RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ALDH8A1Q9H2A2 487 aaPredicted RBP20.07■□□□□ 0.8
TOP3B-217ENST00000489581 CHD7Q9P2D1 2997 aa20.07■□□□□ 0.8
TOP3B-217ENST00000489581 SLC4A7Q9Y6M7 1214 aa20.07■□□□□ 0.8
TOP3B-217ENST00000489581 PRRC2BQ5JSZ5 2229 aaKnown RBP20.07■□□□□ 0.8
TOP3B-217ENST00000489581 ZBBXA8MT70 800 aa20.06■□□□□ 0.8
TOP3B-217ENST00000489581 MYOGP15173 224 aa20.06■□□□□ 0.8
TOP3B-217ENST00000489581 MRPS5P82675 430 aaKnown RBP20.06■□□□□ 0.8
TOP3B-217ENST00000489581 BAATQ14032 418 aaPredicted RBP20.06■□□□□ 0.8
TOP3B-217ENST00000489581 DUSP28Q4G0W2 176 aa20.06■□□□□ 0.8
TOP3B-217ENST00000489581 MORC4Q8TE76 937 aa20.06■□□□□ 0.8
TOP3B-217ENST00000489581 VWCEQ96DN2 955 aa20.06■□□□□ 0.8
TOP3B-217ENST00000489581 TRIP12Q14669 1992 aaPredicted RBP20.05■□□□□ 0.8
TOP3B-217ENST00000489581 NFIBO00712 420 aa20.05■□□□□ 0.8
TOP3B-217ENST00000489581 CYP2C9P11712 490 aa20.05■□□□□ 0.8
TOP3B-217ENST00000489581 ALDH5A1P51649 535 aaPredicted RBP20.05■□□□□ 0.8
TOP3B-217ENST00000489581 VPS53Q5VIR6 699 aa20.05■□□□□ 0.8
TOP3B-217ENST00000489581 DCAF4Q8WV16 495 aa20.05■□□□□ 0.8
TOP3B-217ENST00000489581 WDR11Q9BZH6 1224 aa20.05■□□□□ 0.8
TOP3B-217ENST00000489581 RANBP17Q9H2T7 1088 aaKnown RBP20.05■□□□□ 0.8
TOP3B-217ENST00000489581 TRMT13Q9NUP7 481 aaKnown RBP20.05■□□□□ 0.8
TOP3B-217ENST00000489581 PCDHB15Q9Y5E8 787 aa20.05■□□□□ 0.8
TOP3B-217ENST00000489581 PTPDC1A2A3K4 754 aa20.04■□□□□ 0.8
TOP3B-217ENST00000489581 MYL3P08590 195 aa20.04■□□□□ 0.8
TOP3B-217ENST00000489581 COL9A1P20849 921 aa20.04■□□□□ 0.8
TOP3B-217ENST00000489581 PPP2R2DQ66LE6 453 aa20.04■□□□□ 0.8
TOP3B-217ENST00000489581 MICALL1Q8N3F8 863 aa20.04■□□□□ 0.8
TOP3B-217ENST00000489581 ADAMTS19Q8TE59 1207 aa20.04■□□□□ 0.8
TOP3B-217ENST00000489581 TOMM22Q9NS69 142 aa20.04■□□□□ 0.8
TOP3B-217ENST00000489581 POLR3EQ9NVU0 708 aa20.04■□□□□ 0.8
TOP3B-217ENST00000489581 ADD3Q9UEY8 706 aaKnown RBP20.04■□□□□ 0.8
TOP3B-217ENST00000489581 ANAPC4Q9UJX5 808 aa20.04■□□□□ 0.8
TOP3B-217ENST00000489581 FRMPD2Q68DX3 1309 aaPredicted RBP20.03■□□□□ 0.8
TOP3B-217ENST00000489581 TET1Q8NFU7 2136 aa20.03■□□□□ 0.8
TOP3B-217ENST00000489581 SCN10AQ9Y5Y9 1956 aa20.03■□□□□ 0.8
TOP3B-217ENST00000489581 ATP2A2P16615 1042 aaKnown RBP20.03■□□□□ 0.8
TOP3B-217ENST00000489581 MX1P20591 662 aa20.03■□□□□ 0.8
TOP3B-217ENST00000489581 NOVP48745 357 aa20.03■□□□□ 0.8
TOP3B-217ENST00000489581 PURAQ00577 322 aaKnown RBP20.03■□□□□ 0.8
TOP3B-217ENST00000489581 TTLL4Q14679 1199 aa20.03■□□□□ 0.8
TOP3B-217ENST00000489581 SYDE2Q5VT97 1194 aa20.03■□□□□ 0.8
TOP3B-217ENST00000489581 DEFB128Q7Z7B8 93 aa20.03■□□□□ 0.8
TOP3B-217ENST00000489581 GPCPD1Q9NPB8 672 aa20.03■□□□□ 0.8
TOP3B-217ENST00000489581 PCDHA11Q9Y5I1 949 aa20.03■□□□□ 0.8
TOP3B-217ENST00000489581 TNKSO95271 1327 aa20.02■□□□□ 0.8
TOP3B-217ENST00000489581 ORC4O43929 436 aa20.02■□□□□ 0.8
TOP3B-217ENST00000489581 SUPT20HL2P0C7V6 817 aa20.02■□□□□ 0.8
TOP3B-217ENST00000489581 RRP12Q5JTH9 1297 aaKnown RBP20.02■□□□□ 0.8
TOP3B-217ENST00000489581 BTNL9Q6UXG8 535 aa20.02■□□□□ 0.8
TOP3B-217ENST00000489581 IL27Q8NEV9 243 aa20.02■□□□□ 0.8
TOP3B-217ENST00000489581 OR6J1Q8NGC5 347 aa20.02■□□□□ 0.8
TOP3B-217ENST00000489581 PPP1R13LQ8WUF5 828 aa20.02■□□□□ 0.8
TOP3B-217ENST00000489581 UHRF1Q96T88 793 aaPredicted RBP20.02■□□□□ 0.8
TOP3B-217ENST00000489581 GPHNQ9NQX3 736 aaPredicted RBP20.02■□□□□ 0.8
TOP3B-217ENST00000489581 CALML3P27482 149 aa20.01■□□□□ 0.79
TOP3B-217ENST00000489581 FAM47CQ5HY64 1035 aa20.01■□□□□ 0.79
TOP3B-217ENST00000489581 SLC30A10Q6XR72 485 aa20.01■□□□□ 0.79
TOP3B-217ENST00000489581 TMEM47Q9BQJ4 181 aa20.01■□□□□ 0.79
TOP3B-217ENST00000489581 RBM47A0AV96 593 aaKnown RBP20■□□□□ 0.79
TOP3B-217ENST00000489581 RFXAPO00287 272 aa20■□□□□ 0.79
TOP3B-217ENST00000489581 PFKMP08237 780 aa20■□□□□ 0.79
TOP3B-217ENST00000489581 FGRP09769 529 aa20■□□□□ 0.79
TOP3B-217ENST00000489581 TOP1P11387 765 aaKnown RBP20■□□□□ 0.79
TOP3B-217ENST00000489581 CPT1AP50416 773 aa20■□□□□ 0.79
TOP3B-217ENST00000489581 NBPF20Q3BBV1 942 aa20■□□□□ 0.79
TOP3B-217ENST00000489581 CLEC4DQ8WXI8 215 aa20■□□□□ 0.79
TOP3B-217ENST00000489581 MTG1Q9BT17 334 aaPredicted RBP20■□□□□ 0.79
TOP3B-217ENST00000489581 TSPYL2Q9H2G4 693 aaPredicted RBP20■□□□□ 0.79
TOP3B-217ENST00000489581 RAPGEFL1Q9UHV5 662 aa20■□□□□ 0.79
TOP3B-217ENST00000489581 REV3LO60673 3130 aa20■□□□□ 0.79
TOP3B-217ENST00000489581 LOC102724159A0A0B4J2E5 919 aa19.99■□□□□ 0.79
TOP3B-217ENST00000489581 PWP2Q15269 919 aaKnown RBP19.99■□□□□ 0.79
TOP3B-217ENST00000489581 ALX1Q15699 326 aa19.99■□□□□ 0.79
TOP3B-217ENST00000489581 TMEM67Q5HYA8 995 aa19.99■□□□□ 0.79
TOP3B-217ENST00000489581 RNF207Q6ZRF8 634 aa19.99■□□□□ 0.79
TOP3B-217ENST00000489581 COPS5Q92905 334 aa19.99■□□□□ 0.79
TOP3B-217ENST00000489581 SALL3Q9BXA9 1300 aa19.99■□□□□ 0.79
TOP3B-217ENST00000489581 FGAP02671 866 aa19.98■□□□□ 0.79
TOP3B-217ENST00000489581 CA3P07451 260 aa19.98■□□□□ 0.79
TOP3B-217ENST00000489581 PDHBP11177 359 aa19.98■□□□□ 0.79
TOP3B-217ENST00000489581 PDE4DQ08499 809 aa19.98■□□□□ 0.79
TOP3B-217ENST00000489581 PPP2R5BQ15173 497 aa19.98■□□□□ 0.79
TOP3B-217ENST00000489581 EVI5LQ96CN4 794 aa19.98■□□□□ 0.79
TOP3B-217ENST00000489581 NECAB3Q96P71 396 aaPredicted RBP19.98■□□□□ 0.79
TOP3B-217ENST00000489581 CERS4Q9HA82 394 aa19.98■□□□□ 0.79
TOP3B-217ENST00000489581 HELLSQ9NRZ9 838 aa19.98■□□□□ 0.79
TOP3B-217ENST00000489581 BDP1A6H8Y1 2624 aa19.98■□□□□ 0.79
TOP3B-217ENST00000489581 RPS6P62753 249 aaKnown RBP19.97■□□□□ 0.79
TOP3B-217ENST00000489581 TFF2Q03403 129 aa19.97■□□□□ 0.79
TOP3B-217ENST00000489581 SKIV2LQ15477 1246 aaKnown RBP19.97■□□□□ 0.79
TOP3B-217ENST00000489581 BRDTQ58F21 947 aaPredicted RBP19.97■□□□□ 0.79
TOP3B-217ENST00000489581 FAM227BQ96M60 508 aa19.97■□□□□ 0.79
TOP3B-217ENST00000489581 TCP11L1Q9NUJ3 509 aa19.97■□□□□ 0.79
TOP3B-217ENST00000489581 ZBTB47Q9UFB7 747 aaPredicted RBP19.97■□□□□ 0.79
TOP3B-217ENST00000489581 NKRFO15226 690 aaKnown RBP eCLIP19.96■□□□□ 0.79
TOP3B-217ENST00000489581 ACTN1P12814 892 aa19.96■□□□□ 0.79
TOP3B-217ENST00000489581 CHMP4BP1P59074 171 aa19.96■□□□□ 0.79
TOP3B-217ENST00000489581 HAND2P61296 217 aa19.96■□□□□ 0.79
TOP3B-217ENST00000489581 ANKRD45Q5TZF3 282 aa19.96■□□□□ 0.79
TOP3B-217ENST00000489581 NFRKBQ6P4R8 1299 aa19.96■□□□□ 0.79
TOP3B-217ENST00000489581 RETREG2Q8NC44 543 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms