RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 POLR2MP0CAP2 368 aa16.13■□□□□ 0.17
CCM2-217ENST00000492883 FUT2Q10981 343 aa16.13■□□□□ 0.17
CCM2-217ENST00000492883 ARMCX2Q7L311 632 aa16.13■□□□□ 0.17
CCM2-217ENST00000492883 HEATR3Q7Z4Q2 680 aa16.13■□□□□ 0.17
CCM2-217ENST00000492883 SYTL5Q8TDW5 730 aaPredicted RBP16.13■□□□□ 0.17
CCM2-217ENST00000492883 FGD4Q96M96 766 aa16.13■□□□□ 0.17
CCM2-217ENST00000492883 MPHOSPH6Q99547 160 aaKnown RBP16.13■□□□□ 0.17
CCM2-217ENST00000492883 BACH2Q9BYV9 841 aa16.13■□□□□ 0.17
CCM2-217ENST00000492883 SLKQ9H2G2 1235 aaPredicted RBP16.13■□□□□ 0.17
CCM2-217ENST00000492883 PAK6Q9NQU5 681 aaPredicted RBP16.13■□□□□ 0.17
CCM2-217ENST00000492883 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.13■□□□□ 0.17
CCM2-217ENST00000492883 TPCN1Q9ULQ1 816 aa16.13■□□□□ 0.17
CCM2-217ENST00000492883 CNTNAP5Q8WYK1 1306 aa16.13■□□□□ 0.17
CCM2-217ENST00000492883 SYNGAP1Q96PV0 1343 aa16.13■□□□□ 0.17
CCM2-217ENST00000492883 B4DLN1 442 aa16.12■□□□□ 0.17
CCM2-217ENST00000492883 SGPL1O95470 568 aa16.12■□□□□ 0.17
CCM2-217ENST00000492883 SNAI1O95863 264 aaPredicted RBP16.12■□□□□ 0.17
CCM2-217ENST00000492883 TFRCP02786 760 aaKnown RBP16.12■□□□□ 0.17
CCM2-217ENST00000492883 CYBAP13498 195 aa16.12■□□□□ 0.17
CCM2-217ENST00000492883 EN2P19622 333 aaPredicted RBP16.12■□□□□ 0.17
CCM2-217ENST00000492883 MRPL12P52815 198 aaKnown RBP16.12■□□□□ 0.17
CCM2-217ENST00000492883 IFFO2Q5TF58 517 aa16.12■□□□□ 0.17
CCM2-217ENST00000492883 CPLX2Q6PUV4 134 aaKnown RBP16.12■□□□□ 0.17
CCM2-217ENST00000492883 SAMD3Q8N6K7 520 aa16.12■□□□□ 0.17
CCM2-217ENST00000492883 TRPV1Q8NER1 839 aa16.12■□□□□ 0.17
CCM2-217ENST00000492883 DNERQ8NFT8 737 aa16.12■□□□□ 0.17
CCM2-217ENST00000492883 U2AF1L4Q8WU68 220 aaKnown RBP16.12■□□□□ 0.17
CCM2-217ENST00000492883 KIF2CQ99661 725 aa16.12■□□□□ 0.17
CCM2-217ENST00000492883 MAP3K20Q9NYL2 800 aaKnown RBP16.12■□□□□ 0.17
CCM2-217ENST00000492883 NRBP1Q9UHY1 535 aa16.12■□□□□ 0.17
CCM2-217ENST00000492883 COL11A1P12107 1806 aaPredicted RBP16.12■□□□□ 0.17
CCM2-217ENST00000492883 OPLAHO14841 1288 aa16.11■□□□□ 0.17
CCM2-217ENST00000492883 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
CCM2-217ENST00000492883 HOXA13P31271 388 aaPredicted RBP16.11■□□□□ 0.17
CCM2-217ENST00000492883 GJA8P48165 433 aa16.11■□□□□ 0.17
CCM2-217ENST00000492883 ALDH5A1P51649 535 aaPredicted RBP16.11■□□□□ 0.17
CCM2-217ENST00000492883 HSD17B4P51659 736 aa16.11■□□□□ 0.17
CCM2-217ENST00000492883 GPKOWQ92917 476 aaPredicted RBP eCLIP16.11■□□□□ 0.17
CCM2-217ENST00000492883 CUL5Q93034 780 aa16.11■□□□□ 0.17
CCM2-217ENST00000492883 PHKBQ93100 1093 aa16.11■□□□□ 0.17
CCM2-217ENST00000492883 TAAR1Q96RJ0 339 aa16.11■□□□□ 0.17
CCM2-217ENST00000492883 SLC26A6Q9BXS9 759 aa16.11■□□□□ 0.17
CCM2-217ENST00000492883 ABHD16BQ9H3Z7 469 aa16.11■□□□□ 0.17
CCM2-217ENST00000492883 RBM27Q9P2N5 1060 aaKnown RBP16.11■□□□□ 0.17
CCM2-217ENST00000492883 DDX20Q9UHI6 824 aaKnown RBP16.11■□□□□ 0.17
CCM2-217ENST00000492883 ZHX1Q9UKY1 873 aaPredicted RBP16.11■□□□□ 0.17
CCM2-217ENST00000492883 NID2Q14112 1375 aa16.11■□□□□ 0.17
CCM2-217ENST00000492883 SEPT4O43236 478 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 PRPF3O43395 683 aaKnown RBP16.1■□□□□ 0.17
CCM2-217ENST00000492883 MSCO60682 206 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 IFNAR1P17181 557 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 PDE4DQ08499 809 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 SSRP1Q08945 709 aaKnown RBP16.1■□□□□ 0.17
CCM2-217ENST00000492883 ACVR2BQ13705 512 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 NTRK3Q16288 839 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 ARHGEF16Q5VV41 709 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 EEPD1Q7L9B9 569 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 FCHSD1Q86WN1 690 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 TRIM22Q8IYM9 498 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 SMARCC2Q8TAQ2 1214 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 NSUN6Q8TEA1 469 aaKnown RBP16.1■□□□□ 0.17
CCM2-217ENST00000492883 RMDN3Q96TC7 470 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 PSTPIP2Q9H939 334 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 COL20A1Q9P218 1284 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 DDX49Q9Y6V7 483 aaKnown RBP16.1■□□□□ 0.17
CCM2-217ENST00000492883 ASTN1O14525 1302 aa16.1■□□□□ 0.17
CCM2-217ENST00000492883 LOC102724159A0A0B4J2E5 919 aa16.09■□□□□ 0.17
CCM2-217ENST00000492883 PFKFB2O60825 505 aa16.09■□□□□ 0.17
CCM2-217ENST00000492883 ZNF865P0CJ78 1059 aaPredicted RBP16.09■□□□□ 0.17
CCM2-217ENST00000492883 NAPAP54920 295 aa16.09■□□□□ 0.17
CCM2-217ENST00000492883 SCRN1Q12765 414 aa16.09■□□□□ 0.17
CCM2-217ENST00000492883 PWP2Q15269 919 aaKnown RBP16.09■□□□□ 0.17
CCM2-217ENST00000492883 RABEP1Q15276 862 aa16.09■□□□□ 0.17
CCM2-217ENST00000492883 PFKFB3Q16875 520 aaPredicted RBP16.09■□□□□ 0.17
CCM2-217ENST00000492883 ANO1Q5XXA6 986 aa16.09■□□□□ 0.17
CCM2-217ENST00000492883 WWC2Q6AWC2 1192 aa16.09■□□□□ 0.17
CCM2-217ENST00000492883 TBC1D32Q96NH3 1257 aa16.09■□□□□ 0.17
CCM2-217ENST00000492883 RNF26Q9BY78 433 aaPredicted RBP16.09■□□□□ 0.17
CCM2-217ENST00000492883 FAM184BQ9ULE4 1060 aa16.09■□□□□ 0.17
CCM2-217ENST00000492883 LIMCH1Q9UPQ0 1083 aa16.09■□□□□ 0.17
CCM2-217ENST00000492883 PLXNB2O15031 1838 aa16.09■□□□□ 0.17
CCM2-217ENST00000492883 ZNF236Q9UL36 1845 aa16.09■□□□□ 0.17
CCM2-217ENST00000492883 hCG_1984214I3L0E3 225 aa16.08■□□□□ 0.16
CCM2-217ENST00000492883 CDKL5O76039 1030 aa16.08■□□□□ 0.16
CCM2-217ENST00000492883 SCG2P13521 617 aa16.08■□□□□ 0.16
CCM2-217ENST00000492883 AKR1A1P14550 325 aa16.08■□□□□ 0.16
CCM2-217ENST00000492883 CAPN2P17655 700 aa16.08■□□□□ 0.16
CCM2-217ENST00000492883 GHRHRQ02643 423 aa16.08■□□□□ 0.16
CCM2-217ENST00000492883 ME3Q16798 604 aa16.08■□□□□ 0.16
CCM2-217ENST00000492883 LHX8Q68G74 356 aa16.08■□□□□ 0.16
CCM2-217ENST00000492883 ZNF713Q8N859 430 aaPredicted RBP16.08■□□□□ 0.16
CCM2-217ENST00000492883 NECAB1Q8N987 351 aa16.08■□□□□ 0.16
CCM2-217ENST00000492883 BARHL2Q9NY43 387 aa16.08■□□□□ 0.16
CCM2-217ENST00000492883 SMCO2A6NFE2 343 aa16.07■□□□□ 0.16
CCM2-217ENST00000492883 RARBP10826 455 aa16.07■□□□□ 0.16
CCM2-217ENST00000492883 EIF2AK2P19525 551 aaKnown RBP16.07■□□□□ 0.16
CCM2-217ENST00000492883 USP17L6PQ6QN14 398 aa16.07■□□□□ 0.16
CCM2-217ENST00000492883 MORC4Q8TE76 937 aa16.07■□□□□ 0.16
CCM2-217ENST00000492883 IWS1Q96ST2 819 aa16.07■□□□□ 0.16
CCM2-217ENST00000492883 CRISPLD2Q9H0B8 497 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms