RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 SUSD5O60279 629 aa7.68□□□□□ -1.18
PTPN4-212ENST00000488896 GJB6O95452 261 aa7.68□□□□□ -1.18
PTPN4-212ENST00000488896 ITGAVP06756 1048 aa7.68□□□□□ -1.18
PTPN4-212ENST00000488896 ZSCAN22P10073 491 aaPredicted RBP7.68□□□□□ -1.18
PTPN4-212ENST00000488896 CDR1P51861 262 aa7.68□□□□□ -1.18
PTPN4-212ENST00000488896 TMEM62Q0P6H9 643 aa7.68□□□□□ -1.18
PTPN4-212ENST00000488896 SSPNQ14714 243 aa7.68□□□□□ -1.18
PTPN4-212ENST00000488896 PLEKHN1Q494U1 663 aaPredicted RBP7.68□□□□□ -1.18
PTPN4-212ENST00000488896 ANKS3Q6ZW76 656 aa7.68□□□□□ -1.18
PTPN4-212ENST00000488896 BTN2A2Q8WVV5 523 aa7.68□□□□□ -1.18
PTPN4-212ENST00000488896 DBR1Q9UK59 544 aaKnown RBP7.68□□□□□ -1.18
PTPN4-212ENST00000488896 KCTD3Q9Y597 815 aa7.68□□□□□ -1.18
PTPN4-212ENST00000488896 ZC3H12DA2A288 527 aaKnown RBP7.67□□□□□ -1.18
PTPN4-212ENST00000488896 F8W031 263 aaPredicted RBP7.67□□□□□ -1.18
PTPN4-212ENST00000488896 THBDP07204 575 aa7.67□□□□□ -1.18
PTPN4-212ENST00000488896 DBHP09172 617 aa7.67□□□□□ -1.18
PTPN4-212ENST00000488896 ZNF200P98182 395 aaPredicted RBP7.67□□□□□ -1.18
PTPN4-212ENST00000488896 ZC3H14Q6PJT7 736 aaKnown RBP7.67□□□□□ -1.18
PTPN4-212ENST00000488896 PAQR3Q6TCH7 311 aa7.67□□□□□ -1.18
PTPN4-212ENST00000488896 LCNL1Q6ZST4 164 aa7.67□□□□□ -1.18
PTPN4-212ENST00000488896 LZTR1Q8N653 840 aa7.67□□□□□ -1.18
PTPN4-212ENST00000488896 CELF2-AS1Q8N7Q2 184 aa7.67□□□□□ -1.18
PTPN4-212ENST00000488896 SLC43A3Q8NBI5 491 aa7.67□□□□□ -1.18
PTPN4-212ENST00000488896 USP33Q8TEY7 942 aa7.67□□□□□ -1.18
PTPN4-212ENST00000488896 MRGPRX3Q96LB0 322 aa7.67□□□□□ -1.18
PTPN4-212ENST00000488896 BTG4Q9NY30 223 aa7.67□□□□□ -1.18
PTPN4-212ENST00000488896 FBLN5Q9UBX5 448 aa7.67□□□□□ -1.18
PTPN4-212ENST00000488896 IRAK3Q9Y616 596 aa7.67□□□□□ -1.18
PTPN4-212ENST00000488896 N4BP3O15049 544 aa7.66□□□□□ -1.18
PTPN4-212ENST00000488896 PPP1R11O60927 126 aaPredicted RBP7.66□□□□□ -1.18
PTPN4-212ENST00000488896 CYBBP04839 570 aa7.66□□□□□ -1.18
PTPN4-212ENST00000488896 PI3P19957 117 aa7.66□□□□□ -1.18
PTPN4-212ENST00000488896 ECI1P42126 302 aa7.66□□□□□ -1.18
PTPN4-212ENST00000488896 CORO7P57737 925 aa7.66□□□□□ -1.18
PTPN4-212ENST00000488896 CBX2Q14781 532 aaPredicted RBP7.66□□□□□ -1.18
PTPN4-212ENST00000488896 NR1I3Q14994 352 aa7.66□□□□□ -1.18
PTPN4-212ENST00000488896 LDHDQ86WU2 507 aa7.66□□□□□ -1.18
PTPN4-212ENST00000488896 ZNF227Q86WZ6 799 aa7.66□□□□□ -1.18
PTPN4-212ENST00000488896 PANK1Q8TE04 598 aa7.66□□□□□ -1.18
PTPN4-212ENST00000488896 MZB1Q8WU39 189 aa7.66□□□□□ -1.18
PTPN4-212ENST00000488896 SIGLEC10Q96LC7 697 aa7.66□□□□□ -1.18
PTPN4-212ENST00000488896 NKX2-4Q9H2Z4 354 aa7.66□□□□□ -1.18
PTPN4-212ENST00000488896 C7orf72A4D263 438 aa7.65□□□□□ -1.18
PTPN4-212ENST00000488896 NPHS1O60500 1241 aa7.65□□□□□ -1.18
PTPN4-212ENST00000488896 SNRPB2P08579 225 aaKnown RBP7.65□□□□□ -1.18
PTPN4-212ENST00000488896 KCNJ6P48051 423 aa7.65□□□□□ -1.18
PTPN4-212ENST00000488896 MAPKAPK2P49137 400 aa7.65□□□□□ -1.18
PTPN4-212ENST00000488896 MBLAC2Q68D91 279 aa7.65□□□□□ -1.18
PTPN4-212ENST00000488896 SPOCD1Q6ZMY3 1216 aa7.65□□□□□ -1.18
PTPN4-212ENST00000488896 EEPD1Q7L9B9 569 aa7.65□□□□□ -1.18
PTPN4-212ENST00000488896 CABP7Q86V35 215 aa7.65□□□□□ -1.18
PTPN4-212ENST00000488896 NLGN2Q8NFZ4 835 aa7.65□□□□□ -1.18
PTPN4-212ENST00000488896 COPS5Q92905 334 aa7.65□□□□□ -1.18
PTPN4-212ENST00000488896 GMLQ99445 158 aa7.65□□□□□ -1.18
PTPN4-212ENST00000488896 CYP26B1Q9NR63 512 aa7.65□□□□□ -1.18
PTPN4-212ENST00000488896 TRBV23OR9-2A0A075B6M9 112 aa7.64□□□□□ -1.19
PTPN4-212ENST00000488896 RFXAPO00287 272 aa7.64□□□□□ -1.19
PTPN4-212ENST00000488896 FUCA1P04066 466 aa7.64□□□□□ -1.19
PTPN4-212ENST00000488896 PRR5P85299 388 aa7.64□□□□□ -1.19
PTPN4-212ENST00000488896 SF1Q15637 639 aaKnown RBP7.64□□□□□ -1.19
PTPN4-212ENST00000488896 PRSS53Q2L4Q9 553 aa7.64□□□□□ -1.19
PTPN4-212ENST00000488896 ZNF385BQ569K4 471 aa7.64□□□□□ -1.19
PTPN4-212ENST00000488896 NAALADL2Q58DX5 795 aa7.64□□□□□ -1.19
PTPN4-212ENST00000488896 BCAS3Q9H6U6 928 aa7.64□□□□□ -1.19
PTPN4-212ENST00000488896 PPP1R1BQ9UD71 204 aaPredicted RBP7.64□□□□□ -1.19
PTPN4-212ENST00000488896 PLA2G2DQ9UNK4 145 aa7.64□□□□□ -1.19
PTPN4-212ENST00000488896 SRGAP3O43295 1099 aa7.63□□□□□ -1.19
PTPN4-212ENST00000488896 ZC3H6P61129 1189 aaKnown RBP7.63□□□□□ -1.19
PTPN4-212ENST00000488896 INF2Q27J81 1249 aa7.63□□□□□ -1.19
PTPN4-212ENST00000488896 IGDCC3Q8IVU1 814 aa7.63□□□□□ -1.19
PTPN4-212ENST00000488896 FRS2Q8WU20 508 aa7.63□□□□□ -1.19
PTPN4-212ENST00000488896 MARCH2Q9P0N8 246 aa7.63□□□□□ -1.19
PTPN4-212ENST00000488896 BUB1BO60566 1050 aaPredicted RBP7.62□□□□□ -1.19
PTPN4-212ENST00000488896 GLI4P10075 376 aa7.62□□□□□ -1.19
PTPN4-212ENST00000488896 CYP4F3Q08477 520 aa7.62□□□□□ -1.19
PTPN4-212ENST00000488896 DDR2Q16832 855 aa7.62□□□□□ -1.19
PTPN4-212ENST00000488896 MTA3Q9BTC8 594 aa7.62□□□□□ -1.19
PTPN4-212ENST00000488896 PCDHA5Q9Y5H7 936 aa7.62□□□□□ -1.19
PTPN4-212ENST00000488896 HOXC12P31275 282 aa7.61□□□□□ -1.19
PTPN4-212ENST00000488896 SLC10A6Q3KNW5 377 aa7.61□□□□□ -1.19
PTPN4-212ENST00000488896 KRTAP19-4Q3LI73 84 aa7.61□□□□□ -1.19
PTPN4-212ENST00000488896 TEX2Q8IWB9 1127 aa7.61□□□□□ -1.19
PTPN4-212ENST00000488896 DPF3Q92784 378 aa7.61□□□□□ -1.19
PTPN4-212ENST00000488896 MMP19Q99542 508 aa7.61□□□□□ -1.19
PTPN4-212ENST00000488896 TMEFF2Q9UIK5 374 aaPredicted RBP7.61□□□□□ -1.19
PTPN4-212ENST00000488896 SIT1Q9Y3P8 196 aa7.61□□□□□ -1.19
PTPN4-212ENST00000488896 AGRPO00253 132 aa7.6□□□□□ -1.19
PTPN4-212ENST00000488896 KLF4O43474 513 aa7.6□□□□□ -1.19
PTPN4-212ENST00000488896 STK10O94804 968 aaKnown RBP7.6□□□□□ -1.19
PTPN4-212ENST00000488896 NTRK1P04629 796 aa7.6□□□□□ -1.19
PTPN4-212ENST00000488896 LIMS1P48059 325 aa7.6□□□□□ -1.19
PTPN4-212ENST00000488896 VMACQ2NL98 169 aa7.6□□□□□ -1.19
PTPN4-212ENST00000488896 FBLN7Q53RD9 439 aa7.6□□□□□ -1.19
PTPN4-212ENST00000488896 CNKSR3Q6P9H4 555 aa7.6□□□□□ -1.19
PTPN4-212ENST00000488896 TMEFF1Q8IYR6 380 aa7.6□□□□□ -1.19
PTPN4-212ENST00000488896 NPLOC4Q8TAT6 608 aa7.6□□□□□ -1.19
PTPN4-212ENST00000488896 ALG3Q92685 438 aa7.6□□□□□ -1.19
PTPN4-212ENST00000488896 TRIM55Q9BYV6 548 aa7.6□□□□□ -1.19
PTPN4-212ENST00000488896 EPB41L4AQ9HCS5 686 aaPredicted RBP7.6□□□□□ -1.19
PTPN4-212ENST00000488896 IRS4O14654 1257 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms