RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 LAMA4Q16363 1823 aa21.55■■□□□ 1.04
SMIM4-205ENST00000491607 WDR19Q8NEZ3 1342 aa21.55■■□□□ 1.04
SMIM4-205ENST00000491607 CABYRO75952 493 aa21.54■■□□□ 1.04
SMIM4-205ENST00000491607 SMAD3P84022 425 aaKnown RBP21.54■■□□□ 1.04
SMIM4-205ENST00000491607 FAM126BQ8IXS8 530 aa21.54■■□□□ 1.04
SMIM4-205ENST00000491607 GUCD1Q96NT3 240 aa21.54■■□□□ 1.04
SMIM4-205ENST00000491607 PPP1R12CQ9BZL4 782 aa21.54■■□□□ 1.04
SMIM4-205ENST00000491607 RPS6P62753 249 aaKnown RBP21.53■■□□□ 1.04
SMIM4-205ENST00000491607 MFSD5Q6N075 450 aa21.53■■□□□ 1.04
SMIM4-205ENST00000491607 MPHOSPH6Q99547 160 aaKnown RBP21.53■■□□□ 1.04
SMIM4-205ENST00000491607 WDR11Q9BZH6 1224 aa21.53■■□□□ 1.04
SMIM4-205ENST00000491607 KRT23Q9C075 422 aa21.53■■□□□ 1.04
SMIM4-205ENST00000491607 ZSWIM5Q9P217 1185 aa21.53■■□□□ 1.04
SMIM4-205ENST00000491607 Q9Y3F1 56 aa21.53■■□□□ 1.04
SMIM4-205ENST00000491607 LCTP09848 1927 aa21.53■■□□□ 1.04
SMIM4-205ENST00000491607 LOC102724159A0A0B4J2E5 919 aa21.52■■□□□ 1.04
SMIM4-205ENST00000491607 PDE4AP27815 886 aa21.52■■□□□ 1.04
SMIM4-205ENST00000491607 PDE4DQ08499 809 aa21.52■■□□□ 1.04
SMIM4-205ENST00000491607 ITGA7Q13683 1181 aa21.52■■□□□ 1.04
SMIM4-205ENST00000491607 PWP2Q15269 919 aaKnown RBP21.52■■□□□ 1.04
SMIM4-205ENST00000491607 DUSP28Q4G0W2 176 aa21.52■■□□□ 1.04
SMIM4-205ENST00000491607 ENAHQ8N8S7 591 aaPredicted RBP21.52■■□□□ 1.04
SMIM4-205ENST00000491607 TNKSO95271 1327 aa21.52■■□□□ 1.03
SMIM4-205ENST00000491607 LAMA2P24043 3122 aaKnown RBP21.51■■□□□ 1.03
SMIM4-205ENST00000491607 DHX16O60231 1041 aaKnown RBP21.51■■□□□ 1.03
SMIM4-205ENST00000491607 PSMC6P62333 389 aa21.51■■□□□ 1.03
SMIM4-205ENST00000491607 IRX6P78412 446 aaPredicted RBP21.51■■□□□ 1.03
SMIM4-205ENST00000491607 PPIGQ13427 754 aaKnown RBP eCLIP21.51■■□□□ 1.03
SMIM4-205ENST00000491607 CDC37Q16543 378 aaPredicted RBP21.51■■□□□ 1.03
SMIM4-205ENST00000491607 TTC22Q5TAA0 569 aa21.51■■□□□ 1.03
SMIM4-205ENST00000491607 TMEM199Q8N511 208 aa21.51■■□□□ 1.03
SMIM4-205ENST00000491607 UBAC1Q9BSL1 405 aa21.51■■□□□ 1.03
SMIM4-205ENST00000491607 IL25Q9H293 177 aa21.51■■□□□ 1.03
SMIM4-205ENST00000491607 CNNM2Q9H8M5 875 aa21.51■■□□□ 1.03
SMIM4-205ENST00000491607 CD4P01730 458 aa21.5■■□□□ 1.03
SMIM4-205ENST00000491607 GSPT1P15170 499 aaKnown RBP21.5■■□□□ 1.03
SMIM4-205ENST00000491607 CSF2RAP15509 400 aa21.5■■□□□ 1.03
SMIM4-205ENST00000491607 ASPRV1Q53RT3 343 aa21.5■■□□□ 1.03
SMIM4-205ENST00000491607 ADGRF4Q8IZF3 695 aa21.5■■□□□ 1.03
SMIM4-205ENST00000491607 SLC43A3Q8NBI5 491 aa21.5■■□□□ 1.03
SMIM4-205ENST00000491607 ANKS1AQ92625 1134 aa21.5■■□□□ 1.03
SMIM4-205ENST00000491607 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.5■■□□□ 1.03
SMIM4-205ENST00000491607 SEMA6BQ9H3T3 888 aa21.5■■□□□ 1.03
SMIM4-205ENST00000491607 PARP1P09874 1014 aaKnown RBP21.49■■□□□ 1.03
SMIM4-205ENST00000491607 DNERQ8NFT8 737 aa21.49■■□□□ 1.03
SMIM4-205ENST00000491607 OR6J1Q8NGC5 347 aa21.49■■□□□ 1.03
SMIM4-205ENST00000491607 GRIN2DO15399 1336 aa21.49■■□□□ 1.03
SMIM4-205ENST00000491607 B4DLN1 442 aa21.48■■□□□ 1.03
SMIM4-205ENST00000491607 CYP2C18P33260 490 aa21.48■■□□□ 1.03
SMIM4-205ENST00000491607 CPT1AP50416 773 aa21.48■■□□□ 1.03
SMIM4-205ENST00000491607 MRPL12P52815 198 aaKnown RBP21.48■■□□□ 1.03
SMIM4-205ENST00000491607 PPP2R5BQ15173 497 aa21.48■■□□□ 1.03
SMIM4-205ENST00000491607 IFIT1BQ5T764 474 aaKnown RBP21.48■■□□□ 1.03
SMIM4-205ENST00000491607 CDX2Q99626 313 aaPredicted RBP21.48■■□□□ 1.03
SMIM4-205ENST00000491607 TTYH1Q9H313 450 aaPredicted RBP21.48■■□□□ 1.03
SMIM4-205ENST00000491607 HIPK3Q9H422 1215 aa21.48■■□□□ 1.03
SMIM4-205ENST00000491607 VAT1LQ9HCJ6 419 aa21.48■■□□□ 1.03
SMIM4-205ENST00000491607 ABCB11O95342 1321 aa21.48■■□□□ 1.03
SMIM4-205ENST00000491607 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.47■■□□□ 1.03
SMIM4-205ENST00000491607 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.47■■□□□ 1.03
SMIM4-205ENST00000491607 RBM47A0AV96 593 aaKnown RBP21.47■■□□□ 1.03
SMIM4-205ENST00000491607 DLL1O00548 723 aa21.47■■□□□ 1.03
SMIM4-205ENST00000491607 B4GALT4O60513 344 aa21.47■■□□□ 1.03
SMIM4-205ENST00000491607 MYL3P08590 195 aa21.47■■□□□ 1.03
SMIM4-205ENST00000491607 ACRP10323 421 aa21.47■■□□□ 1.03
SMIM4-205ENST00000491607 EDNRBP24530 442 aa21.47■■□□□ 1.03
SMIM4-205ENST00000491607 SEZ6LQ9BYH1 1024 aa21.47■■□□□ 1.03
SMIM4-205ENST00000491607 TRPV6Q9H1D0 765 aa21.47■■□□□ 1.03
SMIM4-205ENST00000491607 GPHNQ9NQX3 736 aaPredicted RBP21.47■■□□□ 1.03
SMIM4-205ENST00000491607 POLR3EQ9NVU0 708 aa21.47■■□□□ 1.03
SMIM4-205ENST00000491607 RAD50Q92878 1312 aa21.47■■□□□ 1.03
SMIM4-205ENST00000491607 QRICH1Q2TAL8 776 aa21.46■■□□□ 1.03
SMIM4-205ENST00000491607 TMEM240Q5SV17 173 aa21.46■■□□□ 1.03
SMIM4-205ENST00000491607 PSRC1Q6PGN9 363 aaPredicted RBP21.46■■□□□ 1.03
SMIM4-205ENST00000491607 C16orf59Q7L2K0 433 aa21.46■■□□□ 1.03
SMIM4-205ENST00000491607 RGS22Q8NE09 1264 aa21.46■■□□□ 1.03
SMIM4-205ENST00000491607 SCFD2Q8WU76 684 aa21.46■■□□□ 1.03
SMIM4-205ENST00000491607 RUFY2Q8WXA3 655 aa21.46■■□□□ 1.03
SMIM4-205ENST00000491607 NKRFO15226 690 aaKnown RBP eCLIP21.45■■□□□ 1.02
SMIM4-205ENST00000491607 PURAQ00577 322 aaKnown RBP21.45■■□□□ 1.02
SMIM4-205ENST00000491607 TRDNQ13061 729 aa21.45■■□□□ 1.02
SMIM4-205ENST00000491607 BRDTQ58F21 947 aaPredicted RBP21.45■■□□□ 1.02
SMIM4-205ENST00000491607 ZNF365Q70YC5 407 aa21.45■■□□□ 1.02
SMIM4-205ENST00000491607 FBXO11Q86XK2 927 aa21.45■■□□□ 1.02
SMIM4-205ENST00000491607 TBC1D5Q92609 795 aa21.45■■□□□ 1.02
SMIM4-205ENST00000491607 JMJD4Q9H9V9 463 aa21.45■■□□□ 1.02
SMIM4-205ENST00000491607 UMODL1Q5DID0 1318 aa21.45■■□□□ 1.02
SMIM4-205ENST00000491607 TXNP10599 105 aaKnown RBP21.44■■□□□ 1.02
SMIM4-205ENST00000491607 DNAJB2P25686 324 aa21.44■■□□□ 1.02
SMIM4-205ENST00000491607 CCL23P55773 120 aa21.44■■□□□ 1.02
SMIM4-205ENST00000491607 CYB5R4Q7L1T6 521 aa21.44■■□□□ 1.02
SMIM4-205ENST00000491607 MCF2L2Q86YR7 1114 aa21.44■■□□□ 1.02
SMIM4-205ENST00000491607 MYLIPQ8WY64 445 aa21.44■■□□□ 1.02
SMIM4-205ENST00000491607 COPS5Q92905 334 aa21.44■■□□□ 1.02
SMIM4-205ENST00000491607 MTG1Q9BT17 334 aaPredicted RBP21.44■■□□□ 1.02
SMIM4-205ENST00000491607 ALDH8A1Q9H2A2 487 aaPredicted RBP21.44■■□□□ 1.02
SMIM4-205ENST00000491607 IL23AQ9NPF7 189 aa21.44■■□□□ 1.02
SMIM4-205ENST00000491607 MRPL11Q9Y3B7 192 aaKnown RBP21.44■■□□□ 1.02
SMIM4-205ENST00000491607 TMEM265A0A087WTH1 108 aa21.43■■□□□ 1.02
SMIM4-205ENST00000491607 CHMLP26374 656 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms