RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 PALD1Q9ULE6 856 aa7.19□□□□□ -1.26
PHC3-213ENST00000491258 GLI4P10075 376 aa7.18□□□□□ -1.26
PHC3-213ENST00000491258 PMLP29590 882 aa7.18□□□□□ -1.26
PHC3-213ENST00000491258 ZNF827Q17R98 1081 aa7.18□□□□□ -1.26
PHC3-213ENST00000491258 B3GNT8Q7Z7M8 397 aa7.18□□□□□ -1.26
PHC3-213ENST00000491258 CARFQ8N187 725 aa7.18□□□□□ -1.26
PHC3-213ENST00000491258 ADCY4Q8NFM4 1077 aa7.18□□□□□ -1.26
PHC3-213ENST00000491258 NLGN2Q8NFZ4 835 aa7.18□□□□□ -1.26
PHC3-213ENST00000491258 RNF34Q969K3 372 aa7.18□□□□□ -1.26
PHC3-213ENST00000491258 PPT2Q9UMR5 302 aa7.18□□□□□ -1.26
PHC3-213ENST00000491258 RWDD3Q9Y3V2 267 aa7.18□□□□□ -1.26
PHC3-213ENST00000491258 CNR2P34972 360 aa7.17□□□□□ -1.26
PHC3-213ENST00000491258 ZNF76P36508 570 aa7.16□□□□□ -1.26
PHC3-213ENST00000491258 GJA9P57773 515 aa7.16□□□□□ -1.26
PHC3-213ENST00000491258 DLX2Q07687 328 aaPredicted RBP7.16□□□□□ -1.26
PHC3-213ENST00000491258 RCSD1Q6JBY9 416 aa7.16□□□□□ -1.26
PHC3-213ENST00000491258 LZTR1Q8N653 840 aa7.16□□□□□ -1.26
PHC3-213ENST00000491258 SMARCC2Q8TAQ2 1214 aa7.16□□□□□ -1.26
PHC3-213ENST00000491258 TSPAN17Q96FV3 270 aa7.16□□□□□ -1.26
PHC3-213ENST00000491258 CNOT11Q9UKZ1 510 aaKnown RBP7.16□□□□□ -1.26
PHC3-213ENST00000491258 ZNF214Q9UL59 606 aaPredicted RBP7.16□□□□□ -1.26
PHC3-213ENST00000491258 DIS3Q9Y2L1 958 aaKnown RBP7.16□□□□□ -1.26
PHC3-213ENST00000491258 DUSP10Q9Y6W6 482 aa7.16□□□□□ -1.26
PHC3-213ENST00000491258 A0A087WZG4 1122 aa7.15□□□□□ -1.26
PHC3-213ENST00000491258 STXBP3O00186 592 aa7.15□□□□□ -1.26
PHC3-213ENST00000491258 CBFA2T2O43439 604 aa7.15□□□□□ -1.26
PHC3-213ENST00000491258 DPY19L1Q2PZI1 675 aa7.15□□□□□ -1.26
PHC3-213ENST00000491258 ZNF394Q53GI3 561 aa7.15□□□□□ -1.26
PHC3-213ENST00000491258 EEF1DP3Q658K8 133 aa7.15□□□□□ -1.26
PHC3-213ENST00000491258 NOX5Q96PH1 765 aa7.15□□□□□ -1.26
PHC3-213ENST00000491258 MCMBPQ9BTE3 642 aa7.15□□□□□ -1.26
PHC3-213ENST00000491258 NUDT5Q9UKK9 219 aa7.15□□□□□ -1.26
PHC3-213ENST00000491258 PCDHGB7Q9Y5F8 929 aa7.15□□□□□ -1.26
PHC3-213ENST00000491258 AURKAO14965 403 aa7.14□□□□□ -1.27
PHC3-213ENST00000491258 NOBOXO60393 691 aa7.14□□□□□ -1.27
PHC3-213ENST00000491258 VAMP4O75379 141 aa7.14□□□□□ -1.27
PHC3-213ENST00000491258 SARSP49591 514 aaKnown RBP7.14□□□□□ -1.27
PHC3-213ENST00000491258 RBBP8NLQ8NC74 664 aaPredicted RBP7.14□□□□□ -1.27
PHC3-213ENST00000491258 PEX11GQ96HA9 241 aa7.14□□□□□ -1.27
PHC3-213ENST00000491258 HAUS7Q99871 368 aa7.14□□□□□ -1.27
PHC3-213ENST00000491258 NTMQ9P121 344 aa7.14□□□□□ -1.27
PHC3-213ENST00000491258 WHRNQ9P202 907 aa7.14□□□□□ -1.27
PHC3-213ENST00000491258 FBLN5Q9UBX5 448 aa7.14□□□□□ -1.27
PHC3-213ENST00000491258 MYRFQ9Y2G1 1151 aa7.14□□□□□ -1.27
PHC3-213ENST00000491258 LTBP3Q9NS15 1303 aa7.13□□□□□ -1.27
PHC3-213ENST00000491258 SEPHS1P49903 392 aa7.13□□□□□ -1.27
PHC3-213ENST00000491258 TRIM26Q12899 539 aaPredicted RBP7.13□□□□□ -1.27
PHC3-213ENST00000491258 GNPTABQ3T906 1256 aa7.13□□□□□ -1.27
PHC3-213ENST00000491258 LDLRAD1Q5T700 205 aa7.13□□□□□ -1.27
PHC3-213ENST00000491258 CCDC81Q6ZN84 652 aa7.13□□□□□ -1.27
PHC3-213ENST00000491258 CPNE8Q86YQ8 564 aa7.13□□□□□ -1.27
PHC3-213ENST00000491258 USP33Q8TEY7 942 aa7.13□□□□□ -1.27
PHC3-213ENST00000491258 ZBTB8AQ96BR9 441 aa7.13□□□□□ -1.27
PHC3-213ENST00000491258 LNPKQ9C0E8 428 aa7.13□□□□□ -1.27
PHC3-213ENST00000491258 GBP3Q9H0R5 595 aa7.13□□□□□ -1.27
PHC3-213ENST00000491258 GULP1Q9UBP9 304 aa7.13□□□□□ -1.27
PHC3-213ENST00000491258 MAGEA10P43363 369 aaPredicted RBP7.12□□□□□ -1.27
PHC3-213ENST00000491258 SLC9A5Q14940 896 aa7.12□□□□□ -1.27
PHC3-213ENST00000491258 HEATR6Q6AI08 1181 aaKnown RBP7.12□□□□□ -1.27
PHC3-213ENST00000491258 TTLL7Q6ZT98 887 aa7.12□□□□□ -1.27
PHC3-213ENST00000491258 ADAT2Q7Z6V5 191 aaKnown RBP7.12□□□□□ -1.27
PHC3-213ENST00000491258 NETO2Q8NC67 525 aa7.12□□□□□ -1.27
PHC3-213ENST00000491258 BACE2Q9Y5Z0 518 aa7.12□□□□□ -1.27
PHC3-213ENST00000491258 CACNB2Q08289 660 aaPredicted RBP7.11□□□□□ -1.27
PHC3-213ENST00000491258 SMAD4Q13485 552 aaKnown RBP7.11□□□□□ -1.27
PHC3-213ENST00000491258 CPA5Q8WXQ8 436 aa7.11□□□□□ -1.27
PHC3-213ENST00000491258 DDX11Q96FC9 970 aa7.11□□□□□ -1.27
PHC3-213ENST00000491258 FGD4Q96M96 766 aa7.11□□□□□ -1.27
PHC3-213ENST00000491258 CRBNQ96SW2 442 aa7.11□□□□□ -1.27
PHC3-213ENST00000491258 KLHL25Q9H0H3 589 aa7.11□□□□□ -1.27
PHC3-213ENST00000491258 SPATA6Q9NWH7 488 aaPredicted RBP7.11□□□□□ -1.27
PHC3-213ENST00000491258 SMPD4Q9NXE4 827 aa7.11□□□□□ -1.27
PHC3-213ENST00000491258 C2orf71A6NGG8 1288 aa7.1□□□□□ -1.27
PHC3-213ENST00000491258 SMARCA5O60264 1052 aaPredicted RBP7.1□□□□□ -1.27
PHC3-213ENST00000491258 PPP1R11O60927 126 aaPredicted RBP7.1□□□□□ -1.27
PHC3-213ENST00000491258 ZBTB7AO95365 584 aa7.1□□□□□ -1.27
PHC3-213ENST00000491258 ITGB3P05106 788 aa7.1□□□□□ -1.27
PHC3-213ENST00000491258 ADAM17P78536 824 aa7.1□□□□□ -1.27
PHC3-213ENST00000491258 AMPD2Q01433 879 aa7.1□□□□□ -1.27
PHC3-213ENST00000491258 WWC2Q6AWC2 1192 aa7.1□□□□□ -1.27
PHC3-213ENST00000491258 ZNF761Q86XN6 746 aaPredicted RBP7.1□□□□□ -1.27
PHC3-213ENST00000491258 MTA3Q9BTC8 594 aa7.1□□□□□ -1.27
PHC3-213ENST00000491258 PCDHB10Q9UN67 800 aa7.1□□□□□ -1.27
PHC3-213ENST00000491258 NPHP3-ACAD11A0A0J9YXS1 232 aa7.09□□□□□ -1.27
PHC3-213ENST00000491258 PPM1BO75688 479 aa7.09□□□□□ -1.27
PHC3-213ENST00000491258 EPHX1P07099 455 aa7.09□□□□□ -1.27
PHC3-213ENST00000491258 PAMP19021 973 aa7.09□□□□□ -1.27
PHC3-213ENST00000491258 FANCCQ00597 558 aa7.09□□□□□ -1.27
PHC3-213ENST00000491258 CGGBP1Q9UFW8 167 aaPredicted RBP7.09□□□□□ -1.27
PHC3-213ENST00000491258 SIT1Q9Y3P8 196 aa7.09□□□□□ -1.27
PHC3-213ENST00000491258 SLC12A7Q9Y666 1083 aa7.09□□□□□ -1.27
PHC3-213ENST00000491258 NPHS1O60500 1241 aa7.08□□□□□ -1.28
PHC3-213ENST00000491258 FUCA1P04066 466 aa7.08□□□□□ -1.28
PHC3-213ENST00000491258 CYP2C8P10632 490 aa7.08□□□□□ -1.28
PHC3-213ENST00000491258 SLC7A5Q01650 507 aa7.08□□□□□ -1.28
PHC3-213ENST00000491258 ADAMTS17Q8TE56 1095 aa7.08□□□□□ -1.28
PHC3-213ENST00000491258 BACH2Q9BYV9 841 aa7.08□□□□□ -1.28
PHC3-213ENST00000491258 PHAXQ9H814 394 aaKnown RBP7.08□□□□□ -1.28
PHC3-213ENST00000491258 GINM1Q9NU53 330 aa7.08□□□□□ -1.28
PHC3-213ENST00000491258 SUGT1Q9Y2Z0 365 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms