RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 ZNF536O15090 1300 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 UMODL1Q5DID0 1318 aa13.3□□□□□ -0.28
CLCNKA-206ENST00000491433 ANKRD11Q6UB99 2663 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 SOWAHBA6NEL2 793 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 PROB1E7EW31 1015 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 DYNC1LI2O43237 492 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 RAB11FIP3O75154 756 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 HMMRO75330 724 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 CA3P07451 260 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 HNRNPUQ00839 825 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 ASCL5Q7RTU5 278 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 DGLUCYQ7Z3D6 616 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 BMP8AQ7Z5Y6 402 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 FAM160B2Q86V87 743 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 ZNF444Q8N0Y2 327 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 GMCL1P1Q8NEA9 526 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 CHURC1Q8WUH1 139 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 AGBL1Q96MI9 1066 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 TRPV6Q9H1D0 765 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 ALDH8A1Q9H2A2 487 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 CERS4Q9HA82 394 aa13.29□□□□□ -0.28
CLCNKA-206ENST00000491433 TTLL1O95922 423 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 BMP3P12645 472 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 ATP5JP18859 108 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 RASA1P20936 1047 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 KCNA5P22460 613 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 STAT2P52630 851 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 CNTN2Q02246 1040 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 BRDTQ58F21 947 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 SCLYQ96I15 445 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 HAUS7Q99871 368 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 BOLA2Q9H3K6 86 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 VTA1Q9NP79 307 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 GPHNQ9NQX3 736 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 LMCD1Q9NZU5 365 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 ASTN1O14525 1302 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 GVINP1Q7Z2Y8 2422 aa13.28□□□□□ -0.28
CLCNKA-206ENST00000491433 LOC102724159A0A0B4J2E5 919 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 PRR23AA6NEV1 266 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 GRXCR2A6NFK2 248 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 BAIAP3O94812 1187 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 SMPD1P17405 629 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 CPT1AP50416 773 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 TTLL4Q14679 1199 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 PWP2Q15269 919 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 RETREG2Q8NC44 543 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 ARNTL2Q8WYA1 636 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 PBXIP1Q96AQ6 731 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 A1CFQ9NQ94 594 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 HOMER2Q9NSB8 354 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 RNF146Q9NTX7 359 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 GRIN2DO15399 1336 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 TNKSO95271 1327 aa13.27□□□□□ -0.29
CLCNKA-206ENST00000491433 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 EPOPA6NHQ4 379 aa13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 PITPNM1O00562 1244 aa13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 IKQ13123 557 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 SLFN13Q68D06 897 aa13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 KIAA1211Q6ZU35 1233 aa13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 DEFB128Q7Z7B8 93 aa13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 RAD50Q92878 1312 aa13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 TRERF1Q96PN7 1200 aa13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 MTMR4Q9NYA4 1195 aa13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 ADD3Q9UEY8 706 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 PRKAG3Q9UGI9 489 aa13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 FAM50BQ9Y247 325 aa13.26□□□□□ -0.29
CLCNKA-206ENST00000491433 IGKV6D-41A0A0C4DH26 115 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 MINDY4BA8MYZ0 360 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 TMEM232C9JQI7 657 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 KPNA6O60684 536 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 PLA2G6O60733 806 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 MS4A1P11836 297 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 GNAT2P19087 354 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 KCNJ6P48051 423 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 PSMC6P62333 389 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 TAP1Q03518 808 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 PTPN11Q06124 597 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 GRB10Q13322 594 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 BFSP2Q13515 415 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 LRRFIP1Q32MZ4 808 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 DUSP28Q4G0W2 176 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 TAPT1Q6NXT6 567 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 HERC6Q8IVU3 1022 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 CCDC155Q8N6L0 562 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 STAG1Q8WVM7 1258 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 CEP95Q96GE4 821 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 MPHOSPH6Q99547 160 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 MTG1Q9BT17 334 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 FTOQ9C0B1 505 aaKnown RBP eCLIP13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 PUS7LQ9H0K6 701 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 ISY1Q9ULR0 285 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 SCN5AQ14524 2016 aa13.25□□□□□ -0.29
CLCNKA-206ENST00000491433 NKRFO15226 690 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 SLC3A2P08195 630 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 TSPY3P0CV98 308 aa13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 TSPY8P0CW00 308 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms