RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 DNERQ8NFT8 737 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 KCNB2Q92953 911 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 MTMR8Q96EF0 704 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 FGD4Q96M96 766 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 PIGSQ96S52 555 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 LRRC2Q9BYS8 371 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 SENP6Q9GZR1 1112 aaPredicted RBP8.1□□□□□ -1.11
TOP3A-207ENST00000493648 SPC25Q9HBM1 224 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 GPHNQ9NQX3 736 aaPredicted RBP8.1□□□□□ -1.11
TOP3A-207ENST00000493648 MAP3K20Q9NYL2 800 aaKnown RBP8.1□□□□□ -1.11
TOP3A-207ENST00000493648 PCDHA1Q9Y5I3 950 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 CENPFP49454 3210 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 CFBP00751 764 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 COL6A1P12109 1028 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 ALDH5A1P51649 535 aaPredicted RBP8.09□□□□□ -1.11
TOP3A-207ENST00000493648 TNFAIP2Q03169 654 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 PDE4DQ08499 809 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 LRRC41Q15345 812 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 CCDC144BQ3MJ40 725 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 IQSEC1Q6DN90 963 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 BLOC1S2Q6QNY1 142 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 SLC30A10Q6XR72 485 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 NOL8Q76FK4 1167 aaKnown RBP8.09□□□□□ -1.11
TOP3A-207ENST00000493648 SGMS1Q86VZ5 419 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 HOMER1Q86YM7 354 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 MORC4Q8TE76 937 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 TBC1D5Q92609 795 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 RRP36Q96EU6 259 aaKnown RBP8.09□□□□□ -1.11
TOP3A-207ENST00000493648 JAKMIP1Q96N16 626 aaKnown RBP8.09□□□□□ -1.11
TOP3A-207ENST00000493648 PURBQ96QR8 312 aaKnown RBP8.09□□□□□ -1.11
TOP3A-207ENST00000493648 MYL10Q9BUA6 226 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 SPZ1Q9BXG8 430 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 VTA1Q9NP79 307 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 SEC63Q9UGP8 760 aaKnown RBP8.09□□□□□ -1.11
TOP3A-207ENST00000493648 SNX14Q9Y5W7 946 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 MCM3APO60318 1980 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 PDE4DIPQ5VU43 2346 aa8.09□□□□□ -1.11
TOP3A-207ENST00000493648 FRMPD3Q5JV73 1810 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 H0YGN5 161 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 CYTH3O43739 400 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 PGK1P00558 417 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 RXRAP19793 462 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 ADCYAP1R1P41586 468 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 PPP2R5BQ15173 497 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 ARHGEF16Q5VV41 709 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 EEPD1Q7L9B9 569 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 PCSK9Q8NBP7 692 aaKnown RBP8.08□□□□□ -1.12
TOP3A-207ENST00000493648 SYTL5Q8TDW5 730 aaPredicted RBP8.08□□□□□ -1.12
TOP3A-207ENST00000493648 NSUN6Q8TEA1 469 aaKnown RBP8.08□□□□□ -1.12
TOP3A-207ENST00000493648 PIBF1Q8WXW3 757 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 IWS1Q96ST2 819 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 TSEN34Q9BSV6 310 aaKnown RBP8.08□□□□□ -1.12
TOP3A-207ENST00000493648 USP26Q9BXU7 913 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 KATNBL1Q9H079 304 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 AP5M1Q9H0R1 490 aa8.08□□□□□ -1.12
TOP3A-207ENST00000493648 RBM28Q9NW13 759 aaKnown RBP8.08□□□□□ -1.12
TOP3A-207ENST00000493648 BAZ2BQ9UIF8 2168 aaKnown RBP8.08□□□□□ -1.12
TOP3A-207ENST00000493648 ASTN1O14525 1302 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 KLF18A0A0U1RQI7 1052 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 CCDC196A0A1B0GTZ2 297 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 GCOM1H8Y6P7 765 aaPredicted RBP8.07□□□□□ -1.12
TOP3A-207ENST00000493648 TNRC18O15417 2968 aaPredicted RBP8.07□□□□□ -1.12
TOP3A-207ENST00000493648 ZBTB43O43298 467 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 ZEB2O60315 1214 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 PPP1R11O60927 126 aaPredicted RBP8.07□□□□□ -1.12
TOP3A-207ENST00000493648 ADAMTS4O75173 837 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 C6orf222P0C671 652 aaPredicted RBP8.07□□□□□ -1.12
TOP3A-207ENST00000493648 POLR2MP0CAP2 368 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 HSD17B4P51659 736 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 ATN1P54259 1190 aaPredicted RBP8.07□□□□□ -1.12
TOP3A-207ENST00000493648 GJA9P57773 515 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 COL9A3Q14050 684 aaPredicted RBP8.07□□□□□ -1.12
TOP3A-207ENST00000493648 STXBP2Q15833 593 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 KCNA10Q16322 511 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 SLC35G1Q2M3R5 365 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 GNASQ5JWF2 1037 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 TAPT1Q6NXT6 567 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 APOA5Q6Q788 366 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 SLC39A5Q6ZMH5 540 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 Q6ZUG5 572 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 RAB11FIP4Q86YS3 637 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 FBXO16Q8IX29 292 aaPredicted RBP8.07□□□□□ -1.12
TOP3A-207ENST00000493648 C7orf61Q8IZ16 206 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 CMTR1Q8N1G2 835 aaKnown RBP8.07□□□□□ -1.12
TOP3A-207ENST00000493648 CCDC82Q8N4S0 544 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 SRBD1Q8N5C6 995 aaKnown RBP8.07□□□□□ -1.12
TOP3A-207ENST00000493648 KLHDC9Q8NEP7 349 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 FERMT2Q96AC1 680 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 TCEANC2Q96MN5 208 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 TAAR1Q96RJ0 339 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 RMDN3Q96TC7 470 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 WDR11Q9BZH6 1224 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 PDGFCQ9NRA1 345 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 BRPF3Q9ULD4 1205 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 NAP1L2Q9ULW6 460 aaPredicted RBP8.07□□□□□ -1.12
TOP3A-207ENST00000493648 PHF24Q9UPV7 400 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 Q9Y3F1 56 aa8.07□□□□□ -1.12
TOP3A-207ENST00000493648 SYNRGQ9UMZ2 1314 aa8.06□□□□□ -1.12
TOP3A-207ENST00000493648 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.06□□□□□ -1.12
TOP3A-207ENST00000493648 RBM47A0AV96 593 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms