RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 SLC35G1Q2M3R5 365 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 NSMFQ6X4W1 530 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 BLIDQ8IZY5 108 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 ANKRD35Q8N283 1001 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 REPS2Q8NFH8 660 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 AIFM3Q96NN9 605 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 MOV10L1Q9BXT6 1211 aaKnown RBP12.55□□□□□ -0.4
VARS2-210ENST00000490699 ZMYND12Q9H0C1 365 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 RIC8AQ9NPQ8 531 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 SLC5A4Q9NY91 659 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 BTBD7Q9P203 1132 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 RBPJLQ9UBG7 517 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 CPA4Q9UI42 421 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 ATP6V1DQ9Y5K8 247 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 ZNF536O15090 1300 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 PPP1R11O60927 126 aaPredicted RBP12.54□□□□□ -0.4
VARS2-210ENST00000490699 TRPA1O75762 1119 aa12.54□□□□□ -0.4
VARS2-210ENST00000490699 FOSP01100 380 aaPredicted RBP12.54□□□□□ -0.4
VARS2-210ENST00000490699 ERCC3P19447 782 aa12.54□□□□□ -0.4
VARS2-210ENST00000490699 AP3B2Q13367 1082 aa12.54□□□□□ -0.4
VARS2-210ENST00000490699 RNF207Q6ZRF8 634 aa12.54□□□□□ -0.4
VARS2-210ENST00000490699 KRT25Q7Z3Z0 450 aa12.54□□□□□ -0.4
VARS2-210ENST00000490699 DIS3L2Q8IYB7 885 aaKnown RBP12.54□□□□□ -0.4
VARS2-210ENST00000490699 DAGLBQ8NCG7 672 aa12.54□□□□□ -0.4
VARS2-210ENST00000490699 ZIC5Q96T25 663 aa12.54□□□□□ -0.4
VARS2-210ENST00000490699 MMP19Q99542 508 aa12.54□□□□□ -0.4
VARS2-210ENST00000490699 PHF20Q9BVI0 1012 aa12.54□□□□□ -0.4
VARS2-210ENST00000490699 ZSCAN16Q9H4T2 348 aaPredicted RBP12.54□□□□□ -0.4
VARS2-210ENST00000490699 NOL7Q9UMY1 257 aaKnown RBP12.54□□□□□ -0.4
VARS2-210ENST00000490699 KCNJ14Q9UNX9 436 aa12.54□□□□□ -0.4
VARS2-210ENST00000490699 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
VARS2-210ENST00000490699 STRNO43815 780 aa12.53□□□□□ -0.4
VARS2-210ENST00000490699 BRAPQ7Z569 592 aa12.53□□□□□ -0.4
VARS2-210ENST00000490699 CFHR5Q9BXR6 569 aa12.53□□□□□ -0.4
VARS2-210ENST00000490699 FOXP1Q9H334 677 aaPredicted RBP12.53□□□□□ -0.4
VARS2-210ENST00000490699 TXNRD2Q9NNW7 524 aa12.53□□□□□ -0.4
VARS2-210ENST00000490699 RNF186Q9NXI6 227 aa12.53□□□□□ -0.4
VARS2-210ENST00000490699 CHMP5Q9NZZ3 219 aa12.53□□□□□ -0.4
VARS2-210ENST00000490699 ADD3Q9UEY8 706 aaKnown RBP12.53□□□□□ -0.4
VARS2-210ENST00000490699 PIK3CDO00329 1044 aa12.52□□□□□ -0.41
VARS2-210ENST00000490699 TNPO2O14787 897 aaKnown RBP12.52□□□□□ -0.41
VARS2-210ENST00000490699 DTNBO60941 627 aa12.52□□□□□ -0.41
VARS2-210ENST00000490699 CNMDO75829 334 aa12.52□□□□□ -0.41
VARS2-210ENST00000490699 ZSCAN22P10073 491 aaPredicted RBP12.52□□□□□ -0.41
VARS2-210ENST00000490699 BCRP11274 1271 aa12.52□□□□□ -0.41
VARS2-210ENST00000490699 FCGRTP55899 365 aa12.52□□□□□ -0.41
VARS2-210ENST00000490699 C17orf99Q6UX52 265 aa12.52□□□□□ -0.41
VARS2-210ENST00000490699 PLEKHH3Q7Z736 793 aa12.52□□□□□ -0.41
VARS2-210ENST00000490699 ABRAQ8N0Z2 381 aa12.52□□□□□ -0.41
VARS2-210ENST00000490699 SOCS4Q8WXH5 440 aa12.52□□□□□ -0.41
VARS2-210ENST00000490699 NAP1L4Q99733 375 aaKnown RBP12.52□□□□□ -0.41
VARS2-210ENST00000490699 ADGRA2Q96PE1 1338 aa12.52□□□□□ -0.41
VARS2-210ENST00000490699 NFIBO00712 420 aa12.51□□□□□ -0.41
VARS2-210ENST00000490699 TBC1D8O95759 1140 aa12.51□□□□□ -0.41
VARS2-210ENST00000490699 HOXD10P28358 340 aa12.51□□□□□ -0.41
VARS2-210ENST00000490699 SP3Q02447 781 aa12.51□□□□□ -0.41
VARS2-210ENST00000490699 NONOQ15233 471 aaKnown RBP eCLIP12.51□□□□□ -0.41
VARS2-210ENST00000490699 MUM1L1Q5H9M0 696 aa12.51□□□□□ -0.41
VARS2-210ENST00000490699 FCHSD1Q86WN1 690 aa12.51□□□□□ -0.41
VARS2-210ENST00000490699 NOSTRINQ8IVI9 506 aa12.51□□□□□ -0.41
VARS2-210ENST00000490699 ERO1AQ96HE7 468 aa12.51□□□□□ -0.41
VARS2-210ENST00000490699 BIN2Q9UBW5 565 aaPredicted RBP12.51□□□□□ -0.41
VARS2-210ENST00000490699 RIPK3Q9Y572 518 aa12.51□□□□□ -0.41
VARS2-210ENST00000490699 SLC15A5A6NIM6 579 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 HOXA13P31271 388 aaPredicted RBP12.5□□□□□ -0.41
VARS2-210ENST00000490699 HSD17B4P51659 736 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 RPS6P62753 249 aaKnown RBP12.5□□□□□ -0.41
VARS2-210ENST00000490699 BAATQ14032 418 aaPredicted RBP12.5□□□□□ -0.41
VARS2-210ENST00000490699 UBE2SQ16763 222 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 ARHGEF16Q5VV41 709 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 JAKMIP3Q5VZ66 844 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 GPR142Q7Z601 462 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 DPP9Q86TI2 863 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 CLEC4DQ8WXI8 215 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 ZNF396Q96N95 335 aaPredicted RBP12.5□□□□□ -0.41
VARS2-210ENST00000490699 PORCNQ9H237 461 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 EFCC1Q9HA90 598 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 A1CFQ9NQ94 594 aaKnown RBP12.5□□□□□ -0.41
VARS2-210ENST00000490699 GJB4Q9NTQ9 266 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 MTMR6Q9Y217 621 aa12.5□□□□□ -0.41
VARS2-210ENST00000490699 PLXNB2O15031 1838 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 BTBD18B2RXH4 712 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 FKTNO75072 461 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 F13A1P00488 732 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 GNRH1P01148 92 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 ZNF76P36508 570 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 GHRHRQ02643 423 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 Q3C1V9 767 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 NOM1Q5C9Z4 860 aaKnown RBP12.49□□□□□ -0.41
VARS2-210ENST00000490699 RILPL1Q5EBL4 403 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 FOXD4L5Q5VV16 416 aaPredicted RBP12.49□□□□□ -0.41
VARS2-210ENST00000490699 USP17L6PQ6QN14 398 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 PIK3AP1Q6ZUJ8 805 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.49□□□□□ -0.41
VARS2-210ENST00000490699 FERMT3Q86UX7 667 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 DNERQ8NFT8 737 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 NSUN6Q8TEA1 469 aaKnown RBP12.49□□□□□ -0.41
VARS2-210ENST00000490699 FOXD4L4Q8WXT5 416 aaPredicted RBP12.49□□□□□ -0.41
VARS2-210ENST00000490699 RMDN3Q96TC7 470 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms