RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 LOC102724159A0A0B4J2E5 919 aa21.04■□□□□ 0.96
HMGN1-219ENST00000491183 DYNC1LI2O43237 492 aaPredicted RBP21.04■□□□□ 0.96
HMGN1-219ENST00000491183 PARP1P09874 1014 aaKnown RBP21.04■□□□□ 0.96
HMGN1-219ENST00000491183 PWP2Q15269 919 aaKnown RBP21.04■□□□□ 0.96
HMGN1-219ENST00000491183 KIAA1211Q6ZU35 1233 aa21.04■□□□□ 0.96
HMGN1-219ENST00000491183 TLK2Q86UE8 772 aa21.04■□□□□ 0.96
HMGN1-219ENST00000491183 RGS22Q8NE09 1264 aa21.04■□□□□ 0.96
HMGN1-219ENST00000491183 JMJD4Q9H9V9 463 aa21.04■□□□□ 0.96
HMGN1-219ENST00000491183 VAT1LQ9HCJ6 419 aa21.04■□□□□ 0.96
HMGN1-219ENST00000491183 TRDNQ13061 729 aa21.03■□□□□ 0.96
HMGN1-219ENST00000491183 SHHQ15465 462 aa21.03■□□□□ 0.96
HMGN1-219ENST00000491183 GPR153Q6NV75 609 aa21.03■□□□□ 0.96
HMGN1-219ENST00000491183 STOX1Q6ZVD7 989 aa21.03■□□□□ 0.96
HMGN1-219ENST00000491183 MAP4K1Q92918 833 aa21.03■□□□□ 0.96
HMGN1-219ENST00000491183 VTI1AQ96AJ9 217 aa21.03■□□□□ 0.96
HMGN1-219ENST00000491183 TMEM39AQ9NV64 488 aa21.03■□□□□ 0.96
HMGN1-219ENST00000491183 Q9Y3F1 56 aa21.03■□□□□ 0.96
HMGN1-219ENST00000491183 MYH6P13533 1939 aa21.02■□□□□ 0.96
HMGN1-219ENST00000491183 RBM47A0AV96 593 aaKnown RBP21.02■□□□□ 0.96
HMGN1-219ENST00000491183 DCDC2CA8MYV0 355 aa21.02■□□□□ 0.96
HMGN1-219ENST00000491183 E7EWF7 191 aa21.02■□□□□ 0.96
HMGN1-219ENST00000491183 ARVCFO00192 962 aa21.02■□□□□ 0.96
HMGN1-219ENST00000491183 EDNRBP24530 442 aa21.02■□□□□ 0.96
HMGN1-219ENST00000491183 FSCN1Q16658 493 aaKnown RBP21.02■□□□□ 0.96
HMGN1-219ENST00000491183 QRICH1Q2TAL8 776 aa21.02■□□□□ 0.96
HMGN1-219ENST00000491183 C9orf50Q5SZB4 431 aa21.02■□□□□ 0.96
HMGN1-219ENST00000491183 CXCL17Q6UXB2 119 aa21.02■□□□□ 0.96
HMGN1-219ENST00000491183 AP5M1Q9H0R1 490 aa21.02■□□□□ 0.96
HMGN1-219ENST00000491183 SENP2Q9HC62 589 aa21.02■□□□□ 0.96
HMGN1-219ENST00000491183 ABCB11O95342 1321 aa21.02■□□□□ 0.95
HMGN1-219ENST00000491183 RAG1P15918 1043 aa21.01■□□□□ 0.95
HMGN1-219ENST00000491183 DUSP28Q4G0W2 176 aa21.01■□□□□ 0.95
HMGN1-219ENST00000491183 SKAP1Q86WV1 359 aa21.01■□□□□ 0.95
HMGN1-219ENST00000491183 DNERQ8NFT8 737 aa21.01■□□□□ 0.95
HMGN1-219ENST00000491183 MAD2L2Q9UI95 211 aa21.01■□□□□ 0.95
HMGN1-219ENST00000491183 A0A0U1RQG5 324 aaPredicted RBP21■□□□□ 0.95
HMGN1-219ENST00000491183 PALM3A6NDB9 673 aaPredicted RBP21■□□□□ 0.95
HMGN1-219ENST00000491183 KLRF2D3W0D1 207 aa21■□□□□ 0.95
HMGN1-219ENST00000491183 DHX16O60231 1041 aaKnown RBP21■□□□□ 0.95
HMGN1-219ENST00000491183 EPHB4P54760 987 aa21■□□□□ 0.95
HMGN1-219ENST00000491183 CHST3Q7LGC8 479 aa21■□□□□ 0.95
HMGN1-219ENST00000491183 FBXO11Q86XK2 927 aa21■□□□□ 0.95
HMGN1-219ENST00000491183 NCOA7Q8NI08 942 aa21■□□□□ 0.95
HMGN1-219ENST00000491183 WDR11Q9BZH6 1224 aa21■□□□□ 0.95
HMGN1-219ENST00000491183 COL20A1Q9P218 1284 aa21■□□□□ 0.95
HMGN1-219ENST00000491183 TBX21Q9UL17 535 aa21■□□□□ 0.95
HMGN1-219ENST00000491183 RBM8AQ9Y5S9 174 aaKnown RBP21■□□□□ 0.95
HMGN1-219ENST00000491183 GRIN2DO15399 1336 aa21■□□□□ 0.95
HMGN1-219ENST00000491183 IFIT3O14879 490 aaKnown RBP20.99■□□□□ 0.95
HMGN1-219ENST00000491183 PDE4DQ08499 809 aa20.99■□□□□ 0.95
HMGN1-219ENST00000491183 SLC35G1Q2M3R5 365 aa20.99■□□□□ 0.95
HMGN1-219ENST00000491183 Q7L0L9 218 aa20.99■□□□□ 0.95
HMGN1-219ENST00000491183 FAM126BQ8IXS8 530 aa20.99■□□□□ 0.95
HMGN1-219ENST00000491183 SLC43A3Q8NBI5 491 aa20.99■□□□□ 0.95
HMGN1-219ENST00000491183 SYTL5Q8TDW5 730 aaPredicted RBP20.99■□□□□ 0.95
HMGN1-219ENST00000491183 MTMR8Q96EF0 704 aa20.99■□□□□ 0.95
HMGN1-219ENST00000491183 TAAR1Q96RJ0 339 aa20.99■□□□□ 0.95
HMGN1-219ENST00000491183 MAF1Q9H063 256 aa20.99■□□□□ 0.95
HMGN1-219ENST00000491183 MROH7Q68CQ1 1323 aa20.99■□□□□ 0.95
HMGN1-219ENST00000491183 PPP1R11O60927 126 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-219ENST00000491183 ANTXR2P58335 489 aa20.98■□□□□ 0.95
HMGN1-219ENST00000491183 RALYLQ86SE5 291 aaKnown RBP20.98■□□□□ 0.95
HMGN1-219ENST00000491183 DEFB123Q8N688 67 aa20.98■□□□□ 0.95
HMGN1-219ENST00000491183 IGDCC4Q8TDY8 1250 aa20.98■□□□□ 0.95
HMGN1-219ENST00000491183 OPLAHO14841 1288 aa20.97■□□□□ 0.95
HMGN1-219ENST00000491183 ZEB2O60315 1214 aa20.97■□□□□ 0.95
HMGN1-219ENST00000491183 CABYRO75952 493 aa20.97■□□□□ 0.95
HMGN1-219ENST00000491183 TIMP1P01033 207 aa20.97■□□□□ 0.95
HMGN1-219ENST00000491183 CD4P01730 458 aa20.97■□□□□ 0.95
HMGN1-219ENST00000491183 GRM4Q14833 912 aa20.97■□□□□ 0.95
HMGN1-219ENST00000491183 MB21D2Q8IYB1 491 aaPredicted RBP20.97■□□□□ 0.95
HMGN1-219ENST00000491183 ESYT1Q9BSJ8 1104 aa20.97■□□□□ 0.95
HMGN1-219ENST00000491183 LSG1Q9H089 658 aaKnown RBP20.97■□□□□ 0.95
HMGN1-219ENST00000491183 MRPL11Q9Y3B7 192 aaKnown RBP20.97■□□□□ 0.95
HMGN1-219ENST00000491183 ERICH2A1L162 156 aa20.96■□□□□ 0.95
HMGN1-219ENST00000491183 PSMC6P62333 389 aa20.96■□□□□ 0.95
HMGN1-219ENST00000491183 TROAPQ12815 778 aa20.96■□□□□ 0.95
HMGN1-219ENST00000491183 ITGA7Q13683 1181 aa20.96■□□□□ 0.95
HMGN1-219ENST00000491183 WTAPQ15007 396 aa20.96■□□□□ 0.95
HMGN1-219ENST00000491183 MCF2L2Q86YR7 1114 aa20.96■□□□□ 0.95
HMGN1-219ENST00000491183 MPHOSPH6Q99547 160 aaKnown RBP20.96■□□□□ 0.95
HMGN1-219ENST00000491183 AMNQ9BXJ7 453 aa20.96■□□□□ 0.95
HMGN1-219ENST00000491183 RIOX1Q9H6W3 641 aa20.96■□□□□ 0.95
HMGN1-219ENST00000491183 ZBTB5O15062 677 aa20.95■□□□□ 0.94
HMGN1-219ENST00000491183 FPGSQ05932 587 aa20.95■□□□□ 0.94
HMGN1-219ENST00000491183 COL9A3Q14050 684 aaPredicted RBP20.95■□□□□ 0.94
HMGN1-219ENST00000491183 TMEM67Q5HYA8 995 aa20.95■□□□□ 0.94
HMGN1-219ENST00000491183 CENPQQ7L2Z9 268 aaPredicted RBP20.95■□□□□ 0.94
HMGN1-219ENST00000491183 COPS5Q92905 334 aa20.95■□□□□ 0.94
HMGN1-219ENST00000491183 MTMR10Q9NXD2 777 aa20.95■□□□□ 0.94
HMGN1-219ENST00000491183 BAZ2BQ9UIF8 2168 aaKnown RBP20.95■□□□□ 0.94
HMGN1-219ENST00000491183 B4DLN1 442 aa20.94■□□□□ 0.94
HMGN1-219ENST00000491183 TLR3O15455 904 aaKnown RBP20.94■□□□□ 0.94
HMGN1-219ENST00000491183 CYTH3O43739 400 aa20.94■□□□□ 0.94
HMGN1-219ENST00000491183 ARIH2O95376 493 aa20.94■□□□□ 0.94
HMGN1-219ENST00000491183 MRPL12P52815 198 aaKnown RBP20.94■□□□□ 0.94
HMGN1-219ENST00000491183 MFSD5Q6N075 450 aa20.94■□□□□ 0.94
HMGN1-219ENST00000491183 OR6J1Q8NGC5 347 aa20.94■□□□□ 0.94
HMGN1-219ENST00000491183 NSUN6Q8TEA1 469 aaKnown RBP20.94■□□□□ 0.94
HMGN1-219ENST00000491183 SCFD2Q8WU76 684 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms