RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 SCRN1Q12765 414 aa16.64■□□□□ 0.25
SRGAP3-208ENST00000490348 ANKRD1Q15327 319 aa16.64■□□□□ 0.25
SRGAP3-208ENST00000490348 GPKOWQ92917 476 aaPredicted RBP eCLIP16.64■□□□□ 0.25
SRGAP3-208ENST00000490348 PHKBQ93100 1093 aa16.64■□□□□ 0.25
SRGAP3-208ENST00000490348 TINF2Q9BSI4 451 aa16.64■□□□□ 0.25
SRGAP3-208ENST00000490348 SEC63Q9UGP8 760 aaKnown RBP16.64■□□□□ 0.25
SRGAP3-208ENST00000490348 CCDC85CA6NKD9 419 aa16.63■□□□□ 0.25
SRGAP3-208ENST00000490348 PFKFB2O60825 505 aa16.63■□□□□ 0.25
SRGAP3-208ENST00000490348 CALML3P27482 149 aa16.63■□□□□ 0.25
SRGAP3-208ENST00000490348 CCND3P30281 292 aaPredicted RBP16.63■□□□□ 0.25
SRGAP3-208ENST00000490348 ME3Q16798 604 aa16.63■□□□□ 0.25
SRGAP3-208ENST00000490348 PRAMEF19Q5SWL8 479 aa16.63■□□□□ 0.25
SRGAP3-208ENST00000490348 WWC2Q6AWC2 1192 aa16.63■□□□□ 0.25
SRGAP3-208ENST00000490348 TYW1BQ6NUM6 668 aa16.63■□□□□ 0.25
SRGAP3-208ENST00000490348 MAMDC4Q6UXC1 1216 aa16.63■□□□□ 0.25
SRGAP3-208ENST00000490348 ZNF467Q7Z7K2 595 aaPredicted RBP16.63■□□□□ 0.25
SRGAP3-208ENST00000490348 SYTL5Q8TDW5 730 aaPredicted RBP16.63■□□□□ 0.25
SRGAP3-208ENST00000490348 RBBP6Q7Z6E9 1792 aaKnown RBP16.62■□□□□ 0.25
SRGAP3-208ENST00000490348 DTNBO60941 627 aa16.62■□□□□ 0.25
SRGAP3-208ENST00000490348 SNAI1O95863 264 aaPredicted RBP16.62■□□□□ 0.25
SRGAP3-208ENST00000490348 CYBAP13498 195 aa16.62■□□□□ 0.25
SRGAP3-208ENST00000490348 IFNAR1P17181 557 aa16.62■□□□□ 0.25
SRGAP3-208ENST00000490348 HSD17B4P51659 736 aa16.62■□□□□ 0.25
SRGAP3-208ENST00000490348 UBXN2AP68543 259 aa16.62■□□□□ 0.25
SRGAP3-208ENST00000490348 PKN1Q16512 942 aa16.62■□□□□ 0.25
SRGAP3-208ENST00000490348 MFSD14CQ5VZR4 134 aa16.62■□□□□ 0.25
SRGAP3-208ENST00000490348 PAK6Q9NQU5 681 aaPredicted RBP16.62■□□□□ 0.25
SRGAP3-208ENST00000490348 MCM3APO60318 1980 aa16.62■□□□□ 0.25
SRGAP3-208ENST00000490348 HOXA13P31271 388 aaPredicted RBP16.61■□□□□ 0.25
SRGAP3-208ENST00000490348 ST3GAL1Q11201 340 aa16.61■□□□□ 0.25
SRGAP3-208ENST00000490348 HEATR3Q7Z4Q2 680 aa16.61■□□□□ 0.25
SRGAP3-208ENST00000490348 MCF2L2Q86YR7 1114 aa16.61■□□□□ 0.25
SRGAP3-208ENST00000490348 NECAB1Q8N987 351 aa16.61■□□□□ 0.25
SRGAP3-208ENST00000490348 SHISA4Q96DD7 197 aa16.61■□□□□ 0.25
SRGAP3-208ENST00000490348 RNF208Q9H0X6 261 aa16.61■□□□□ 0.25
SRGAP3-208ENST00000490348 RPTORQ8N122 1335 aa16.61■□□□□ 0.25
SRGAP3-208ENST00000490348 SYNGAP1Q96PV0 1343 aa16.61■□□□□ 0.25
SRGAP3-208ENST00000490348 POTEFA5A3E0 1075 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 PRPF3O43395 683 aaKnown RBP16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 CTDNEP1O95476 244 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 CFBP00751 764 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 RABEP1Q15276 862 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 PFKFB3Q16875 520 aaPredicted RBP16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 ARMCX2Q7L311 632 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 MSL3Q8N5Y2 521 aaKnown RBP16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 MAF1Q9H063 256 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 KATNBL1Q9H079 304 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 SLKQ9H2G2 1235 aaPredicted RBP16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 TNRC18O15417 2968 aaPredicted RBP16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 STXBP3O00186 592 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 CD2BP2O95400 341 aaKnown RBP16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 ALDH5A1P51649 535 aaPredicted RBP16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 SOX10P56693 466 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 TRAF1Q13077 416 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 MORC4Q8TE76 937 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 GTF3C6Q969F1 213 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 TAAR1Q96RJ0 339 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 SLC26A6Q9BXS9 759 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 RNF26Q9BY78 433 aaPredicted RBP16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 HMX1Q9NP08 348 aaPredicted RBP16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 BARHL2Q9NY43 387 aa16.6■□□□□ 0.25
SRGAP3-208ENST00000490348 MEIS2O14770 477 aa16.59■□□□□ 0.25
SRGAP3-208ENST00000490348 ZNF865P0CJ78 1059 aaPredicted RBP16.59■□□□□ 0.25
SRGAP3-208ENST00000490348 SCG2P13521 617 aa16.59■□□□□ 0.25
SRGAP3-208ENST00000490348 LIMCH1Q9UPQ0 1083 aa16.59■□□□□ 0.25
SRGAP3-208ENST00000490348 GCOM1H8Y6P7 765 aaPredicted RBP16.58■□□□□ 0.24
SRGAP3-208ENST00000490348 GJB1P08034 283 aa16.58■□□□□ 0.24
SRGAP3-208ENST00000490348 POLR2MP0CAP2 368 aa16.58■□□□□ 0.24
SRGAP3-208ENST00000490348 EDNRBP24530 442 aa16.58■□□□□ 0.24
SRGAP3-208ENST00000490348 LHX8Q68G74 356 aa16.58■□□□□ 0.24
SRGAP3-208ENST00000490348 USP17L6PQ6QN14 398 aa16.58■□□□□ 0.24
SRGAP3-208ENST00000490348 DNERQ8NFT8 737 aa16.58■□□□□ 0.24
SRGAP3-208ENST00000490348 DEFB118Q96PH6 123 aa16.58■□□□□ 0.24
SRGAP3-208ENST00000490348 ADD3Q9UEY8 706 aaKnown RBP16.58■□□□□ 0.24
SRGAP3-208ENST00000490348 LRRC37A2A6NM11 1700 aa16.57■□□□□ 0.24
SRGAP3-208ENST00000490348 PIK3CDO00329 1044 aa16.57■□□□□ 0.24
SRGAP3-208ENST00000490348 CPLX1O14810 134 aa16.57■□□□□ 0.24
SRGAP3-208ENST00000490348 ADAMTS3O15072 1205 aa16.57■□□□□ 0.24
SRGAP3-208ENST00000490348 RMDN3Q96TC7 470 aa16.57■□□□□ 0.24
SRGAP3-208ENST00000490348 PSTPIP2Q9H939 334 aa16.57■□□□□ 0.24
SRGAP3-208ENST00000490348 MAP3K20Q9NYL2 800 aaKnown RBP16.57■□□□□ 0.24
SRGAP3-208ENST00000490348 NRBP1Q9UHY1 535 aa16.57■□□□□ 0.24
SRGAP3-208ENST00000490348 ASB14A6NK59 587 aa16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 ADCY6O43306 1168 aa16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 CAPN15O75808 1086 aa16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 EN2P19622 333 aaPredicted RBP16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 GJA8P48165 433 aa16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 NAPAP54920 295 aa16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 ACVR2BQ13705 512 aa16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 PPP1R18Q6NYC8 613 aa16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 SAMD3Q8N6K7 520 aa16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 U2AF1L4Q8WU68 220 aaKnown RBP16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 AIFM3Q96NN9 605 aa16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 PXMP2Q9NR77 195 aa16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 CNPY2Q9Y2B0 182 aa16.56■□□□□ 0.24
SRGAP3-208ENST00000490348 hCG_1984214I3L0E3 225 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 SEPT4O43236 478 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 EIF2AK2P19525 551 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms