RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 VTA1Q9NP79 307 aa29.13■■■□□ 2.25
HMGN1-217ENST00000489072 GNEQ9Y223 722 aaKnown RBP29.13■■■□□ 2.25
HMGN1-217ENST00000489072 SZT2Q5T011 3432 aa29.13■■■□□ 2.25
HMGN1-217ENST00000489072 SMPD1P17405 629 aa29.12■■■□□ 2.25
HMGN1-217ENST00000489072 TROAPQ12815 778 aa29.12■■■□□ 2.25
HMGN1-217ENST00000489072 TMEM63BQ5T3F8 832 aa29.12■■■□□ 2.25
HMGN1-217ENST00000489072 CREB3L3Q68CJ9 461 aa29.12■■■□□ 2.25
HMGN1-217ENST00000489072 FBXO11Q86XK2 927 aa29.12■■■□□ 2.25
HMGN1-217ENST00000489072 MTMR8Q96EF0 704 aa29.12■■■□□ 2.25
HMGN1-217ENST00000489072 GPHNQ9NQX3 736 aaPredicted RBP29.12■■■□□ 2.25
HMGN1-217ENST00000489072 LOC102724159A0A0B4J2E5 919 aa29.11■■■□□ 2.25
HMGN1-217ENST00000489072 A0A1W2PPC1 479 aa29.11■■■□□ 2.25
HMGN1-217ENST00000489072 MOXD2PA6NHM9 499 aa29.11■■■□□ 2.25
HMGN1-217ENST00000489072 NKX3-2P78367 333 aa29.11■■■□□ 2.25
HMGN1-217ENST00000489072 PWP2Q15269 919 aaKnown RBP29.11■■■□□ 2.25
HMGN1-217ENST00000489072 SPC25Q9HBM1 224 aa29.11■■■□□ 2.25
HMGN1-217ENST00000489072 PPP1R11O60927 126 aaPredicted RBP29.1■■■□□ 2.25
HMGN1-217ENST00000489072 MDM2Q00987 491 aaPredicted RBP29.1■■■□□ 2.25
HMGN1-217ENST00000489072 IQSEC1Q6DN90 963 aa29.1■■■□□ 2.25
HMGN1-217ENST00000489072 NOL8Q76FK4 1167 aaKnown RBP29.1■■■□□ 2.25
HMGN1-217ENST00000489072 LY9Q9HBG7 655 aa29.1■■■□□ 2.25
HMGN1-217ENST00000489072 PRC1O43663 620 aa29.09■■■□□ 2.25
HMGN1-217ENST00000489072 ASGR1P07306 291 aa29.09■■■□□ 2.25
HMGN1-217ENST00000489072 EDNRBP24530 442 aa29.09■■■□□ 2.25
HMGN1-217ENST00000489072 BEX3Q00994 111 aa29.09■■■□□ 2.25
HMGN1-217ENST00000489072 TLE2Q04725 743 aa29.09■■■□□ 2.25
HMGN1-217ENST00000489072 GNASQ5JWF2 1037 aa29.09■■■□□ 2.25
HMGN1-217ENST00000489072 TLK2Q86UE8 772 aa29.09■■■□□ 2.25
HMGN1-217ENST00000489072 PCSK9Q8NBP7 692 aaKnown RBP29.09■■■□□ 2.25
HMGN1-217ENST00000489072 DNERQ8NFT8 737 aa29.09■■■□□ 2.25
HMGN1-217ENST00000489072 STARD7Q9NQZ5 370 aa29.09■■■□□ 2.25
HMGN1-217ENST00000489072 PDLIM7Q9NR12 457 aa29.09■■■□□ 2.25
HMGN1-217ENST00000489072 CDC45O75419 566 aa29.08■■■□□ 2.25
HMGN1-217ENST00000489072 SH3RF1Q7Z6J0 888 aa29.08■■■□□ 2.25
HMGN1-217ENST00000489072 NUP133Q8WUM0 1156 aa29.08■■■□□ 2.25
HMGN1-217ENST00000489072 RIOX1Q9H6W3 641 aa29.08■■■□□ 2.25
HMGN1-217ENST00000489072 COL20A1Q9P218 1284 aa29.08■■■□□ 2.25
HMGN1-217ENST00000489072 MRPL11Q9Y3B7 192 aaKnown RBP29.08■■■□□ 2.25
HMGN1-217ENST00000489072 OPLAHO14841 1288 aa29.07■■■□□ 2.24
HMGN1-217ENST00000489072 ZBTB5O15062 677 aa29.07■■■□□ 2.24
HMGN1-217ENST00000489072 CYTH3O43739 400 aa29.07■■■□□ 2.24
HMGN1-217ENST00000489072 CATIPQ7Z7H3 387 aa29.07■■■□□ 2.24
HMGN1-217ENST00000489072 SYTL5Q8TDW5 730 aaPredicted RBP29.07■■■□□ 2.24
HMGN1-217ENST00000489072 AMNQ9BXJ7 453 aa29.07■■■□□ 2.24
HMGN1-217ENST00000489072 UBE2OQ9C0C9 1292 aaKnown RBP29.07■■■□□ 2.24
HMGN1-217ENST00000489072 MAF1Q9H063 256 aa29.07■■■□□ 2.24
HMGN1-217ENST00000489072 PRDM5Q9NQX1 630 aaPredicted RBP29.07■■■□□ 2.24
HMGN1-217ENST00000489072 PRKAG2Q9UGJ0 569 aa29.07■■■□□ 2.24
HMGN1-217ENST00000489072 RBM47A0AV96 593 aaKnown RBP29.06■■■□□ 2.24
HMGN1-217ENST00000489072 DYNC1LI2O43237 492 aaPredicted RBP29.06■■■□□ 2.24
HMGN1-217ENST00000489072 MCM5P33992 734 aa29.06■■■□□ 2.24
HMGN1-217ENST00000489072 PDE4DQ08499 809 aa29.06■■■□□ 2.24
HMGN1-217ENST00000489072 CASC1Q6TDU7 716 aa29.06■■■□□ 2.24
HMGN1-217ENST00000489072 MTA3Q9BTC8 594 aa29.06■■■□□ 2.24
HMGN1-217ENST00000489072 ELP1O95163 1332 aa29.05■■■□□ 2.24
HMGN1-217ENST00000489072 TRIM43BA6NCK2 446 aa29.05■■■□□ 2.24
HMGN1-217ENST00000489072 SH2B2O14492 632 aaPredicted RBP29.05■■■□□ 2.24
HMGN1-217ENST00000489072 PQBP1O60828 265 aaKnown RBP29.05■■■□□ 2.24
HMGN1-217ENST00000489072 DUSP28Q4G0W2 176 aa29.05■■■□□ 2.24
HMGN1-217ENST00000489072 MCF2L2Q86YR7 1114 aa29.05■■■□□ 2.24
HMGN1-217ENST00000489072 ZNF654Q8IZM8 581 aa29.05■■■□□ 2.24
HMGN1-217ENST00000489072 TRIM43Q96BQ3 446 aaPredicted RBP29.05■■■□□ 2.24
HMGN1-217ENST00000489072 GLT1D1Q96MS3 346 aa29.05■■■□□ 2.24
HMGN1-217ENST00000489072 TAAR1Q96RJ0 339 aa29.05■■■□□ 2.24
HMGN1-217ENST00000489072 PIGSQ96S52 555 aa29.05■■■□□ 2.24
HMGN1-217ENST00000489072 MYL10Q9BUA6 226 aa29.05■■■□□ 2.24
HMGN1-217ENST00000489072 AP5M1Q9H0R1 490 aa29.05■■■□□ 2.24
HMGN1-217ENST00000489072 FSCN1Q16658 493 aaKnown RBP29.04■■■□□ 2.24
HMGN1-217ENST00000489072 HOMER1Q86YM7 354 aa29.04■■■□□ 2.24
HMGN1-217ENST00000489072 WDR11Q9BZH6 1224 aa29.04■■■□□ 2.24
HMGN1-217ENST00000489072 Q9Y3F1 56 aa29.04■■■□□ 2.24
HMGN1-217ENST00000489072 SOX1O00570 391 aaPredicted RBP29.03■■■□□ 2.24
HMGN1-217ENST00000489072 ANKRD33Q7Z3H0 272 aa29.03■■■□□ 2.24
HMGN1-217ENST00000489072 TMEM87BQ96K49 555 aa29.03■■■□□ 2.24
HMGN1-217ENST00000489072 MPHOSPH6Q99547 160 aaKnown RBP29.03■■■□□ 2.24
HMGN1-217ENST00000489072 LBHD1Q9BQE6 289 aaPredicted RBP29.03■■■□□ 2.24
HMGN1-217ENST00000489072 PCDHA1Q9Y5I3 950 aa29.03■■■□□ 2.24
HMGN1-217ENST00000489072 DDAH1O94760 285 aa29.02■■■□□ 2.24
HMGN1-217ENST00000489072 NEFLP07196 543 aa29.02■■■□□ 2.24
HMGN1-217ENST00000489072 CLTBP09497 229 aa29.02■■■□□ 2.24
HMGN1-217ENST00000489072 CXCL17Q6UXB2 119 aa29.02■■■□□ 2.24
HMGN1-217ENST00000489072 TDHQ8IZJ6 230 aa29.02■■■□□ 2.24
HMGN1-217ENST00000489072 MAP3K14Q99558 947 aa29.02■■■□□ 2.24
HMGN1-217ENST00000489072 LRRC2Q9BYS8 371 aa29.02■■■□□ 2.24
HMGN1-217ENST00000489072 KIAA1217Q5T5P2 1943 aa29.02■■■□□ 2.24
HMGN1-217ENST00000489072 CFBP00751 764 aa29.01■■■□□ 2.23
HMGN1-217ENST00000489072 CDK7P50613 346 aa29.01■■■□□ 2.23
HMGN1-217ENST00000489072 HSD17B4P51659 736 aa29.01■■■□□ 2.23
HMGN1-217ENST00000489072 GHRHRQ02643 423 aa29.01■■■□□ 2.23
HMGN1-217ENST00000489072 NSUN6Q8TEA1 469 aaKnown RBP29.01■■■□□ 2.23
HMGN1-217ENST00000489072 VTI1AQ96AJ9 217 aa29.01■■■□□ 2.23
HMGN1-217ENST00000489072 TOX2Q96NM4 488 aa29.01■■■□□ 2.23
HMGN1-217ENST00000489072 RMDN3Q96TC7 470 aa29.01■■■□□ 2.23
HMGN1-217ENST00000489072 A0A0U1RQG5 324 aaPredicted RBP29■■■□□ 2.23
HMGN1-217ENST00000489072 B4DLN1 442 aa29■■■□□ 2.23
HMGN1-217ENST00000489072 ITGB8P26012 769 aa29■■■□□ 2.23
HMGN1-217ENST00000489072 MRPL12P52815 198 aaKnown RBP29■■■□□ 2.23
HMGN1-217ENST00000489072 FAAP100Q0VG06 881 aa29■■■□□ 2.23
HMGN1-217ENST00000489072 RNF20Q5VTR2 975 aa29■■■□□ 2.23
HMGN1-217ENST00000489072 NFXL1Q6ZNB6 911 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms