RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 DDX49Q9Y6V7 483 aaKnown RBP11.4□□□□□ -0.58
TMEM39A-210ENST00000490099 LCTP09848 1927 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 SGSM2O43147 1006 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 ASGR1P07306 291 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 CLTBP09497 229 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 C6orf222P0C671 652 aaPredicted RBP11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 RPS6P62753 249 aaKnown RBP11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 GHRHRQ02643 423 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 PTH1RQ03431 593 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 GNASQ5JWF2 1037 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 TMEM63BQ5T3F8 832 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 FAM109BQ6ICB4 259 aaPredicted RBP11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 NSMFQ6X4W1 530 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 ZNF579Q8NAF0 562 aaKnown RBP11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 RUFY2Q8WXA3 655 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 MAP4K1Q92918 833 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 BADQ92934 168 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 MTMR8Q96EF0 704 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 GLT1D1Q96MS3 346 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 UBA5Q9GZZ9 404 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 SPC25Q9HBM1 224 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 STARD7Q9NQZ5 370 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 PRKAG2Q9UGJ0 569 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 LTBP2Q14767 1821 aa11.39□□□□□ -0.59
TMEM39A-210ENST00000490099 GRIN2DO15399 1336 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 TNKSO95271 1327 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 ARVCFO00192 962 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 CD4P01730 458 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 CYP21A2P08686 494 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 GOLGA8HP0CJ92 632 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 CHRM1P11229 460 aaPredicted RBP11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 ALDH5A1P51649 535 aaPredicted RBP11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 IRX6P78412 446 aaPredicted RBP11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 SHHQ15465 462 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 DUSP28Q4G0W2 176 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 SLC30A10Q6XR72 485 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 RNF207Q6ZRF8 634 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 CYB5R4Q7L1T6 521 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 FAM126BQ8IXS8 530 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 ADGRF4Q8IZF3 695 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 DNERQ8NFT8 737 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 SEZ6LQ9BYH1 1024 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 CPVLQ9H3G5 476 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 KAT14Q9H8E8 782 aa11.38□□□□□ -0.59
TMEM39A-210ENST00000490099 DCDC2CA8MYV0 355 aa11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 PQBP1O60828 265 aaKnown RBP11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 CABYRO75952 493 aa11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 EPHB4P54760 987 aa11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 FSCN1Q16658 493 aaKnown RBP11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 SLC35G1Q2M3R5 365 aa11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 C9orf50Q5SZB4 431 aa11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 TLK2Q86UE8 772 aa11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 FBXO16Q8IX29 292 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 TBC1D5Q92609 795 aa11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 UBAC1Q9BSL1 405 aa11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 JMJD4Q9H9V9 463 aa11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 TMEM39AQ9NV64 488 aa11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 MTMR10Q9NXD2 777 aa11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 TAF6LQ9Y6J9 622 aa11.37□□□□□ -0.59
TMEM39A-210ENST00000490099 ABCB11O95342 1321 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 MROH7Q68CQ1 1323 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 A0A0U1RQG5 324 aaPredicted RBP11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 OPLAHO14841 1288 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 DYNC1LI2O43237 492 aaPredicted RBP11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 TIMP1P01033 207 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 PARP1P09874 1014 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 PTGS1P23219 599 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 BEX3Q00994 111 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 TROAPQ12815 778 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 CDC37Q16543 378 aaPredicted RBP11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 QRICH1Q2TAL8 776 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 CCDC62Q6P9F0 684 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 CXCL17Q6UXB2 119 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 KIAA1211Q6ZU35 1233 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 STOX1Q6ZVD7 989 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 EEPD1Q7L9B9 569 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 STAG2Q8N3U4 1231 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 SYTL5Q8TDW5 730 aaPredicted RBP11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 AP5M1Q9H0R1 490 aa11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 PRDM5Q9NQX1 630 aaPredicted RBP11.36□□□□□ -0.59
TMEM39A-210ENST00000490099 LRRC37A2A6NM11 1700 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 PTPDC1A2A3K4 754 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 A6NJR5 290 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 KLRF2D3W0D1 207 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 E7EWF7 191 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 RAG1P15918 1043 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 CALML3P27482 149 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 IFIT1BQ5T764 474 aaKnown RBP11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 MFSD5Q6N075 450 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 C16orf59Q7L2K0 433 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 DEFB123Q8N688 67 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 IGDCC4Q8TDY8 1250 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 MTA3Q9BTC8 594 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 WDR11Q9BZH6 1224 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 RIOX1Q9H6W3 641 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 COL20A1Q9P218 1284 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 MAD2L2Q9UI95 211 aa11.35□□□□□ -0.59
TMEM39A-210ENST00000490099 B4DLN1 442 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms