RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 Q6ZUG5 572 aa18.26■□□□□ 0.51
LMX1A-204ENST00000489443 MCF2L2Q86YR7 1114 aa18.26■□□□□ 0.51
LMX1A-204ENST00000489443 CCDC82Q8N4S0 544 aa18.26■□□□□ 0.51
LMX1A-204ENST00000489443 SRBD1Q8N5C6 995 aaKnown RBP18.26■□□□□ 0.51
LMX1A-204ENST00000489443 SPZ1Q9BXG8 430 aa18.26■□□□□ 0.51
LMX1A-204ENST00000489443 FAM184BQ9ULE4 1060 aa18.26■□□□□ 0.51
LMX1A-204ENST00000489443 KLF18A0A0U1RQI7 1052 aa18.25■□□□□ 0.51
LMX1A-204ENST00000489443 ZBTB43O43298 467 aa18.25■□□□□ 0.51
LMX1A-204ENST00000489443 RARBP10826 455 aa18.25■□□□□ 0.51
LMX1A-204ENST00000489443 AKR1A1P14550 325 aa18.25■□□□□ 0.51
LMX1A-204ENST00000489443 ALDH5A1P51649 535 aaPredicted RBP18.25■□□□□ 0.51
LMX1A-204ENST00000489443 TRAF1Q13077 416 aa18.25■□□□□ 0.51
LMX1A-204ENST00000489443 ARRDC4Q8NCT1 418 aa18.25■□□□□ 0.51
LMX1A-204ENST00000489443 DPF3Q92784 378 aa18.25■□□□□ 0.51
LMX1A-204ENST00000489443 RRP36Q96EU6 259 aaKnown RBP18.25■□□□□ 0.51
LMX1A-204ENST00000489443 CFBP00751 764 aa18.24■□□□□ 0.51
LMX1A-204ENST00000489443 SMARCA1P28370 1054 aa18.24■□□□□ 0.51
LMX1A-204ENST00000489443 APOBRQ0VD83 1088 aa18.24■□□□□ 0.51
LMX1A-204ENST00000489443 CCDC144BQ3MJ40 725 aa18.24■□□□□ 0.51
LMX1A-204ENST00000489443 GJC2Q5T442 439 aaPredicted RBP18.24■□□□□ 0.51
LMX1A-204ENST00000489443 EEPD1Q7L9B9 569 aa18.24■□□□□ 0.51
LMX1A-204ENST00000489443 BRF1Q92994 677 aa18.24■□□□□ 0.51
LMX1A-204ENST00000489443 LENG1Q96BZ8 264 aaPredicted RBP18.24■□□□□ 0.51
LMX1A-204ENST00000489443 HTATIP2Q9BUP3 242 aa18.24■□□□□ 0.51
LMX1A-204ENST00000489443 C11orf49Q9H6J7 331 aa18.24■□□□□ 0.51
LMX1A-204ENST00000489443 XPNPEP3Q9NQH7 507 aa18.24■□□□□ 0.51
LMX1A-204ENST00000489443 SEC63Q9UGP8 760 aaKnown RBP18.24■□□□□ 0.51
LMX1A-204ENST00000489443 RTN1Q16799 776 aa18.23■□□□□ 0.51
LMX1A-204ENST00000489443 TMTC3Q6ZXV5 915 aa18.23■□□□□ 0.51
LMX1A-204ENST00000489443 RUFY3Q7L099 469 aa18.23■□□□□ 0.51
LMX1A-204ENST00000489443 SYTL5Q8TDW5 730 aaPredicted RBP18.23■□□□□ 0.51
LMX1A-204ENST00000489443 TAAR1Q96RJ0 339 aa18.23■□□□□ 0.51
LMX1A-204ENST00000489443 KATNBL1Q9H079 304 aa18.23■□□□□ 0.51
LMX1A-204ENST00000489443 CYP46A1Q9Y6A2 500 aa18.23■□□□□ 0.51
LMX1A-204ENST00000489443 hCG_1642624A0A1W2PR95 340 aa18.22■□□□□ 0.51
LMX1A-204ENST00000489443 GOLGA8AA7E2F4 631 aa18.22■□□□□ 0.51
LMX1A-204ENST00000489443 GOLGA8BA8MQT2 603 aa18.22■□□□□ 0.51
LMX1A-204ENST00000489443 KBTBD13C9JR72 458 aa18.22■□□□□ 0.51
LMX1A-204ENST00000489443 OPLAHO14841 1288 aa18.22■□□□□ 0.51
LMX1A-204ENST00000489443 PGK1P00558 417 aa18.22■□□□□ 0.51
LMX1A-204ENST00000489443 PDE4DQ08499 809 aa18.22■□□□□ 0.51
LMX1A-204ENST00000489443 NOL8Q76FK4 1167 aaKnown RBP18.22■□□□□ 0.51
LMX1A-204ENST00000489443 FBXO16Q8IX29 292 aaPredicted RBP18.22■□□□□ 0.51
LMX1A-204ENST00000489443 DNERQ8NFT8 737 aa18.22■□□□□ 0.51
LMX1A-204ENST00000489443 MORC4Q8TE76 937 aa18.22■□□□□ 0.51
LMX1A-204ENST00000489443 MPHOSPH6Q99547 160 aaKnown RBP18.22■□□□□ 0.51
LMX1A-204ENST00000489443 MAF1Q9H063 256 aa18.22■□□□□ 0.51
LMX1A-204ENST00000489443 ZSWIM6Q9HCJ5 1215 aa18.22■□□□□ 0.51
LMX1A-204ENST00000489443 RBM28Q9NW13 759 aaKnown RBP18.22■□□□□ 0.51
LMX1A-204ENST00000489443 LOC102724159A0A0B4J2E5 919 aa18.21■□□□□ 0.51
LMX1A-204ENST00000489443 B4DLN1 442 aa18.21■□□□□ 0.51
LMX1A-204ENST00000489443 DNM1LO00429 736 aa18.21■□□□□ 0.51
LMX1A-204ENST00000489443 EIF5BO60841 1220 aaKnown RBP18.21■□□□□ 0.51
LMX1A-204ENST00000489443 MRPL12P52815 198 aaKnown RBP18.21■□□□□ 0.51
LMX1A-204ENST00000489443 TNFAIP2Q03169 654 aa18.21■□□□□ 0.51
LMX1A-204ENST00000489443 PWP2Q15269 919 aaKnown RBP18.21■□□□□ 0.51
LMX1A-204ENST00000489443 LRRC41Q15345 812 aa18.21■□□□□ 0.51
LMX1A-204ENST00000489443 RMDN3Q96TC7 470 aa18.21■□□□□ 0.51
LMX1A-204ENST00000489443 UPF3BQ9BZI7 483 aaKnown RBP18.21■□□□□ 0.51
LMX1A-204ENST00000489443 TM6SF1Q9BZW5 370 aa18.21■□□□□ 0.51
LMX1A-204ENST00000489443 SENP6Q9GZR1 1112 aaPredicted RBP18.21■□□□□ 0.51
LMX1A-204ENST00000489443 PDGFCQ9NRA1 345 aa18.21■□□□□ 0.51
LMX1A-204ENST00000489443 COL20A1Q9P218 1284 aa18.21■□□□□ 0.51
LMX1A-204ENST00000489443 ADCY6O43306 1168 aa18.2■□□□□ 0.5
LMX1A-204ENST00000489443 DUSP11O75319 330 aaKnown RBP18.2■□□□□ 0.5
LMX1A-204ENST00000489443 SEC24BO95487 1268 aa18.2■□□□□ 0.5
LMX1A-204ENST00000489443 COL6A1P12109 1028 aa18.2■□□□□ 0.5
LMX1A-204ENST00000489443 HOXA13P31271 388 aaPredicted RBP18.2■□□□□ 0.5
LMX1A-204ENST00000489443 ADCYAP1R1P41586 468 aa18.2■□□□□ 0.5
LMX1A-204ENST00000489443 HSD17B4P51659 736 aa18.2■□□□□ 0.5
LMX1A-204ENST00000489443 RNF180Q86T96 592 aa18.2■□□□□ 0.5
LMX1A-204ENST00000489443 NSUN6Q8TEA1 469 aaKnown RBP18.2■□□□□ 0.5
LMX1A-204ENST00000489443 VTA1Q9NP79 307 aa18.2■□□□□ 0.5
LMX1A-204ENST00000489443 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.19■□□□□ 0.5
LMX1A-204ENST00000489443 LRRC37A2A6NM11 1700 aa18.19■□□□□ 0.5
LMX1A-204ENST00000489443 GCOM1H8Y6P7 765 aaPredicted RBP18.19■□□□□ 0.5
LMX1A-204ENST00000489443 POLR2MP0CAP2 368 aa18.19■□□□□ 0.5
LMX1A-204ENST00000489443 CDC27P30260 824 aa18.19■□□□□ 0.5
LMX1A-204ENST00000489443 ADD1P35611 737 aaKnown RBP18.19■□□□□ 0.5
LMX1A-204ENST00000489443 METAP2P50579 478 aaKnown RBP eCLIP18.19■□□□□ 0.5
LMX1A-204ENST00000489443 ARHGEF16Q5VV41 709 aa18.19■□□□□ 0.5
LMX1A-204ENST00000489443 IQSEC1Q6DN90 963 aa18.19■□□□□ 0.5
LMX1A-204ENST00000489443 TAPT1Q6NXT6 567 aa18.19■□□□□ 0.5
LMX1A-204ENST00000489443 FBXL16Q8N461 479 aa18.19■□□□□ 0.5
LMX1A-204ENST00000489443 AGXT2Q9BYV1 514 aa18.19■□□□□ 0.5
LMX1A-204ENST00000489443 FAM217BQ9NTX9 383 aaPredicted RBP18.19■□□□□ 0.5
LMX1A-204ENST00000489443 SYNRGQ9UMZ2 1314 aa18.19■□□□□ 0.5
LMX1A-204ENST00000489443 EVI5O60447 810 aa18.18■□□□□ 0.5
LMX1A-204ENST00000489443 C6orf222P0C671 652 aaPredicted RBP18.18■□□□□ 0.5
LMX1A-204ENST00000489443 EIF2AK2P19525 551 aaKnown RBP18.18■□□□□ 0.5
LMX1A-204ENST00000489443 EDNRBP24530 442 aa18.18■□□□□ 0.5
LMX1A-204ENST00000489443 RCAN1P53805 252 aa18.18■□□□□ 0.5
LMX1A-204ENST00000489443 FCHSD1Q86WN1 690 aa18.18■□□□□ 0.5
LMX1A-204ENST00000489443 SAMD3Q8N6K7 520 aa18.18■□□□□ 0.5
LMX1A-204ENST00000489443 FERMT2Q96AC1 680 aa18.18■□□□□ 0.5
LMX1A-204ENST00000489443 SPC25Q9HBM1 224 aa18.18■□□□□ 0.5
LMX1A-204ENST00000489443 MAP3K20Q9NYL2 800 aaKnown RBP18.18■□□□□ 0.5
LMX1A-204ENST00000489443 V9GY48 417 aaPredicted RBP18.18■□□□□ 0.5
LMX1A-204ENST00000489443 ALPK3Q96L96 1907 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 CCDC196A0A1B0GTZ2 297 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms