RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 SLC4A7Q9Y6M7 1214 aa16.23■□□□□ 0.19
SAMM50-204ENST00000493161 RFXAPO00287 272 aa16.22■□□□□ 0.19
SAMM50-204ENST00000493161 NFIBO00712 420 aa16.22■□□□□ 0.19
SAMM50-204ENST00000493161 DUSP28Q4G0W2 176 aa16.22■□□□□ 0.19
SAMM50-204ENST00000493161 NECAB3Q96P71 396 aaPredicted RBP16.22■□□□□ 0.19
SAMM50-204ENST00000493161 VTA1Q9NP79 307 aa16.22■□□□□ 0.19
SAMM50-204ENST00000493161 XIRP2A4UGR9 3374 aa16.21■□□□□ 0.19
SAMM50-204ENST00000493161 TTC41PQ6P2S7 1318 aa16.21■□□□□ 0.19
SAMM50-204ENST00000493161 ZBBXA8MT70 800 aa16.21■□□□□ 0.19
SAMM50-204ENST00000493161 RANBP6O60518 1105 aaKnown RBP16.21■□□□□ 0.19
SAMM50-204ENST00000493161 ICAM1P05362 532 aa16.21■□□□□ 0.19
SAMM50-204ENST00000493161 NOVP48745 357 aa16.21■□□□□ 0.19
SAMM50-204ENST00000493161 ALDH5A1P51649 535 aaPredicted RBP16.21■□□□□ 0.19
SAMM50-204ENST00000493161 CCDC96Q2M329 555 aa16.21■□□□□ 0.19
SAMM50-204ENST00000493161 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.19
SAMM50-204ENST00000493161 PPP2R2DQ66LE6 453 aa16.21■□□□□ 0.19
SAMM50-204ENST00000493161 DEFB128Q7Z7B8 93 aa16.21■□□□□ 0.19
SAMM50-204ENST00000493161 MICALL1Q8N3F8 863 aa16.21■□□□□ 0.19
SAMM50-204ENST00000493161 UHRF1Q96T88 793 aaPredicted RBP16.21■□□□□ 0.19
SAMM50-204ENST00000493161 WDR11Q9BZH6 1224 aa16.21■□□□□ 0.19
SAMM50-204ENST00000493161 RANBP17Q9H2T7 1088 aaKnown RBP16.21■□□□□ 0.19
SAMM50-204ENST00000493161 PCDHB15Q9Y5E8 787 aa16.21■□□□□ 0.19
SAMM50-204ENST00000493161 MYO9BQ13459 2157 aa16.21■□□□□ 0.19
SAMM50-204ENST00000493161 FRMPD2Q68DX3 1309 aaPredicted RBP16.2■□□□□ 0.18
SAMM50-204ENST00000493161 RBAK-RBAKDNI3L0D1 243 aa16.2■□□□□ 0.18
SAMM50-204ENST00000493161 MYL3P08590 195 aa16.2■□□□□ 0.18
SAMM50-204ENST00000493161 ATP2A2P16615 1042 aaKnown RBP16.2■□□□□ 0.18
SAMM50-204ENST00000493161 PURAQ00577 322 aaKnown RBP16.2■□□□□ 0.18
SAMM50-204ENST00000493161 TFF2Q03403 129 aa16.2■□□□□ 0.18
SAMM50-204ENST00000493161 SLC30A10Q6XR72 485 aa16.2■□□□□ 0.18
SAMM50-204ENST00000493161 RPUSD2Q8IZ73 545 aaKnown RBP16.2■□□□□ 0.18
SAMM50-204ENST00000493161 CERS4Q9HA82 394 aa16.2■□□□□ 0.18
SAMM50-204ENST00000493161 GPCPD1Q9NPB8 672 aa16.2■□□□□ 0.18
SAMM50-204ENST00000493161 PCDHA11Q9Y5I1 949 aa16.2■□□□□ 0.18
SAMM50-204ENST00000493161 TNKSO95271 1327 aa16.19■□□□□ 0.18
SAMM50-204ENST00000493161 EPOPA6NHQ4 379 aa16.19■□□□□ 0.18
SAMM50-204ENST00000493161 ERC2O15083 957 aa16.19■□□□□ 0.18
SAMM50-204ENST00000493161 ARHGEF15O94989 841 aa16.19■□□□□ 0.18
SAMM50-204ENST00000493161 CLEC4DQ8WXI8 215 aa16.19■□□□□ 0.18
SAMM50-204ENST00000493161 COPS5Q92905 334 aa16.19■□□□□ 0.18
SAMM50-204ENST00000493161 SEZ6LQ9BYH1 1024 aa16.19■□□□□ 0.18
SAMM50-204ENST00000493161 SCN5AQ14524 2016 aa16.19■□□□□ 0.18
SAMM50-204ENST00000493161 RBM47A0AV96 593 aaKnown RBP16.18■□□□□ 0.18
SAMM50-204ENST00000493161 PTPDC1A2A3K4 754 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 CA3P07451 260 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 BMP1P13497 986 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 MX1P20591 662 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 CALML3P27482 149 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 NBPF20Q3BBV1 942 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 PPP4R3BQ5MIZ7 849 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 SYDE2Q5VT97 1194 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 KRT40Q6A162 431 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 BTNL9Q6UXG8 535 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 DCAF4Q8WV16 495 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 TMEM47Q9BQJ4 181 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 ANAPC4Q9UJX5 808 aa16.18■□□□□ 0.18
SAMM50-204ENST00000493161 ORC4O43929 436 aa16.17■□□□□ 0.18
SAMM50-204ENST00000493161 FGRP09769 529 aa16.17■□□□□ 0.18
SAMM50-204ENST00000493161 KCNQ1P51787 676 aa16.17■□□□□ 0.18
SAMM50-204ENST00000493161 OR6J1Q8NGC5 347 aa16.17■□□□□ 0.18
SAMM50-204ENST00000493161 MTG1Q9BT17 334 aaPredicted RBP16.17■□□□□ 0.18
SAMM50-204ENST00000493161 POLR3EQ9NVU0 708 aa16.17■□□□□ 0.18
SAMM50-204ENST00000493161 ADD3Q9UEY8 706 aaKnown RBP16.17■□□□□ 0.18
SAMM50-204ENST00000493161 SALL3Q9BXA9 1300 aa16.17■□□□□ 0.18
SAMM50-204ENST00000493161 SUPT20HL2P0C7V6 817 aa16.16■□□□□ 0.18
SAMM50-204ENST00000493161 CPT1AP50416 773 aa16.16■□□□□ 0.18
SAMM50-204ENST00000493161 FAM47CQ5HY64 1035 aa16.16■□□□□ 0.18
SAMM50-204ENST00000493161 TMEM67Q5HYA8 995 aa16.16■□□□□ 0.18
SAMM50-204ENST00000493161 RRP12Q5JTH9 1297 aaKnown RBP16.16■□□□□ 0.18
SAMM50-204ENST00000493161 SPRED2Q7Z698 418 aa16.16■□□□□ 0.18
SAMM50-204ENST00000493161 TOMM22Q9NS69 142 aa16.16■□□□□ 0.18
SAMM50-204ENST00000493161 MTCH2Q9Y6C9 303 aa16.16■□□□□ 0.18
SAMM50-204ENST00000493161 TCF20Q9UGU0 1960 aaKnown RBP16.16■□□□□ 0.18
SAMM50-204ENST00000493161 TRANK1O15050 2925 aa16.15■□□□□ 0.18
SAMM50-204ENST00000493161 PFKMP08237 780 aa16.15■□□□□ 0.18
SAMM50-204ENST00000493161 PDHBP11177 359 aa16.15■□□□□ 0.18
SAMM50-204ENST00000493161 RNF207Q6ZRF8 634 aa16.15■□□□□ 0.18
SAMM50-204ENST00000493161 IL27Q8NEV9 243 aa16.15■□□□□ 0.18
SAMM50-204ENST00000493161 FAM227BQ96M60 508 aa16.15■□□□□ 0.18
SAMM50-204ENST00000493161 ARIH2O95376 493 aa16.14■□□□□ 0.17
SAMM50-204ENST00000493161 FGAP02671 866 aa16.14■□□□□ 0.17
SAMM50-204ENST00000493161 IQCF3P0C7M6 154 aa16.14■□□□□ 0.17
SAMM50-204ENST00000493161 TOP1P11387 765 aaKnown RBP16.14■□□□□ 0.17
SAMM50-204ENST00000493161 EDNRBP24530 442 aa16.14■□□□□ 0.17
SAMM50-204ENST00000493161 RPS6P62753 249 aaKnown RBP16.14■□□□□ 0.17
SAMM50-204ENST00000493161 PDE4DQ08499 809 aa16.14■□□□□ 0.17
SAMM50-204ENST00000493161 SKIV2LQ15477 1246 aaKnown RBP16.14■□□□□ 0.17
SAMM50-204ENST00000493161 ALX1Q15699 326 aa16.14■□□□□ 0.17
SAMM50-204ENST00000493161 TSPYL2Q9H2G4 693 aaPredicted RBP16.14■□□□□ 0.17
SAMM50-204ENST00000493161 CPVLQ9H3G5 476 aa16.14■□□□□ 0.17
SAMM50-204ENST00000493161 GPHNQ9NQX3 736 aaPredicted RBP16.14■□□□□ 0.17
SAMM50-204ENST00000493161 SCN10AQ9Y5Y9 1956 aa16.14■□□□□ 0.17
SAMM50-204ENST00000493161 BDP1A6H8Y1 2624 aa16.13■□□□□ 0.17
SAMM50-204ENST00000493161 A0A0D9SFI3 127 aa16.13■□□□□ 0.17
SAMM50-204ENST00000493161 A6NJR5 290 aa16.13■□□□□ 0.17
SAMM50-204ENST00000493161 CHMP4BP1P59074 171 aa16.13■□□□□ 0.17
SAMM50-204ENST00000493161 HAND2P61296 217 aa16.13■□□□□ 0.17
SAMM50-204ENST00000493161 TAP1Q03518 808 aa16.13■□□□□ 0.17
SAMM50-204ENST00000493161 PPP2R5BQ15173 497 aa16.13■□□□□ 0.17
SAMM50-204ENST00000493161 CTAGE1Q96RT6 745 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms