RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 EPHB4P54760 987 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 GJA9P57773 515 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 WTAPQ15007 396 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 TMEM67Q5HYA8 995 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 BLOC1S2Q6QNY1 142 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 CHST3Q7LGC8 479 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 FBXL16Q8N461 479 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 PNMA1Q8ND90 353 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 NUP133Q8WUM0 1156 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 DCAF4Q8WV16 495 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 CHMP4CQ96CF2 233 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 LY9Q9HBG7 655 aa17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 ISY1Q9ULR0 285 aaKnown RBP17.51■□□□□ 0.39
CDC42SE1-205ENST00000491825 ELP1O95163 1332 aa17.5■□□□□ 0.39
CDC42SE1-205ENST00000491825 PDHBP11177 359 aa17.5■□□□□ 0.39
CDC42SE1-205ENST00000491825 RPS6KB1P23443 525 aa17.5■□□□□ 0.39
CDC42SE1-205ENST00000491825 SNAP25P60880 206 aa17.5■□□□□ 0.39
CDC42SE1-205ENST00000491825 IKQ13123 557 aaPredicted RBP17.5■□□□□ 0.39
CDC42SE1-205ENST00000491825 MUM1L1Q5H9M0 696 aa17.5■□□□□ 0.39
CDC42SE1-205ENST00000491825 TMTC2Q8N394 836 aa17.5■□□□□ 0.39
CDC42SE1-205ENST00000491825 TRERF1Q96PN7 1200 aa17.5■□□□□ 0.39
CDC42SE1-205ENST00000491825 ZSWIM6Q9HCJ5 1215 aa17.5■□□□□ 0.39
CDC42SE1-205ENST00000491825 TBX21Q9UL17 535 aa17.5■□□□□ 0.39
CDC42SE1-205ENST00000491825 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 ASGR1P07306 291 aa17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 C6orf222P0C671 652 aaPredicted RBP17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 ALAS1P13196 640 aa17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 CASTP20810 708 aaKnown RBP17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 CDK7P50613 346 aa17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 CCDC174Q6PII3 467 aa17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 BTNL9Q6UXG8 535 aa17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 SGMS1Q86VZ5 419 aa17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 BACH2Q9BYV9 841 aa17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 RANBP17Q9H2T7 1088 aaKnown RBP17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 DDX49Q9Y6V7 483 aaKnown RBP17.49■□□□□ 0.39
CDC42SE1-205ENST00000491825 LRRC37A2A6NM11 1700 aa17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 ICAM1P05362 532 aa17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 RAG1P15918 1043 aa17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 RBM25P49756 843 aaKnown RBP17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 SMAD3P84022 425 aaKnown RBP17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 TTBK2Q6IQ55 1244 aa17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 RUFY3Q7L099 469 aa17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 PCSK9Q8NBP7 692 aaKnown RBP17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 GLT1D1Q96MS3 346 aa17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 AGXT2Q9BYV1 514 aa17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 TMEM39AQ9NV64 488 aa17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 CYP39A1Q9NYL5 469 aa17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 GNEQ9Y223 722 aaKnown RBP17.48■□□□□ 0.39
CDC42SE1-205ENST00000491825 ASB14A6NK59 587 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 DCDC2CA8MYV0 355 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 DDAH1O94760 285 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 ZNF543Q08ER8 600 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 TROAPQ12815 778 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 CCDC96Q2M329 555 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 GPATCH4Q5T3I0 446 aaKnown RBP17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 ZNF697Q5TEC3 545 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 MORC4Q8TE76 937 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 FAM161BQ96MY7 647 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 MAP3K14Q99558 947 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 SPC25Q9HBM1 224 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 SENP2Q9HC62 589 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 CCPG1Q9ULG6 757 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 MTMR7Q9Y216 660 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
CDC42SE1-205ENST00000491825 VCANP13611 3396 aa17.46■□□□□ 0.39
CDC42SE1-205ENST00000491825 PTGS1P23219 599 aa17.46■□□□□ 0.39
CDC42SE1-205ENST00000491825 SLC16A2P36021 539 aa17.46■□□□□ 0.39
CDC42SE1-205ENST00000491825 TNFAIP2Q03169 654 aa17.46■□□□□ 0.39
CDC42SE1-205ENST00000491825 FPGSQ05932 587 aa17.46■□□□□ 0.39
CDC42SE1-205ENST00000491825 ASPRV1Q53RT3 343 aa17.46■□□□□ 0.39
CDC42SE1-205ENST00000491825 GNASQ5JWF2 1037 aa17.46■□□□□ 0.39
CDC42SE1-205ENST00000491825 CATIPQ7Z7H3 387 aa17.46■□□□□ 0.39
CDC42SE1-205ENST00000491825 PURBQ96QR8 312 aaKnown RBP17.46■□□□□ 0.39
CDC42SE1-205ENST00000491825 C22orf23Q9BZE7 217 aa17.46■□□□□ 0.39
CDC42SE1-205ENST00000491825 TTYH1Q9H313 450 aaPredicted RBP17.46■□□□□ 0.39
CDC42SE1-205ENST00000491825 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
CDC42SE1-205ENST00000491825 MROH7Q68CQ1 1323 aa17.46■□□□□ 0.38
CDC42SE1-205ENST00000491825 A0A0U1RQG5 324 aaPredicted RBP17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 ARVCFO00192 962 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 TIMP1P01033 207 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 CPA1P15085 419 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 RCAN1P53805 252 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 SYDE2Q5VT97 1194 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 TAPT1Q6NXT6 567 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 TLK2Q86UE8 772 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 FAM126BQ8IXS8 530 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 ZNF654Q8IZM8 581 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 SLC43A3Q8NBI5 491 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 RNPC3Q96LT9 517 aaKnown RBP17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 TCEANC2Q96MN5 208 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 LRRC2Q9BYS8 371 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 PDGFCQ9NRA1 345 aa17.45■□□□□ 0.38
CDC42SE1-205ENST00000491825 MCM3APO60318 1980 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 NID2Q14112 1375 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 CCDC69A6NI79 296 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 DLL1O00548 723 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 NFIBO00712 420 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 CALM1P0DP23 149 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 CALM2P0DP24 149 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms