RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	SHH	Q15465	462 aa		19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	ASPRV1	Q53RT3	343 aa		19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	IFIT1B	Q5T764	474 aa	Known RBP	19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	IQSEC1	Q6DN90	963 aa		19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	KIAA1211	Q6ZU35	1233 aa		19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	STOX1	Q6ZVD7	989 aa		19.98	■□□□□ 0.79
SUN1-233	ENST00000488628		Q7L0L9	218 aa		19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	TLK2	Q86UE8	772 aa		19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	VTI1A	Q96AJ9	217 aa		19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	GLT1D1	Q96MS3	346 aa		19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	JMJD4	Q9H9V9	463 aa		19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	VTA1	Q9NP79	307 aa		19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	ADD3	Q9UEY8	706 aa	Known RBP	19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	ELP1	O95163	1332 aa		19.98	■□□□□ 0.79
SUN1-233	ENST00000488628	EPHB4	P54760	987 aa		19.97	■□□□□ 0.79
SUN1-233	ENST00000488628	QRICH1	Q2TAL8	776 aa		19.97	■□□□□ 0.79
SUN1-233	ENST00000488628	CXCL17	Q6UXB2	119 aa		19.97	■□□□□ 0.79
SUN1-233	ENST00000488628	TOX2	Q96NM4	488 aa		19.97	■□□□□ 0.79
SUN1-233	ENST00000488628	TMEM39A	Q9NV64	488 aa		19.97	■□□□□ 0.79
SUN1-233	ENST00000488628		U3KPZ7	1027 aa	Predicted RBP	19.97	■□□□□ 0.79
SUN1-233	ENST00000488628	FSCN1	Q16658	493 aa	Known RBP	19.96	■□□□□ 0.79
SUN1-233	ENST00000488628	CHST3	Q7LGC8	479 aa		19.96	■□□□□ 0.79
SUN1-233	ENST00000488628	PNMA2	Q9UL42	364 aa		19.96	■□□□□ 0.79
SUN1-233	ENST00000488628	DCDC2C	A8MYV0	355 aa		19.95	■□□□□ 0.78
SUN1-233	ENST00000488628		E7EWF7	191 aa		19.95	■□□□□ 0.78
SUN1-233	ENST00000488628	ARVCF	O00192	962 aa		19.95	■□□□□ 0.78
SUN1-233	ENST00000488628	SLC35G1	Q2M3R5	365 aa		19.95	■□□□□ 0.78
SUN1-233	ENST00000488628	MAP4K1	Q92918	833 aa		19.95	■□□□□ 0.78
SUN1-233	ENST00000488628	WDR11	Q9BZH6	1224 aa		19.95	■□□□□ 0.78
SUN1-233	ENST00000488628	AP5M1	Q9H0R1	490 aa		19.95	■□□□□ 0.78
SUN1-233	ENST00000488628	COL20A1	Q9P218	1284 aa		19.95	■□□□□ 0.78
SUN1-233	ENST00000488628	MAD2L2	Q9UI95	211 aa		19.95	■□□□□ 0.78
SUN1-233	ENST00000488628	GRIN2D	O15399	1336 aa		19.95	■□□□□ 0.78
SUN1-233	ENST00000488628		A0A0U1RQG5	324 aa	Predicted RBP	19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	RBM47	A0AV96	593 aa	Known RBP	19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	DHX16	O60231	1041 aa	Known RBP	19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	RAG1	P15918	1043 aa		19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	EDNRB	P24530	442 aa		19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	TRDN	Q13061	729 aa		19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	DUSP28	Q4G0W2	176 aa		19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	GPR153	Q6NV75	609 aa		19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	DEFB123	Q8N688	67 aa		19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	RGS22	Q8NE09	1264 aa		19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	TAAR1	Q96RJ0	339 aa		19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	TBX21	Q9UL17	535 aa		19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	RBM8A	Q9Y5S9	174 aa	Known RBP	19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	ABCB11	O95342	1321 aa		19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	KIAA1217	Q5T5P2	1943 aa		19.94	■□□□□ 0.78
SUN1-233	ENST00000488628	LOC102724159	A0A0B4J2E5	919 aa		19.93	■□□□□ 0.78
SUN1-233	ENST00000488628	PALM3	A6NDB9	673 aa	Predicted RBP	19.93	■□□□□ 0.78
SUN1-233	ENST00000488628	IFIT3	O14879	490 aa	Known RBP	19.93	■□□□□ 0.78
SUN1-233	ENST00000488628	PPP1R11	O60927	126 aa	Predicted RBP	19.93	■□□□□ 0.78
SUN1-233	ENST00000488628	ANTXR2	P58335	489 aa		19.93	■□□□□ 0.78
SUN1-233	ENST00000488628	PDE4D	Q08499	809 aa		19.93	■□□□□ 0.78
SUN1-233	ENST00000488628	COL9A3	Q14050	684 aa	Predicted RBP	19.93	■□□□□ 0.78
SUN1-233	ENST00000488628	PWP2	Q15269	919 aa	Known RBP	19.93	■□□□□ 0.78
SUN1-233	ENST00000488628	FBXO11	Q86XK2	927 aa		19.93	■□□□□ 0.78
SUN1-233	ENST00000488628	FAM126B	Q8IXS8	530 aa		19.93	■□□□□ 0.78
SUN1-233	ENST00000488628	SYTL5	Q8TDW5	730 aa	Predicted RBP	19.93	■□□□□ 0.78
SUN1-233	ENST00000488628		Q9Y3F1	56 aa		19.93	■□□□□ 0.78
SUN1-233	ENST00000488628	KLRF2	D3W0D1	207 aa		19.92	■□□□□ 0.78
SUN1-233	ENST00000488628	PSMC6	P62333	389 aa		19.92	■□□□□ 0.78
SUN1-233	ENST00000488628	SLC43A3	Q8NBI5	491 aa		19.92	■□□□□ 0.78
SUN1-233	ENST00000488628	DNER	Q8NFT8	737 aa		19.92	■□□□□ 0.78
SUN1-233	ENST00000488628	NCOA7	Q8NI08	942 aa		19.92	■□□□□ 0.78
SUN1-233	ENST00000488628	COPS5	Q92905	334 aa		19.92	■□□□□ 0.78
SUN1-233	ENST00000488628	MTMR8	Q96EF0	704 aa		19.92	■□□□□ 0.78
SUN1-233	ENST00000488628	LSG1	Q9H089	658 aa	Known RBP	19.92	■□□□□ 0.78
SUN1-233	ENST00000488628	GPHN	Q9NQX3	736 aa	Predicted RBP	19.92	■□□□□ 0.78
SUN1-233	ENST00000488628	OPLAH	O14841	1288 aa		19.91	■□□□□ 0.78
SUN1-233	ENST00000488628	TIMP1	P01033	207 aa		19.91	■□□□□ 0.78
SUN1-233	ENST00000488628	ITGA7	Q13683	1181 aa		19.91	■□□□□ 0.78
SUN1-233	ENST00000488628	GRM4	Q14833	912 aa		19.91	■□□□□ 0.78
SUN1-233	ENST00000488628	MB21D2	Q8IYB1	491 aa	Predicted RBP	19.91	■□□□□ 0.78
SUN1-233	ENST00000488628	MYH7B	A7E2Y1	1941 aa		19.9	■□□□□ 0.78
SUN1-233	ENST00000488628	ARIH2	O95376	493 aa		19.9	■□□□□ 0.78
SUN1-233	ENST00000488628	CD4	P01730	458 aa		19.9	■□□□□ 0.78
SUN1-233	ENST00000488628	WTAP	Q15007	396 aa		19.9	■□□□□ 0.78
SUN1-233	ENST00000488628	RALYL	Q86SE5	291 aa	Known RBP	19.9	■□□□□ 0.78
SUN1-233	ENST00000488628	IGDCC4	Q8TDY8	1250 aa		19.9	■□□□□ 0.78
SUN1-233	ENST00000488628	ESYT1	Q9BSJ8	1104 aa		19.9	■□□□□ 0.78
SUN1-233	ENST00000488628	MTMR10	Q9NXD2	777 aa		19.9	■□□□□ 0.78
SUN1-233	ENST00000488628	MRPL11	Q9Y3B7	192 aa	Known RBP	19.9	■□□□□ 0.78
SUN1-233	ENST00000488628	MROH7	Q68CQ1	1323 aa		19.9	■□□□□ 0.78
SUN1-233	ENST00000488628	CYTH3	O43739	400 aa		19.89	■□□□□ 0.77
SUN1-233	ENST00000488628	ZEB2	O60315	1214 aa		19.89	■□□□□ 0.77
SUN1-233	ENST00000488628	CABYR	O75952	493 aa		19.89	■□□□□ 0.77
SUN1-233	ENST00000488628	FPGS	Q05932	587 aa		19.89	■□□□□ 0.77
SUN1-233	ENST00000488628	TROAP	Q12815	778 aa		19.89	■□□□□ 0.77
SUN1-233	ENST00000488628	OR6J1	Q8NGC5	347 aa		19.89	■□□□□ 0.77
SUN1-233	ENST00000488628	PPP1R12C	Q9BZL4	782 aa		19.89	■□□□□ 0.77
SUN1-233	ENST00000488628	TRPV6	Q9H1D0	765 aa		19.89	■□□□□ 0.77
SUN1-233	ENST00000488628	SCN10A	Q9Y5Y9	1956 aa		19.89	■□□□□ 0.77
SUN1-233	ENST00000488628	ZBTB5	O15062	677 aa		19.88	■□□□□ 0.77
SUN1-233	ENST00000488628	TMEM67	Q5HYA8	995 aa		19.88	■□□□□ 0.77
SUN1-233	ENST00000488628	MFSD5	Q6N075	450 aa		19.88	■□□□□ 0.77
SUN1-233	ENST00000488628	C16orf59	Q7L2K0	433 aa		19.88	■□□□□ 0.77
SUN1-233	ENST00000488628	MCF2L2	Q86YR7	1114 aa		19.88	■□□□□ 0.77
SUN1-233	ENST00000488628	SCFD2	Q8WU76	684 aa		19.88	■□□□□ 0.77
SUN1-233	ENST00000488628	PPP1R13L	Q8WUF5	828 aa		19.88	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms