RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 RNF180Q86T96 592 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 ZNF575Q86XF7 245 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 SPPL2CQ8IUH8 684 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 OR6P1Q8NGX9 317 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 PANK1Q8TE04 598 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 FBXO41Q8TF61 875 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 NINJ1Q92982 152 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 MFSD3Q96ES6 412 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 CAAP1Q9H8G2 361 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 YBX2Q9Y2T7 364 aaKnown RBP4.42□□□□□ -1.7
PRPF4-203ENST00000488937 CSADQ9Y600 493 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 ROBO2Q9HCK4 1378 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 SHTN1A0MZ66 631 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 F6X3S4 739 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 DIAPH1O60610 1272 aaKnown RBP4.41□□□□□ -1.7
PRPF4-203ENST00000488937 CILPO75339 1184 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 ESR1P03372 595 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 KRT18P05783 430 aaKnown RBP4.41□□□□□ -1.7
PRPF4-203ENST00000488937 BDNFP23560 247 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 CASP7P55210 303 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 LMNB2Q03252 620 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 CHRNEQ04844 493 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 PTPN11Q06124 597 aaPredicted RBP4.41□□□□□ -1.7
PRPF4-203ENST00000488937 APOBRQ0VD83 1088 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 SAFB2Q14151 953 aaKnown RBP eCLIP4.41□□□□□ -1.7
PRPF4-203ENST00000488937 MTERF2Q49AM1 385 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 LETMD1Q6P1Q0 360 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 CCDC81Q6ZN84 652 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 FAM196AQ6ZSG2 479 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 UBE3DQ7Z6J8 389 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 PCGF5Q86SE9 256 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 C12orf40Q86WS4 652 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 CREG2Q8IUH2 290 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 NIM1KQ8IY84 436 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 ST13P5Q8NFI4 369 aaPredicted RBP4.41□□□□□ -1.7
PRPF4-203ENST00000488937 SVIPQ8NHG7 77 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 NKD1Q969G9 470 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 MPHOSPH6Q99547 160 aaKnown RBP4.41□□□□□ -1.7
PRPF4-203ENST00000488937 ASPSCR1Q9BZE9 553 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 ADAMTS10Q9H324 1103 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 CASS4Q9NQ75 786 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 ST7Q9NRC1 585 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 SFMBT1Q9UHJ3 866 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 MCM8Q9UJA3 840 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 PPT2Q9UMR5 302 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 KDM2BQ8NHM5 1336 aa4.41□□□□□ -1.7
PRPF4-203ENST00000488937 HRKO00198 91 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 RFPL3O75679 317 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 GJB6O95452 261 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 BPNT1O95861 308 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 PF4P02776 101 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 TFE3P19532 575 aaPredicted RBP4.4□□□□□ -1.71
PRPF4-203ENST00000488937 CNGA1P29973 690 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 EIF6P56537 245 aaKnown RBP4.4□□□□□ -1.71
PRPF4-203ENST00000488937 KRTAP10-9P60411 292 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 POU5F1BQ06416 359 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 CAMK2GQ13555 558 aaPredicted RBP4.4□□□□□ -1.71
PRPF4-203ENST00000488937 FXNQ16595 210 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 LONRF2Q1L5Z9 754 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 OLFML2BQ68BL8 750 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 SPATC1Q76KD6 591 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 AFAP1L2Q8N4X5 818 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 RBBP8NLQ8NC74 664 aaPredicted RBP4.4□□□□□ -1.71
PRPF4-203ENST00000488937 ARPC5LQ9BPX5 153 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 SGPP1Q9BX95 441 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 ZMYM5Q9UJ78 669 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 PCDHB5Q9Y5E4 795 aa4.4□□□□□ -1.71
PRPF4-203ENST00000488937 GSG1L2A8MUP6 293 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 AKAP10O43572 662 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 RASGRP1O95267 797 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 EYA4O95677 639 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 TRHRP34981 398 aaPredicted RBP4.39□□□□□ -1.71
PRPF4-203ENST00000488937 SOX5P35711 763 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 ETV3P41162 512 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 NEK2P51955 445 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 FAM160A1Q05DH4 1040 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 TNK2Q07912 1038 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 DUSP4Q13115 394 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 NXNQ6DKJ4 435 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 KRBA2Q6ZNG9 492 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 C14orf80Q86SX3 495 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 CCDC84Q86UT8 332 aaPredicted RBP4.39□□□□□ -1.71
PRPF4-203ENST00000488937 MYO1HQ8N1T3 1032 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 Q8N1X5 172 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 GOLM1Q8NBJ4 401 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 ZSWIM2Q8NEG5 633 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 TTC8Q8TAM2 541 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 PPP1R13LQ8WUF5 828 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 CAMKK2Q96RR4 588 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 CDH19Q9H159 772 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 GPATCH2Q9NW75 528 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 SWAP70Q9UH65 585 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 ZNRF3Q9ULT6 936 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 PCDHA4Q9UN74 947 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 TLR6Q9Y2C9 796 aa4.39□□□□□ -1.71
PRPF4-203ENST00000488937 OR14I1A6ND48 311 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 GFRA2O00451 464 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 EXOC5O00471 708 aa4.38□□□□□ -1.71
PRPF4-203ENST00000488937 PDE8AO60658 829 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms