RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SEC23AQ15436 765 aa9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 TMEM63BQ5T3F8 832 aa9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 TTC22Q5TAA0 569 aa9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 NSMFQ6X4W1 530 aa9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 RNF207Q6ZRF8 634 aa9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 IQCA1Q86XH1 822 aa9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 ENAHQ8N8S7 591 aaPredicted RBP9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 PNMA1Q8ND90 353 aa9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 DNERQ8NFT8 737 aa9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 ZSCAN10Q96SZ4 725 aaPredicted RBP9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 SEMA6BQ9H3T3 888 aa9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 DIAPH3Q9NSV4 1193 aa9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 SUPT16HQ9Y5B9 1047 aaKnown RBP9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 KIAA1217Q5T5P2 1943 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 TMEM265A0A087WTH1 108 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 B4E1Z4 1266 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 DYNC1LI2O43237 492 aaPredicted RBP9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 PTGS1P23219 599 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 RPS6P62753 249 aaKnown RBP9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 BEX3Q00994 111 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 ITGA7Q13683 1181 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 IMMTQ16891 758 aaKnown RBP9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 CXCL17Q6UXB2 119 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 SLC30A10Q6XR72 485 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 FBXO16Q8IX29 292 aaPredicted RBP9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 MTMR8Q96EF0 704 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 ZKSCAN3Q9BRR0 538 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 KRT23Q9C075 422 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 AP5M1Q9H0R1 490 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 TTYH1Q9H313 450 aaPredicted RBP9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 CNNM2Q9H8M5 875 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 ISY1Q9ULR0 285 aaKnown RBP9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 MTMR7Q9Y216 660 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 RAD50Q92878 1312 aa9.82□□□□□ -0.84
SMARCB1-207ENST00000491967 BAZ2BQ9UIF8 2168 aaKnown RBP9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 PTPDC1A2A3K4 754 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 A6NJR5 290 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 NKRFO15226 690 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 ZEB2O60315 1214 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 GOLGA8HP0CJ92 632 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 CHMLP26374 656 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 ASPRV1Q53RT3 343 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 TMEM240Q5SV17 173 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 CCDC62Q6P9F0 684 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 KIAA1211Q6ZU35 1233 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 EEPD1Q7L9B9 569 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 ADGRF4Q8IZF3 695 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 VWCEQ96DN2 955 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 WDR11Q9BZH6 1224 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 UBA5Q9GZZ9 404 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 CPVLQ9H3G5 476 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 JMJD4Q9H9V9 463 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 TNKSO95271 1327 aa9.81□□□□□ -0.84
SMARCB1-207ENST00000491967 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 PALM3A6NDB9 673 aaPredicted RBP9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 OPLAHO14841 1288 aa9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 CSF2RAP15509 400 aa9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 CALML3P27482 149 aa9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 PURAQ00577 322 aaKnown RBP9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 PPIGQ13427 754 aaKnown RBP eCLIP9.8□□□□□ -0.843e-8■□□□□ 8.3
SMARCB1-207ENST00000491967 CDC37Q16543 378 aaPredicted RBP9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 ZNF697Q5TEC3 545 aa9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 NOL8Q76FK4 1167 aaKnown RBP9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 CYB5R4Q7L1T6 521 aa9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 SAMD3Q8N6K7 520 aa9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 SYTL5Q8TDW5 730 aaPredicted RBP9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 SCFD2Q8WU76 684 aa9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 TBC1D5Q92609 795 aa9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 RNPC3Q96LT9 517 aaKnown RBP9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 CDX2Q99626 313 aaPredicted RBP9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 KAT14Q9H8E8 782 aa9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 COL20A1Q9P218 1284 aa9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 ABCB11O95342 1321 aa9.8□□□□□ -0.84
SMARCB1-207ENST00000491967 B4DLN1 442 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 TLR3O15455 904 aaKnown RBP9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 SGSM2O43147 1006 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 B4GALT4O60513 344 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 KPNA6O60684 536 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 CYP21A2P08686 494 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 PARP1P09874 1014 aaKnown RBP9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 HSD17B4P51659 736 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 MRPL12P52815 198 aaKnown RBP9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 PTH1RQ03431 593 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 SLC35G1Q2M3R5 365 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 QRICH1Q2TAL8 776 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 STAG2Q8N3U4 1231 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 TMEM199Q8N511 208 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 NSUN6Q8TEA1 469 aaKnown RBP9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 HERVK_113Q902F9 699 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 MAP4K1Q92918 833 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 VTI1AQ96AJ9 217 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 IWS1Q96ST2 819 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 NOC4LQ9BVI4 516 aaKnown RBP9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 TRPV6Q9H1D0 765 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 ALDH8A1Q9H2A2 487 aaPredicted RBP9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 POLR3EQ9NVU0 708 aa9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 MAP3K20Q9NYL2 800 aaKnown RBP9.79□□□□□ -0.84
SMARCB1-207ENST00000491967 MAD2L2Q9UI95 211 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms