RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 PIGSQ96S52 555 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 C11orf49Q9H6J7 331 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 RBM28Q9NW13 759 aaKnown RBP12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 MAP3K20Q9NYL2 800 aaKnown RBP12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 ZHX1Q9UKY1 873 aaPredicted RBP12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 FAM184BQ9ULE4 1060 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 PCDHA1Q9Y5I3 950 aa12.36□□□□□ -0.43
CDC42SE1-206ENST00000492796 B4DLN1 442 aa12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 DNM1LO00429 736 aa12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 ZBTB43O43298 467 aa12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 PPP1R11O60927 126 aaPredicted RBP12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 RPS6KB1P23443 525 aa12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 CALML3P27482 149 aa12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 MRPL12P52815 198 aaKnown RBP12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 GHRHRQ02643 423 aa12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 TMTC3Q6ZXV5 915 aa12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 FANCBQ8NB91 859 aa12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 DIS3LQ8TF46 1054 aaKnown RBP12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 RRP36Q96EU6 259 aaKnown RBP12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 TCEANC2Q96MN5 208 aa12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 KATNBL1Q9H079 304 aa12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 XPNPEP3Q9NQH7 507 aa12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 SEC63Q9UGP8 760 aaKnown RBP12.35□□□□□ -0.43
CDC42SE1-206ENST00000492796 NID2Q14112 1375 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 KLF18A0A0U1RQI7 1052 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 KBTBD13C9JR72 458 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 PLEKHA8P1O95397 391 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 COL6A1P12109 1028 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 RXRAP19793 462 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 CASTP20810 708 aaKnown RBP12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 PPP2R5BQ15173 497 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 Q6ZUG5 572 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 SRBD1Q8N5C6 995 aaKnown RBP12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 AGXT2Q9BYV1 514 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 TM6SF1Q9BZW5 370 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 VTA1Q9NP79 307 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 BRPF3Q9ULD4 1205 aa12.34□□□□□ -0.43
CDC42SE1-206ENST00000492796 ALPK3Q96L96 1907 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 GOLGA8AA7E2F4 631 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 GOLGA8BA8MQT2 603 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 DUSP11O75319 330 aaKnown RBP12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 CPA1P15085 419 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 EDNRBP24530 442 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 HSD17B4P51659 736 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 ANAPC15P60006 121 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 RTN1Q16799 776 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 CCDC144BQ3MJ40 725 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 PRPF38BQ5VTL8 546 aaKnown RBP12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 ANO1Q5XXA6 986 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 RUFY3Q7L099 469 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 RNF180Q86T96 592 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 SYTL5Q8TDW5 730 aaPredicted RBP12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 PURBQ96QR8 312 aaKnown RBP12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 SYNRGQ9UMZ2 1314 aa12.33□□□□□ -0.44
CDC42SE1-206ENST00000492796 CCDC196A0A1B0GTZ2 297 aa12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 OPLAHO14841 1288 aa12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 ADAMTS4O75173 837 aa12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 CFBP00751 764 aa12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 METAP2P50579 478 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 PDE4DQ08499 809 aa12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 LRRC41Q15345 812 aa12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 GJC2Q5T442 439 aaPredicted RBP12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 RAB11FIP4Q86YS3 637 aa12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 FBXO16Q8IX29 292 aaPredicted RBP12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 NSUN6Q8TEA1 469 aaKnown RBP12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 BRF1Q92994 677 aa12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 SPC25Q9HBM1 224 aa12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 CYP46A1Q9Y6A2 500 aa12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 BAZ2BQ9UIF8 2168 aaKnown RBP12.32□□□□□ -0.44
CDC42SE1-206ENST00000492796 GCOM1H8Y6P7 765 aaPredicted RBP12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 hCG_1984214I3L0E3 225 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 POLR2MP0CAP2 368 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 CST5P28325 142 aaPredicted RBP12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 GJA9P57773 515 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 TNFAIP2Q03169 654 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 APOBRQ0VD83 1088 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 IQSEC1Q6DN90 963 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 TAPT1Q6NXT6 567 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 CMTR1Q8N1G2 835 aaKnown RBP12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 ZNF713Q8N859 430 aaPredicted RBP12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 PIBF1Q8WXW3 757 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 TBC1D5Q92609 795 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 DPF3Q92784 378 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 LENG1Q96BZ8 264 aaPredicted RBP12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 IWS1Q96ST2 819 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 RMDN3Q96TC7 470 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 UPF3AQ9H1J1 476 aaKnown RBP12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 COL20A1Q9P218 1284 aa12.31□□□□□ -0.44
CDC42SE1-206ENST00000492796 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 RBM47A0AV96 593 aaKnown RBP12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 MOXD2PA6NHM9 499 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 ADCY6O43306 1168 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 EVI5O60447 810 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 PGK1P00558 417 aa12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
CDC42SE1-206ENST00000492796 ADCYAP1R1P41586 468 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms