RNA–Protein interactions for RNA: ENST00000493212.1

PHTF1-212, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 956 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-212ENST00000493212 ADD3Q9UEY8 706 aaKnown RBP24.38■■□□□ 1.49
PHTF1-212ENST00000493212 SPTBN5Q9NRC6 3674 aaKnown RBP24.38■■□□□ 1.49
PHTF1-212ENST00000493212 UMODL1Q5DID0 1318 aa24.37■■□□□ 1.49
PHTF1-212ENST00000493212 RBM47A0AV96 593 aaKnown RBP24.37■■□□□ 1.49
PHTF1-212ENST00000493212 ZEB2O60315 1214 aa24.37■■□□□ 1.49
PHTF1-212ENST00000493212 ACRP10323 421 aa24.37■■□□□ 1.49
PHTF1-212ENST00000493212 KIAA1211Q6ZU35 1233 aa24.37■■□□□ 1.49
PHTF1-212ENST00000493212 TIFAQ96CG3 184 aa24.37■■□□□ 1.49
PHTF1-212ENST00000493212 ZNF576Q9H609 170 aa24.37■■□□□ 1.49
PHTF1-212ENST00000493212 IL23AQ9NPF7 189 aa24.37■■□□□ 1.49
PHTF1-212ENST00000493212 GRXCR1A8MXD5 290 aa24.36■■□□□ 1.49
PHTF1-212ENST00000493212 B4GALT4O60513 344 aa24.36■■□□□ 1.49
PHTF1-212ENST00000493212 AAMPQ13685 434 aa24.36■■□□□ 1.49
PHTF1-212ENST00000493212 SLC30A10Q6XR72 485 aa24.36■■□□□ 1.49
PHTF1-212ENST00000493212 HERVK_113Q902F9 699 aa24.36■■□□□ 1.49
PHTF1-212ENST00000493212 PBX4Q9BYU1 374 aa24.36■■□□□ 1.49
PHTF1-212ENST00000493212 HIPK3Q9H422 1215 aa24.36■■□□□ 1.49
PHTF1-212ENST00000493212 WDR19Q8NEZ3 1342 aa24.35■■□□□ 1.49
PHTF1-212ENST00000493212 PBX2P40425 430 aa24.35■■□□□ 1.49
PHTF1-212ENST00000493212 PSMC6P62333 389 aa24.35■■□□□ 1.49
PHTF1-212ENST00000493212 MFSD6Q6ZSS7 791 aa24.35■■□□□ 1.49
PHTF1-212ENST00000493212 NOC4LQ9BVI4 516 aaKnown RBP24.35■■□□□ 1.49
PHTF1-212ENST00000493212 TRPV6Q9H1D0 765 aa24.35■■□□□ 1.49
PHTF1-212ENST00000493212 OSBPL3Q9H4L5 887 aa24.35■■□□□ 1.49
PHTF1-212ENST00000493212 PNMA2Q9UL42 364 aa24.35■■□□□ 1.49
PHTF1-212ENST00000493212 PTPDC1A2A3K4 754 aa24.34■■□□□ 1.49
PHTF1-212ENST00000493212 TRIM6-TRIM34B2RNG4 842 aa24.34■■□□□ 1.49
PHTF1-212ENST00000493212 SDSP20132 328 aa24.34■■□□□ 1.49
PHTF1-212ENST00000493212 EDNRBP24530 442 aa24.34■■□□□ 1.49
PHTF1-212ENST00000493212 VWCEQ96DN2 955 aa24.34■■□□□ 1.49
PHTF1-212ENST00000493212 WDR11Q9BZH6 1224 aa24.34■■□□□ 1.49
PHTF1-212ENST00000493212 WNT8AQ9H1J5 351 aa24.34■■□□□ 1.49
PHTF1-212ENST00000493212 NEDD4P46934 1319 aa24.34■■□□□ 1.49
PHTF1-212ENST00000493212 RPS6P62753 249 aaKnown RBP24.33■■□□□ 1.49
PHTF1-212ENST00000493212 PLEKHM2Q8IWE5 1019 aa24.33■■□□□ 1.49
PHTF1-212ENST00000493212 RILPL2Q969X0 211 aa24.33■■□□□ 1.49
PHTF1-212ENST00000493212 RNF41Q9H4P4 317 aaPredicted RBP24.33■■□□□ 1.49
PHTF1-212ENST00000493212 CXXC1Q9P0U4 656 aaPredicted RBP24.33■■□□□ 1.49
PHTF1-212ENST00000493212 LAMA4Q16363 1823 aa24.33■■□□□ 1.48
PHTF1-212ENST00000493212 MFAP1P55081 439 aaKnown RBP24.32■■□□□ 1.48
PHTF1-212ENST00000493212 PURAQ00577 322 aaKnown RBP24.32■■□□□ 1.48
PHTF1-212ENST00000493212 RNF207Q6ZRF8 634 aa24.32■■□□□ 1.48
PHTF1-212ENST00000493212 ALDH8A1Q9H2A2 487 aaPredicted RBP24.32■■□□□ 1.48
PHTF1-212ENST00000493212 CALML3P27482 149 aa24.31■■□□□ 1.48
PHTF1-212ENST00000493212 NT5C2P49902 561 aa24.31■■□□□ 1.48
PHTF1-212ENST00000493212 GPATCH4Q5T3I0 446 aaKnown RBP24.31■■□□□ 1.48
PHTF1-212ENST00000493212 CHD1LQ86WJ1 897 aa24.31■■□□□ 1.48
PHTF1-212ENST00000493212 DGKHQ86XP1 1220 aa24.31■■□□□ 1.48
PHTF1-212ENST00000493212 USP38Q8NB14 1042 aa24.31■■□□□ 1.48
PHTF1-212ENST00000493212 DNERQ8NFT8 737 aa24.31■■□□□ 1.48
PHTF1-212ENST00000493212 ESR2Q92731 530 aa24.31■■□□□ 1.48
PHTF1-212ENST00000493212 POLR3EQ9NVU0 708 aa24.31■■□□□ 1.48
PHTF1-212ENST00000493212 FGBP02675 491 aa24.3■■□□□ 1.48
PHTF1-212ENST00000493212 CCL23P55773 120 aa24.3■■□□□ 1.48
PHTF1-212ENST00000493212 RGS22Q8NE09 1264 aa24.3■■□□□ 1.48
PHTF1-212ENST00000493212 ZKSCAN3Q9BRR0 538 aa24.3■■□□□ 1.48
PHTF1-212ENST00000493212 SCN10AQ9Y5Y9 1956 aa24.29■■□□□ 1.48
PHTF1-212ENST00000493212 IGHDP01880 384 aa24.29■■□□□ 1.48
PHTF1-212ENST00000493212 CPT1AP50416 773 aa24.29■■□□□ 1.48
PHTF1-212ENST00000493212 NUCB1Q02818 461 aa24.29■■□□□ 1.48
PHTF1-212ENST00000493212 B4GALNT3Q6L9W6 998 aa24.29■■□□□ 1.48
PHTF1-212ENST00000493212 ANKS1AQ92625 1134 aa24.29■■□□□ 1.48
PHTF1-212ENST00000493212 RWDD1Q9H446 243 aaPredicted RBP24.29■■□□□ 1.48
PHTF1-212ENST00000493212 CHD7Q9P2D1 2997 aa24.29■■□□□ 1.48
PHTF1-212ENST00000493212 ZNF213O14771 459 aa24.28■■□□□ 1.48
PHTF1-212ENST00000493212 NKRFO15226 690 aaKnown RBP eCLIP24.28■■□□□ 1.48
PHTF1-212ENST00000493212 GOLGA8HP0CJ92 632 aa24.28■■□□□ 1.48
PHTF1-212ENST00000493212 OR6J1Q8NGC5 347 aa24.28■■□□□ 1.48
PHTF1-212ENST00000493212 MTIF3Q9H2K0 278 aaKnown RBP24.28■■□□□ 1.48
PHTF1-212ENST00000493212 CPVLQ9H3G5 476 aa24.28■■□□□ 1.48
PHTF1-212ENST00000493212 TRMT13Q9NUP7 481 aaKnown RBP24.28■■□□□ 1.48
PHTF1-212ENST00000493212 A6NJR5 290 aa24.27■■□□□ 1.48
PHTF1-212ENST00000493212 PDE4DQ08499 809 aa24.27■■□□□ 1.48
PHTF1-212ENST00000493212 RAB30Q15771 203 aa24.27■■□□□ 1.48
PHTF1-212ENST00000493212 OTOP2Q7RTS6 562 aa24.27■■□□□ 1.48
PHTF1-212ENST00000493212 PNMA1Q8ND90 353 aa24.27■■□□□ 1.48
PHTF1-212ENST00000493212 SCFD2Q8WU76 684 aa24.27■■□□□ 1.48
PHTF1-212ENST00000493212 MTG1Q9BT17 334 aaPredicted RBP24.27■■□□□ 1.48
PHTF1-212ENST00000493212 UBA5Q9GZZ9 404 aa24.27■■□□□ 1.48
PHTF1-212ENST00000493212 MAF1Q9H063 256 aa24.27■■□□□ 1.48
PHTF1-212ENST00000493212 GBF1Q92538 1859 aa24.27■■□□□ 1.48
PHTF1-212ENST00000493212 KDM4AO75164 1064 aa24.26■■□□□ 1.47
PHTF1-212ENST00000493212 PPP2R5BQ15173 497 aa24.26■■□□□ 1.47
PHTF1-212ENST00000493212 CWC27Q6UX04 472 aaKnown RBP24.26■■□□□ 1.47
PHTF1-212ENST00000493212 SCLYQ96I15 445 aa24.26■■□□□ 1.47
PHTF1-212ENST00000493212 YBX2Q9Y2T7 364 aaKnown RBP24.26■■□□□ 1.47
PHTF1-212ENST00000493212 TNKSO95271 1327 aa24.26■■□□□ 1.47
PHTF1-212ENST00000493212 ARIH2O95376 493 aa24.25■■□□□ 1.47
PHTF1-212ENST00000493212 MYL3P08590 195 aa24.25■■□□□ 1.47
PHTF1-212ENST00000493212 SUPT20HL2P0C7V6 817 aa24.25■■□□□ 1.47
PHTF1-212ENST00000493212 CYP2C9P11712 490 aa24.25■■□□□ 1.47
PHTF1-212ENST00000493212 USH1GQ495M9 461 aa24.25■■□□□ 1.47
PHTF1-212ENST00000493212 CCDC178Q5BJE1 867 aa24.25■■□□□ 1.47
PHTF1-212ENST00000493212 IQCA1Q86XH1 822 aa24.25■■□□□ 1.47
PHTF1-212ENST00000493212 RPUSD2Q8IZ73 545 aaKnown RBP24.25■■□□□ 1.47
PHTF1-212ENST00000493212 COPS5Q92905 334 aa24.25■■□□□ 1.47
PHTF1-212ENST00000493212 MPHOSPH6Q99547 160 aaKnown RBP24.25■■□□□ 1.47
PHTF1-212ENST00000493212 DSCC1Q9BVC3 393 aa24.25■■□□□ 1.47
PHTF1-212ENST00000493212 PRDM12Q9H4Q4 367 aa24.25■■□□□ 1.47
PHTF1-212ENST00000493212 MSRAQ9UJ68 235 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms