RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	PPFIA3	O75145	1194 aa		21.52	■■□□□ 1.04
C4A-256	ENST00000490663	CFB	P00751	764 aa		21.52	■■□□□ 1.04
C4A-256	ENST00000490663	ALDH5A1	P51649	535 aa	Predicted RBP	21.52	■■□□□ 1.04
C4A-256	ENST00000490663	LHX8	Q68G74	356 aa		21.52	■■□□□ 1.04
C4A-256	ENST00000490663	EEPD1	Q7L9B9	569 aa		21.52	■■□□□ 1.04
C4A-256	ENST00000490663	RRP36	Q96EU6	259 aa	Known RBP	21.52	■■□□□ 1.04
C4A-256	ENST00000490663	CRISPLD2	Q9H0B8	497 aa		21.52	■■□□□ 1.04
C4A-256	ENST00000490663	FAM217B	Q9NTX9	383 aa	Predicted RBP	21.52	■■□□□ 1.04
C4A-256	ENST00000490663	DDX20	Q9UHI6	824 aa	Known RBP	21.52	■■□□□ 1.04
C4A-256	ENST00000490663	SYNGAP1	Q96PV0	1343 aa		21.52	■■□□□ 1.03
C4A-256	ENST00000490663	ADCY6	O43306	1168 aa		21.51	■■□□□ 1.03
C4A-256	ENST00000490663	FARP2	O94887	1054 aa	Predicted RBP	21.51	■■□□□ 1.03
C4A-256	ENST00000490663	ZNF865	P0CJ78	1059 aa	Predicted RBP	21.51	■■□□□ 1.03
C4A-256	ENST00000490663	PTGS1	P23219	599 aa		21.51	■■□□□ 1.03
C4A-256	ENST00000490663	GNAQ	P50148	359 aa		21.51	■■□□□ 1.03
C4A-256	ENST00000490663	MLLT1	Q03111	559 aa	Predicted RBP	21.51	■■□□□ 1.03
C4A-256	ENST00000490663	MAMDC4	Q6UXC1	1216 aa		21.51	■■□□□ 1.03
C4A-256	ENST00000490663	ZNF467	Q7Z7K2	595 aa	Predicted RBP	21.51	■■□□□ 1.03
C4A-256	ENST00000490663	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	21.51	■■□□□ 1.03
C4A-256	ENST00000490663	AGXT2	Q9BYV1	514 aa		21.51	■■□□□ 1.03
C4A-256	ENST00000490663	TM6SF1	Q9BZW5	370 aa		21.51	■■□□□ 1.03
C4A-256	ENST00000490663	PNMA2	Q9UL42	364 aa		21.51	■■□□□ 1.03
C4A-256	ENST00000490663	MRPL11	Q9Y3B7	192 aa	Known RBP	21.51	■■□□□ 1.03
C4A-256	ENST00000490663	WDR81	Q562E7	1941 aa		21.51	■■□□□ 1.03
C4A-256	ENST00000490663	MYCN	P04198	464 aa	Predicted RBP	21.5	■■□□□ 1.03
C4A-256	ENST00000490663	HOXA13	P31271	388 aa	Predicted RBP	21.5	■■□□□ 1.03
C4A-256	ENST00000490663	ADD1	P35611	737 aa	Known RBP	21.5	■■□□□ 1.03
C4A-256	ENST00000490663	METAP2	P50579	478 aa	Known RBP eCLIP	21.5	■■□□□ 1.03
C4A-256	ENST00000490663	CCT2	P78371	535 aa	Known RBP	21.5	■■□□□ 1.03
C4A-256	ENST00000490663	NOL8	Q76FK4	1167 aa	Known RBP	21.5	■■□□□ 1.03
C4A-256	ENST00000490663	FBXO16	Q8IX29	292 aa	Predicted RBP	21.5	■■□□□ 1.03
C4A-256	ENST00000490663	TAAR1	Q96RJ0	339 aa		21.5	■■□□□ 1.03
C4A-256	ENST00000490663	NCOA5	Q9HCD5	579 aa	Known RBP	21.5	■■□□□ 1.03
C4A-256	ENST00000490663	PDRG1	Q9NUG6	133 aa		21.5	■■□□□ 1.03
C4A-256	ENST00000490663	CNPY2	Q9Y2B0	182 aa		21.5	■■□□□ 1.03
C4A-256	ENST00000490663	CEP290	O15078	2479 aa		21.5	■■□□□ 1.03
C4A-256	ENST00000490663	SEPT4	O43236	478 aa		21.49	■■□□□ 1.03
C4A-256	ENST00000490663	DTNB	O60941	627 aa		21.49	■■□□□ 1.03
C4A-256	ENST00000490663	MNX1	P50219	401 aa	Predicted RBP	21.49	■■□□□ 1.03
C4A-256	ENST00000490663	IRX5	P78411	483 aa	Predicted RBP	21.49	■■□□□ 1.03
C4A-256	ENST00000490663	STK3	Q13188	491 aa		21.49	■■□□□ 1.03
C4A-256	ENST00000490663	SYTL5	Q8TDW5	730 aa	Predicted RBP	21.49	■■□□□ 1.03
C4A-256	ENST00000490663	LZTS2	Q9BRK4	669 aa		21.49	■■□□□ 1.03
C4A-256	ENST00000490663	KATNBL1	Q9H079	304 aa		21.49	■■□□□ 1.03
C4A-256	ENST00000490663	RBM28	Q9NW13	759 aa	Known RBP	21.49	■■□□□ 1.03
C4A-256	ENST00000490663	SEC63	Q9UGP8	760 aa	Known RBP	21.49	■■□□□ 1.03
C4A-256	ENST00000490663	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	21.48	■■□□□ 1.03
C4A-256	ENST00000490663	FUT2	Q10981	343 aa		21.48	■■□□□ 1.03
C4A-256	ENST00000490663	ACVR2B	Q13705	512 aa		21.48	■■□□□ 1.03
C4A-256	ENST00000490663	TMEM63B	Q5T3F8	832 aa		21.48	■■□□□ 1.03
C4A-256	ENST00000490663	PAWR	Q96IZ0	340 aa	Known RBP	21.48	■■□□□ 1.03
C4A-256	ENST00000490663	PDGFC	Q9NRA1	345 aa		21.48	■■□□□ 1.03
C4A-256	ENST00000490663	OGDHL	Q9ULD0	1010 aa		21.48	■■□□□ 1.03
C4A-256	ENST00000490663	CCDC144B	Q3MJ40	725 aa		21.47	■■□□□ 1.03
C4A-256	ENST00000490663	GJC2	Q5T442	439 aa	Predicted RBP	21.47	■■□□□ 1.03
C4A-256	ENST00000490663	MSL3	Q8N5Y2	521 aa	Known RBP	21.47	■■□□□ 1.03
C4A-256	ENST00000490663	ADD3	Q9UEY8	706 aa	Known RBP	21.47	■■□□□ 1.03
C4A-256	ENST00000490663	NID2	Q14112	1375 aa		21.47	■■□□□ 1.03
C4A-256	ENST00000490663	ASB14	A6NK59	587 aa		21.46	■■□□□ 1.03
C4A-256	ENST00000490663	EIF2AK2	P19525	551 aa	Known RBP	21.46	■■□□□ 1.03
C4A-256	ENST00000490663	SMARCA1	P28370	1054 aa		21.46	■■□□□ 1.03
C4A-256	ENST00000490663	PDIA3	P30101	505 aa	Known RBP	21.46	■■□□□ 1.03
C4A-256	ENST00000490663	ADCYAP1R1	P41586	468 aa		21.46	■■□□□ 1.03
C4A-256	ENST00000490663	ANAPC15	P60006	121 aa		21.46	■■□□□ 1.03
C4A-256	ENST00000490663	HEATR3	Q7Z4Q2	680 aa		21.46	■■□□□ 1.03
C4A-256	ENST00000490663	UBE2Q1	Q7Z7E8	422 aa		21.46	■■□□□ 1.03
C4A-256	ENST00000490663	MCF2L2	Q86YR7	1114 aa		21.46	■■□□□ 1.03
C4A-256	ENST00000490663	PHKB	Q93100	1093 aa		21.46	■■□□□ 1.03
C4A-256	ENST00000490663	ZFP91	Q96JP5	570 aa	Predicted RBP	21.46	■■□□□ 1.03
C4A-256	ENST00000490663	ABHD16B	Q9H3Z7	469 aa		21.46	■■□□□ 1.03
C4A-256	ENST00000490663	TRIP12	Q14669	1992 aa	Predicted RBP	21.45	■■□□□ 1.02
C4A-256	ENST00000490663	PGK1	P00558	417 aa		21.45	■■□□□ 1.02
C4A-256	ENST00000490663	AKR1A1	P14550	325 aa		21.45	■■□□□ 1.02
C4A-256	ENST00000490663	HSD17B4	P51659	736 aa		21.45	■■□□□ 1.02
C4A-256	ENST00000490663	AK2	P54819	239 aa		21.45	■■□□□ 1.02
C4A-256	ENST00000490663	WWC2	Q6AWC2	1192 aa		21.45	■■□□□ 1.02
C4A-256	ENST00000490663	FCHSD1	Q86WN1	690 aa		21.45	■■□□□ 1.02
C4A-256	ENST00000490663	FBXL16	Q8N461	479 aa		21.45	■■□□□ 1.02
C4A-256	ENST00000490663	RGS22	Q8NE09	1264 aa		21.45	■■□□□ 1.02
C4A-256	ENST00000490663		V9GY48	417 aa	Predicted RBP	21.45	■■□□□ 1.02
C4A-256	ENST00000490663	MYADML2	A6NDP7	307 aa		21.44	■■□□□ 1.02
C4A-256	ENST00000490663	PDE4D	Q08499	809 aa		21.44	■■□□□ 1.02
C4A-256	ENST00000490663	TYW1B	Q6NUM6	668 aa		21.44	■■□□□ 1.02
C4A-256	ENST00000490663	USP17L6P	Q6QN14	398 aa		21.44	■■□□□ 1.02
C4A-256	ENST00000490663	IL31RA	Q8NI17	732 aa		21.44	■■□□□ 1.02
C4A-256	ENST00000490663	RMDN3	Q96TC7	470 aa		21.44	■■□□□ 1.02
C4A-256	ENST00000490663	XPNPEP3	Q9NQH7	507 aa		21.44	■■□□□ 1.02
C4A-256	ENST00000490663	NRBP1	Q9UHY1	535 aa		21.44	■■□□□ 1.02
C4A-256	ENST00000490663	MSC	O60682	206 aa		21.43	■■□□□ 1.02
C4A-256	ENST00000490663	RARB	P10826	455 aa		21.43	■■□□□ 1.02
C4A-256	ENST00000490663	RCAN1	P53805	252 aa		21.43	■■□□□ 1.02
C4A-256	ENST00000490663	UBE2S	Q16763	222 aa		21.43	■■□□□ 1.02
C4A-256	ENST00000490663	TAPT1	Q6NXT6	567 aa		21.43	■■□□□ 1.02
C4A-256	ENST00000490663	MORC4	Q8TE76	937 aa		21.43	■■□□□ 1.02
C4A-256	ENST00000490663	PXMP2	Q9NR77	195 aa		21.43	■■□□□ 1.02
C4A-256	ENST00000490663	PCDH10	Q9P2E7	1040 aa		21.43	■■□□□ 1.02
C4A-256	ENST00000490663	FAM184B	Q9ULE4	1060 aa		21.43	■■□□□ 1.02
C4A-256	ENST00000490663	SYNRG	Q9UMZ2	1314 aa		21.43	■■□□□ 1.02
C4A-256	ENST00000490663	GCOM1	H8Y6P7	765 aa	Predicted RBP	21.42	■■□□□ 1.02
C4A-256	ENST00000490663	LARGE1	O95461	756 aa		21.42	■■□□□ 1.02

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms