GTF3A-208ENST00000493903 GPR27Q9NS67 375 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 B4GALT6Q9UBX8 382 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 IP6K2Q9UHH9 426 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 GPR55Q9Y2T6 319 aaPredicted RBP5.73□□□□□ -1.49
GTF3A-208ENST00000493903 GIT1Q9Y2X7 761 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 ST14Q9Y5Y6 855 aa5.73□□□□□ -1.49
GTF3A-208ENST00000493903 ZNF891A8MT65 544 aaPredicted RBP5.72□□□□□ -1.49
GTF3A-208ENST00000493903 PRPF3O43395 683 aaKnown RBP5.72□□□□□ -1.49
GTF3A-208ENST00000493903 ADAM23O75077 832 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 CYP7A1P22680 504 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 CCND1P24385 295 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 RECQLP46063 649 aaPredicted RBP5.72□□□□□ -1.49
GTF3A-208ENST00000493903 SESN3P58005 492 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 KLF1Q13351 362 aaPredicted RBP5.72□□□□□ -1.49
GTF3A-208ENST00000493903 GTF2H3Q13889 308 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 MORC3Q14149 939 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 DHX8Q14562 1220 aaKnown RBP5.72□□□□□ -1.49
GTF3A-208ENST00000493903 ZRSR2Q15696 482 aaKnown RBP5.72□□□□□ -1.49
GTF3A-208ENST00000493903 PRSS53Q2L4Q9 553 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 SKOR2Q2VWA4 1001 aaPredicted RBP5.72□□□□□ -1.49
GTF3A-208ENST00000493903 HSP90AB4PQ58FF6 505 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 E4F1Q66K89 784 aaPredicted RBP5.72□□□□□ -1.49
GTF3A-208ENST00000493903 ANKRD34AQ69YU3 496 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 DENND5AQ6IQ26 1287 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 ABHD17CQ6PCB6 329 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 KCNT2Q6UVM3 1135 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 APBB1IPQ7Z5R6 666 aaPredicted RBP5.72□□□□□ -1.49
GTF3A-208ENST00000493903 CDH24Q86UP0 819 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 NXPE1Q8N323 547 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 IGSF22Q8N9C0 903 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 C2CD4AQ8NCU7 369 aaPredicted RBP5.72□□□□□ -1.49
GTF3A-208ENST00000493903 COPS5Q92905 334 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 ZDHHC15Q96MV8 337 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 MIPEPQ99797 713 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms