RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 PBXIP1Q96AQ6 731 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 ZNF396Q96N95 335 aaPredicted RBP7.73□□□□□ -1.17
PDCD4-209ENST00000489049 TRAIPQ9BWF2 469 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 PUS7LQ9H0K6 701 aaKnown RBP7.73□□□□□ -1.17
PDCD4-209ENST00000489049 GZF1Q9H116 711 aaPredicted RBP7.73□□□□□ -1.17
PDCD4-209ENST00000489049 SEC31BQ9NQW1 1179 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 ANAPC4Q9UJX5 808 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 MYH7P12883 1935 aa7.73□□□□□ -1.17
PDCD4-209ENST00000489049 COL24A1Q17RW2 1714 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 CCDC196A0A1B0GTZ2 297 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 PRC1O43663 620 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 XYLBO75191 536 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 BBOX1O75936 387 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 ATG7O95352 703 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 LARGE1O95461 756 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 CAVIN2O95810 425 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 APPP05067 770 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 SLC3A2P08195 630 aaKnown RBP7.72□□□□□ -1.17
PDCD4-209ENST00000489049 XRCC6P12956 609 aaKnown RBP eCLIP7.72□□□□□ -1.17
PDCD4-209ENST00000489049 CPA1P15085 419 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 HIBADHP31937 336 aaKnown RBP7.72□□□□□ -1.17
PDCD4-209ENST00000489049 GSTO1P78417 241 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 ELOAQ14241 798 aaKnown RBP7.72□□□□□ -1.17
PDCD4-209ENST00000489049 UVSSAQ2YD98 709 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 ZSCAN23Q3MJ62 389 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 CCDC183Q5T5S1 534 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 ZNF772Q68DY9 489 aaPredicted RBP7.72□□□□□ -1.17
PDCD4-209ENST00000489049 LRSAM1Q6UWE0 723 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 SYNE3Q6ZMZ3 975 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 STOX1Q6ZVD7 989 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 RGL4Q8IZJ4 473 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 CMTR1Q8N1G2 835 aaKnown RBP7.72□□□□□ -1.17
PDCD4-209ENST00000489049 MAGEB6Q8N7X4 407 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 NECAB1Q8N987 351 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 WDR66Q8TBY9 1149 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 WASF1Q92558 559 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 MEGF10Q96KG7 1140 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 PRIMPOLQ96LW4 560 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 BRIP1Q9BX63 1249 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 NAPBQ9H115 298 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 ANGEL1Q9UNK9 670 aaKnown RBP7.72□□□□□ -1.17
PDCD4-209ENST00000489049 SALL1Q9NSC2 1324 aa7.72□□□□□ -1.17
PDCD4-209ENST00000489049 ERICH2A1L162 156 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 VPS37CA5D8V6 355 aaPredicted RBP7.71□□□□□ -1.18
PDCD4-209ENST00000489049 GOLGA6L4A6NEF3 574 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 FAM177BA6PVY3 158 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 DLL1O00548 723 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 CPLX1O14810 134 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 NPHP1O15259 732 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 FOXP2O15409 715 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 LDHCP07864 332 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 HOXA10P31260 410 aaPredicted RBP7.71□□□□□ -1.18
PDCD4-209ENST00000489049 ST5P78524 1137 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 GRAPQ13588 217 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 HS1BP3Q53T59 392 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 CCDC178Q5BJE1 867 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 COX20Q5RI15 118 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 AKNAD1Q5T1N1 836 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 CAVIN1Q6NZI2 390 aaKnown RBP7.71□□□□□ -1.18
PDCD4-209ENST00000489049 MFSD6Q6ZSS7 791 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 KRT27Q7Z3Y8 459 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 BRAPQ7Z569 592 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 IFNL3Q8IZI9 196 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 CNBD1Q8NA66 436 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 NSUN7Q8NE18 718 aaKnown RBP7.71□□□□□ -1.18
PDCD4-209ENST00000489049 GRAPLQ8TC17 118 aaPredicted RBP7.71□□□□□ -1.18
PDCD4-209ENST00000489049 GPT2Q8TD30 523 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 STAG1Q8WVM7 1258 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 PLD4Q96BZ4 506 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 FAM84BQ96KN1 310 aaPredicted RBP7.71□□□□□ -1.18
PDCD4-209ENST00000489049 ATP8A2Q9NTI2 1148 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 KCNMB2Q9Y691 235 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 XDHP47989 1333 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 NID2Q14112 1375 aa7.71□□□□□ -1.18
PDCD4-209ENST00000489049 KLRG2A4D1S0 409 aaPredicted RBP7.7□□□□□ -1.18
PDCD4-209ENST00000489049 J3QW42 95 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 PLSCR1O15162 318 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 HYAL3O43820 417 aaPredicted RBP7.7□□□□□ -1.18
PDCD4-209ENST00000489049 PRMT3O60678 531 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 MMP20O60882 483 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 MBD4O95243 580 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 PSAPP07602 524 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 HOXD8P13378 290 aaPredicted RBP7.7□□□□□ -1.18
PDCD4-209ENST00000489049 YY1P25490 414 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 RBM6P78332 1123 aaKnown RBP7.7□□□□□ -1.18
PDCD4-209ENST00000489049 CCDC173Q0VFZ6 552 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 ST3GAL1Q11201 340 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 SCRN1Q12765 414 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 CRY2Q49AN0 593 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 TMEM164Q5U3C3 297 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 ZNF804AQ7Z570 1209 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 FAM177A1Q8N128 213 aaPredicted RBP7.7□□□□□ -1.18
PDCD4-209ENST00000489049 NLGN1Q8N2Q7 840 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 RBM17Q96I25 401 aaKnown RBP7.7□□□□□ -1.18
PDCD4-209ENST00000489049 CRAMP1Q96RY5 1269 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 CRNKL1Q9BZJ0 848 aaKnown RBP7.7□□□□□ -1.18
PDCD4-209ENST00000489049 DDX19AQ9NUU7 478 aaKnown RBP7.7□□□□□ -1.18
PDCD4-209ENST00000489049 WWC3Q9ULE0 1092 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 TAF6LQ9Y6J9 622 aa7.7□□□□□ -1.18
PDCD4-209ENST00000489049 DOCK2Q92608 1830 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms