RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 RNF207Q6ZRF8 634 aa14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 BADQ92934 168 aa14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 JMJD4Q9H9V9 463 aa14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 STARD7Q9NQZ5 370 aa14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 E7EWF7 191 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 OPLAHO14841 1288 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 KIAA0355O15063 1070 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 PPP1R11O60927 126 aaPredicted RBP14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 PARP1P09874 1014 aaKnown RBP14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 EDNRBP24530 442 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 EPHB4P54760 987 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 ANTXR2P58335 489 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 QRICH1Q2TAL8 776 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 IFIT1BQ5T764 474 aaKnown RBP14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 TOX2Q96NM4 488 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 LBHD1Q9BQE6 289 aaPredicted RBP14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 VTA1Q9NP79 307 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 COL20A1Q9P218 1284 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 MAD2L2Q9UI95 211 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 GRIN2DO15399 1336 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 ELP1O95163 1332 aa14.82□□□□□ -0.04
SEC61A1-206ENST00000491668 A0A0C4DFX4 3053 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 RBM47A0AV96 593 aaKnown RBP14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 PALM3A6NDB9 673 aaPredicted RBP14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 CLTBP09497 229 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 C9orf50Q5SZB4 431 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 IQSEC1Q6DN90 963 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 KIAA1211Q6ZU35 1233 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 CHST3Q7LGC8 479 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 TLK2Q86UE8 772 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 PCSK9Q8NBP7 692 aaKnown RBP14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 RGS22Q8NE09 1264 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 NUP133Q8WUM0 1156 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 MTMR8Q96EF0 704 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 LSG1Q9H089 658 aaKnown RBP14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 VAT1LQ9HCJ6 419 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 ADD3Q9UEY8 706 aaKnown RBP14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 PRKAG2Q9UGJ0 569 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 TBX21Q9UL17 535 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 PNMA2Q9UL42 364 aa14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 RBM8AQ9Y5S9 174 aaKnown RBP14.81□□□□□ -0.04
SEC61A1-206ENST00000491668 LOC102724159A0A0B4J2E5 919 aa14.8□□□□□ -0.04
SEC61A1-206ENST00000491668 DYNC1LI2O43237 492 aaPredicted RBP14.8□□□□□ -0.04
SEC61A1-206ENST00000491668 PWP2Q15269 919 aaKnown RBP14.8□□□□□ -0.04
SEC61A1-206ENST00000491668 SHHQ15465 462 aa14.8□□□□□ -0.04
SEC61A1-206ENST00000491668 FSCN1Q16658 493 aaKnown RBP14.8□□□□□ -0.04
SEC61A1-206ENST00000491668 DUSP28Q4G0W2 176 aa14.8□□□□□ -0.04
SEC61A1-206ENST00000491668 CXCL17Q6UXB2 119 aa14.8□□□□□ -0.04
SEC61A1-206ENST00000491668 NOL8Q76FK4 1167 aaKnown RBP14.8□□□□□ -0.04
SEC61A1-206ENST00000491668 MB21D2Q8IYB1 491 aaPredicted RBP14.8□□□□□ -0.04
SEC61A1-206ENST00000491668 GLT1D1Q96MS3 346 aa14.8□□□□□ -0.04
SEC61A1-206ENST00000491668 SPC25Q9HBM1 224 aa14.8□□□□□ -0.04
SEC61A1-206ENST00000491668 GPHNQ9NQX3 736 aaPredicted RBP14.8□□□□□ -0.04
SEC61A1-206ENST00000491668 KLRF2D3W0D1 207 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 ABCB11O95342 1321 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 TROAPQ12815 778 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 GRM4Q14833 912 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 CHD9Q3L8U1 2897 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 Q7L0L9 218 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 FAM126BQ8IXS8 530 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 SLC43A3Q8NBI5 491 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 SYTL5Q8TDW5 730 aaPredicted RBP14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 IGDCC4Q8TDY8 1250 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 TAAR1Q96RJ0 339 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 ESYT1Q9BSJ8 1104 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 WDR11Q9BZH6 1224 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 TMEM39AQ9NV64 488 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 Q9Y3F1 56 aa14.79□□□□□ -0.04
SEC61A1-206ENST00000491668 BAZ2BQ9UIF8 2168 aaKnown RBP14.78□□□□□ -0.04
SEC61A1-206ENST00000491668 MYH6P13533 1939 aa14.78□□□□□ -0.04
SEC61A1-206ENST00000491668 ARVCFO00192 962 aa14.78□□□□□ -0.04
SEC61A1-206ENST00000491668 IFIT3O14879 490 aaKnown RBP14.78□□□□□ -0.04
SEC61A1-206ENST00000491668 CYTH3O43739 400 aa14.78□□□□□ -0.04
SEC61A1-206ENST00000491668 CD4P01730 458 aa14.78□□□□□ -0.04
SEC61A1-206ENST00000491668 TRDNQ13061 729 aa14.78□□□□□ -0.04
SEC61A1-206ENST00000491668 GPR153Q6NV75 609 aa14.78□□□□□ -0.04
SEC61A1-206ENST00000491668 FBXO11Q86XK2 927 aa14.78□□□□□ -0.04
SEC61A1-206ENST00000491668 DNERQ8NFT8 737 aa14.78□□□□□ -0.04
SEC61A1-206ENST00000491668 NCOA7Q8NI08 942 aa14.78□□□□□ -0.04
SEC61A1-206ENST00000491668 AP5M1Q9H0R1 490 aa14.78□□□□□ -0.04
SEC61A1-206ENST00000491668 A0A0U1RQG5 324 aaPredicted RBP14.77□□□□□ -0.05
SEC61A1-206ENST00000491668 DCDC2CA8MYV0 355 aa14.77□□□□□ -0.05
SEC61A1-206ENST00000491668 DHX16O60231 1041 aaKnown RBP14.77□□□□□ -0.05
SEC61A1-206ENST00000491668 ARIH2O95376 493 aa14.77□□□□□ -0.05
SEC61A1-206ENST00000491668 PSMC6P62333 389 aa14.77□□□□□ -0.05
SEC61A1-206ENST00000491668 GHRHRQ02643 423 aa14.77□□□□□ -0.05
SEC61A1-206ENST00000491668 PDE4DQ08499 809 aa14.77□□□□□ -0.05
SEC61A1-206ENST00000491668 COPS5Q92905 334 aa14.77□□□□□ -0.05
SEC61A1-206ENST00000491668 VTI1AQ96AJ9 217 aa14.77□□□□□ -0.05
SEC61A1-206ENST00000491668 RIOX1Q9H6W3 641 aa14.77□□□□□ -0.05
SEC61A1-206ENST00000491668 CDH23Q9H251 3354 aa14.76□□□□□ -0.05
SEC61A1-206ENST00000491668 SLC27A2O14975 620 aa14.76□□□□□ -0.05
SEC61A1-206ENST00000491668 ZBTB5O15062 677 aa14.76□□□□□ -0.05
SEC61A1-206ENST00000491668 EIF5BO60841 1220 aaKnown RBP14.76□□□□□ -0.05
SEC61A1-206ENST00000491668 TIMP1P01033 207 aa14.76□□□□□ -0.05
SEC61A1-206ENST00000491668 RAG1P15918 1043 aa14.76□□□□□ -0.05
SEC61A1-206ENST00000491668 HSD17B4P51659 736 aa14.76□□□□□ -0.05
SEC61A1-206ENST00000491668 WTAPQ15007 396 aa14.76□□□□□ -0.05
SEC61A1-206ENST00000491668 NECTIN1Q15223 517 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms