RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 INCENPQ9NQS7 918 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 KCNQ5Q9NR82 932 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 IL17RBQ9NRM6 502 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 PKD2L1Q9P0L9 805 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 SAP30BPQ9UHR5 308 aaKnown RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 MAD2L2Q9UI95 211 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 KCNH3Q9ULD8 1083 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 JAG2Q9Y219 1238 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 CLIC4Q9Y696 253 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 TACC3Q9Y6A5 838 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 MYO5AQ9Y4I1 1855 aaKnown RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 SCN4AP35499 1836 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 IGKV6D-41A0A0C4DH26 115 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 IKBKBO14920 756 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 HOXA2O43364 376 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 NEMFO60524 1076 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 EGFRP00533 1210 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 HSPA1AP0DMV8 641 aaKnown RBP7.23□□□□□ -1.25
SF3A3-208ENST00000489537 HSPA1BP0DMV9 641 aaKnown RBP7.23□□□□□ -1.25
SF3A3-208ENST00000489537 SNHG28P0DPA3 235 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 CYP2D6P10635 497 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 GCFC2P16383 781 aaKnown RBP7.23□□□□□ -1.25
SF3A3-208ENST00000489537 LIG1P18858 919 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 EPHX2P34913 555 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 PPP1R2P41236 205 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 MMP16P51512 607 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 HIRAP54198 1017 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-208ENST00000489537 CXCL9Q07325 125 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 PICALMQ13492 652 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 SNW1Q13573 536 aaKnown RBP7.23□□□□□ -1.25
SF3A3-208ENST00000489537 EAPPQ56P03 285 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-208ENST00000489537 TTC38Q5R3I4 469 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 AXDND1Q5T1B0 1012 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-208ENST00000489537 ZSCAN30Q86W11 494 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 ZSCAN29Q8IWY8 852 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-208ENST00000489537 STK11IPQ8N1F8 1099 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 CCDC82Q8N4S0 544 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 CERS5Q8N5B7 392 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 KCTD17Q8N5Z5 321 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 IQUBQ8NA54 791 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 CNNM3Q8NE01 707 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 GMCL1P1Q8NEA9 526 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 DYNLL2Q96FJ2 89 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 CEP95Q96GE4 821 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 ARHGEF10LQ9HCE6 1279 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 RMND1Q9NWS8 449 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 HPSEQ9Y251 543 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 GJA3Q9Y6H8 435 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 MYH2Q9UKX2 1941 aa7.23□□□□□ -1.25
SF3A3-208ENST00000489537 NAV1Q8NEY1 1877 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 PNMA6FA0A0J9YX94 578 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 KIF28PB7ZC32 967 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 F8W031 263 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-208ENST00000489537 CBFA2T2O43439 604 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 PLEKHA8P1O95397 391 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 FOSP01100 380 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-208ENST00000489537 PFKFB1P16118 471 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 VEGFBP49765 207 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 NAPAP54920 295 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 ATP2C1P98194 919 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-208ENST00000489537 AMPD3Q01432 767 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 TRIM32Q13049 653 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 NONOQ15233 471 aaKnown RBP eCLIP7.22□□□□□ -1.25
SF3A3-208ENST00000489537 CAMK4Q16566 473 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 CFAP100Q494V2 611 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 CST9Q5W186 159 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 OTUD7BQ6GQQ9 843 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 TATDN1Q6P1N9 297 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 SARM1Q6SZW1 724 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 KRBA2Q6ZNG9 492 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 LDHDQ86WU2 507 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 RAB11FIP4Q86YS3 637 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 KIAA0825Q8IV33 1275 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 SAMD3Q8N6K7 520 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 MLKLQ8NB16 471 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 FAM151AQ8WW52 585 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 GMCL1Q96IK5 515 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 GSDMAQ96QA5 445 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 REPIN1Q9BWE0 567 aaKnown RBP7.22□□□□□ -1.25
SF3A3-208ENST00000489537 VPS54Q9P1Q0 977 aa7.22□□□□□ -1.25
SF3A3-208ENST00000489537 CNTNAP1P78357 1384 aa7.21□□□□□ -1.25
SF3A3-208ENST00000489537 SCN9AQ15858 1988 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 A0A1B0GVL5 298 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 ESPNB1AK53 854 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 MPHOSPH10O00566 681 aaKnown RBP7.21□□□□□ -1.26
SF3A3-208ENST00000489537 ZBTB5O15062 677 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 FOXN1O15353 648 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 PLA2G6O60733 806 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 RAD17O75943 681 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 DXOO77932 396 aaKnown RBP7.21□□□□□ -1.26
SF3A3-208ENST00000489537 SLFN14P0C7P3 912 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 FDX1P10109 184 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 PDHBP11177 359 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 MARCKSP29966 332 aaPredicted RBP7.21□□□□□ -1.26
SF3A3-208ENST00000489537 CDC25BP30305 580 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 GUCY1A2P33402 732 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 SHMT1P34896 483 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 SLC1A4P43007 532 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 GMPSP49915 693 aaPredicted RBP7.21□□□□□ -1.26
SF3A3-208ENST00000489537 ADCY7P51828 1080 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms