RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CATSPERGQ6ZRH7 1159 aa25.87■■□□□ 1.73
USF3-203ENST00000491165 ERCC4Q92889 916 aaPredicted RBP25.87■■□□□ 1.73
USF3-203ENST00000491165 FAM155AB1AL88 458 aaPredicted RBP25.86■■□□□ 1.73
USF3-203ENST00000491165 SPTLC2O15270 562 aa25.86■■□□□ 1.73
USF3-203ENST00000491165 ZRSR1Q15695 479 aaKnown RBP25.86■■□□□ 1.73
USF3-203ENST00000491165 PDCL2Q8N4E4 241 aa25.86■■□□□ 1.73
USF3-203ENST00000491165 VPS54Q9P1Q0 977 aa25.86■■□□□ 1.73
USF3-203ENST00000491165 SCG2P13521 617 aa25.85■■□□□ 1.73
USF3-203ENST00000491165 CDC37Q16543 378 aaPredicted RBP25.85■■□□□ 1.73
USF3-203ENST00000491165 QRICH1Q2TAL8 776 aa25.85■■□□□ 1.73
USF3-203ENST00000491165 WWC2Q6AWC2 1192 aa25.85■■□□□ 1.73
USF3-203ENST00000491165 BRI3BPQ8WY22 251 aa25.85■■□□□ 1.73
USF3-203ENST00000491165 RRP36Q96EU6 259 aaKnown RBP25.85■■□□□ 1.73
USF3-203ENST00000491165 SLF1Q9BQI6 1058 aa25.85■■□□□ 1.73
USF3-203ENST00000491165 KIAA1468Q9P260 1216 aa25.85■■□□□ 1.73
USF3-203ENST00000491165 AKAP17AQ02040 695 aaKnown RBP25.85■■□□□ 1.73
USF3-203ENST00000491165 CHURC1Q8WUH1 139 aa25.85■■□□□ 1.73
USF3-203ENST00000491165 PPP1R9AQ9ULJ8 1098 aa25.85■■□□□ 1.73
USF3-203ENST00000491165 ZBTB5O15062 677 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 ARID5BQ14865 1188 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 SMAP1Q8IYB5 467 aaPredicted RBP25.84■■□□□ 1.73
USF3-203ENST00000491165 PRPF38AQ8NAV1 312 aaKnown RBP25.84■■□□□ 1.73
USF3-203ENST00000491165 RGS22Q8NE09 1264 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 ATG4CQ96DT6 458 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 PTPN18Q99952 460 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 AGTPBP1Q9UPW5 1226 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 ADAMTS3O15072 1205 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 PEX10O60683 326 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 SLC10A3P09131 477 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 SKILP12757 684 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 SYCP1Q15431 976 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 FILIP1Q7Z7B0 1213 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 FAM160B2Q86V87 743 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 ZIC5Q96T25 663 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 BPIFA3Q9BQP9 254 aa25.84■■□□□ 1.73
USF3-203ENST00000491165 CCL15-CCL14A0A0B4J2E2 113 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 USP17L15C9J2P7 530 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 USP17L13C9JLJ4 530 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 USP17L11C9JVI0 530 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 USP17L18D6R9N7 530 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 USP17L22D6RA61 530 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 USP17L17D6RBQ6 530 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 USP17L19D6RCP7 530 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 USP17L20D6RJB6 530 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 APLP1P51693 650 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 GTF2A2P52657 109 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 USP17L24Q0WX57 530 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 CCL15Q16663 113 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 COA7Q96BR5 231 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 RANBP17Q9H2T7 1088 aaKnown RBP25.83■■□□□ 1.73
USF3-203ENST00000491165 KCNJ14Q9UNX9 436 aa25.83■■□□□ 1.73
USF3-203ENST00000491165 HOXA7P31268 230 aaPredicted RBP25.82■■□□□ 1.72
USF3-203ENST00000491165 HTRA3P83110 453 aa25.82■■□□□ 1.72
USF3-203ENST00000491165 KIF23Q02241 960 aaPredicted RBP25.82■■□□□ 1.72
USF3-203ENST00000491165 HEATR3Q7Z4Q2 680 aa25.82■■□□□ 1.72
USF3-203ENST00000491165 SEC63Q9UGP8 760 aaKnown RBP25.82■■□□□ 1.72
USF3-203ENST00000491165 ZNF536O15090 1300 aa25.82■■□□□ 1.72
USF3-203ENST00000491165 PNMA6FA0A0J9YX94 578 aa25.82■■□□□ 1.72
USF3-203ENST00000491165 SPDYE16A6NNV3 312 aaPredicted RBP25.82■■□□□ 1.72
USF3-203ENST00000491165 ANO1Q5XXA6 986 aa25.82■■□□□ 1.72
USF3-203ENST00000491165 CEP135Q66GS9 1140 aa25.82■■□□□ 1.72
USF3-203ENST00000491165 CYP4F22Q6NT55 531 aa25.82■■□□□ 1.72
USF3-203ENST00000491165 FASTKD5Q7L8L6 764 aaKnown RBP25.82■■□□□ 1.72
USF3-203ENST00000491165 CCDC112Q8NEF3 446 aa25.82■■□□□ 1.72
USF3-203ENST00000491165 A0A0G2JMZ2 1700 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 KIF28PB7ZC32 967 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 BTBD19C9JJ37 291 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 STXBP3O00186 592 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 GSDMDP57764 484 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 COG2Q14746 738 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 CCDC174Q6PII3 467 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 CETPP11597 493 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 DSG3P32926 999 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 CCZ1BP86790 482 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 CCZ1P86791 482 aaPredicted RBP25.81■■□□□ 1.72
USF3-203ENST00000491165 GRM1Q13255 1194 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 DPCR1Q3MIW9 517 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 KRT40Q6A162 431 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 ASCC2Q9H1I8 757 aaPredicted RBP25.81■■□□□ 1.72
USF3-203ENST00000491165 BARHL2Q9NY43 387 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 ADAMTS5Q9UNA0 930 aa25.81■■□□□ 1.72
USF3-203ENST00000491165 VWA5AO00534 786 aa25.8■■□□□ 1.72
USF3-203ENST00000491165 NPY5RQ15761 445 aa25.8■■□□□ 1.72
USF3-203ENST00000491165 P2RX7Q99572 595 aaKnown RBP25.8■■□□□ 1.72
USF3-203ENST00000491165 SLC38A10Q9HBR0 1119 aa25.8■■□□□ 1.72
USF3-203ENST00000491165 CREBZFQ9NS37 354 aa25.8■■□□□ 1.72
USF3-203ENST00000491165 ZNF202O95125 648 aa25.79■■□□□ 1.72
USF3-203ENST00000491165 NCBP1Q09161 790 aaKnown RBP25.79■■□□□ 1.72
USF3-203ENST00000491165 USH1GQ495M9 461 aa25.79■■□□□ 1.72
USF3-203ENST00000491165 REPS2Q8NFH8 660 aa25.79■■□□□ 1.72
USF3-203ENST00000491165 HHIPL1Q96JK4 782 aa25.79■■□□□ 1.72
USF3-203ENST00000491165 IMPACTQ9P2X3 320 aa25.79■■□□□ 1.72
USF3-203ENST00000491165 CMA1P23946 247 aa25.79■■□□□ 1.72
USF3-203ENST00000491165 WASF1Q92558 559 aa25.79■■□□□ 1.72
USF3-203ENST00000491165 CYP2C8P10632 490 aa25.78■■□□□ 1.72
USF3-203ENST00000491165 AXDND1Q5T1B0 1012 aaPredicted RBP25.78■■□□□ 1.72
USF3-203ENST00000491165 AGBL1Q96MI9 1066 aa25.78■■□□□ 1.72
USF3-203ENST00000491165 USP27XA6NNY8 438 aa25.78■■□□□ 1.72
USF3-203ENST00000491165 NLRP12P59046 1061 aa25.78■■□□□ 1.72
USF3-203ENST00000491165 PTPN14Q15678 1187 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms