RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 GOLGA8AA7E2F4 631 aa17.43■□□□□ 0.38
CXCL12-207ENST00000488591 GOLGA8BA8MQT2 603 aa17.43■□□□□ 0.38
CXCL12-207ENST00000488591 PLEKHA8P1O95397 391 aa17.43■□□□□ 0.38
CXCL12-207ENST00000488591 SNAI1O95863 264 aaPredicted RBP17.43■□□□□ 0.38
CXCL12-207ENST00000488591 APOBRQ0VD83 1088 aa17.43■□□□□ 0.38
CXCL12-207ENST00000488591 PWP2Q15269 919 aaKnown RBP17.43■□□□□ 0.38
CXCL12-207ENST00000488591 SLC35G1Q2M3R5 365 aa17.43■□□□□ 0.38
CXCL12-207ENST00000488591 SLC30A10Q6XR72 485 aa17.43■□□□□ 0.38
CXCL12-207ENST00000488591 TMTC3Q6ZXV5 915 aa17.43■□□□□ 0.38
CXCL12-207ENST00000488591 SAMD3Q8N6K7 520 aa17.43■□□□□ 0.38
CXCL12-207ENST00000488591 FGD4Q96M96 766 aa17.43■□□□□ 0.38
CXCL12-207ENST00000488591 ABHD16BQ9H3Z7 469 aa17.43■□□□□ 0.38
CXCL12-207ENST00000488591 OGDHLQ9ULD0 1010 aa17.43■□□□□ 0.38
CXCL12-207ENST00000488591 BAZ2BQ9UIF8 2168 aaKnown RBP17.42■□□□□ 0.38
CXCL12-207ENST00000488591 PPP1R11O60927 126 aaPredicted RBP17.42■□□□□ 0.38
CXCL12-207ENST00000488591 FARP2O94887 1054 aaPredicted RBP17.42■□□□□ 0.38
CXCL12-207ENST00000488591 AKR1A1P14550 325 aa17.42■□□□□ 0.38
CXCL12-207ENST00000488591 METAP2P50579 478 aaKnown RBP eCLIP17.42■□□□□ 0.38
CXCL12-207ENST00000488591 LHX8Q68G74 356 aa17.42■□□□□ 0.38
CXCL12-207ENST00000488591 CMTR1Q8N1G2 835 aaKnown RBP17.42■□□□□ 0.38
CXCL12-207ENST00000488591 CCDC82Q8N4S0 544 aa17.42■□□□□ 0.38
CXCL12-207ENST00000488591 DNERQ8NFT8 737 aa17.42■□□□□ 0.38
CXCL12-207ENST00000488591 AGXT2Q9BYV1 514 aa17.42■□□□□ 0.38
CXCL12-207ENST00000488591 PDRG1Q9NUG6 133 aa17.42■□□□□ 0.38
CXCL12-207ENST00000488591 MAP3K20Q9NYL2 800 aaKnown RBP17.42■□□□□ 0.38
CXCL12-207ENST00000488591 ZHX1Q9UKY1 873 aaPredicted RBP17.42■□□□□ 0.38
CXCL12-207ENST00000488591 FAM184BQ9ULE4 1060 aa17.42■□□□□ 0.38
CXCL12-207ENST00000488591 CFBP00751 764 aa17.41■□□□□ 0.38
CXCL12-207ENST00000488591 ZNF865P0CJ78 1059 aaPredicted RBP17.41■□□□□ 0.38
CXCL12-207ENST00000488591 ALDH5A1P51649 535 aaPredicted RBP17.41■□□□□ 0.38
CXCL12-207ENST00000488591 ACVR2BQ13705 512 aa17.41■□□□□ 0.38
CXCL12-207ENST00000488591 UPF3BQ9BZI7 483 aaKnown RBP17.41■□□□□ 0.38
CXCL12-207ENST00000488591 SEC24BO95487 1268 aa17.4■□□□□ 0.38
CXCL12-207ENST00000488591 RARBP10826 455 aa17.4■□□□□ 0.38
CXCL12-207ENST00000488591 C8orf34Q49A92 452 aa17.4■□□□□ 0.38
CXCL12-207ENST00000488591 ARRDC4Q8NCT1 418 aa17.4■□□□□ 0.38
CXCL12-207ENST00000488591 SYTL5Q8TDW5 730 aaPredicted RBP17.4■□□□□ 0.38
CXCL12-207ENST00000488591 TBC1D5Q92609 795 aa17.4■□□□□ 0.38
CXCL12-207ENST00000488591 PURBQ96QR8 312 aaKnown RBP17.4■□□□□ 0.38
CXCL12-207ENST00000488591 GTF3C3Q9Y5Q9 886 aa17.4■□□□□ 0.38
CXCL12-207ENST00000488591 GCOM1H8Y6P7 765 aaPredicted RBP17.39■□□□□ 0.37
CXCL12-207ENST00000488591 POLR2MP0CAP2 368 aa17.39■□□□□ 0.37
CXCL12-207ENST00000488591 PDE4DQ08499 809 aa17.39■□□□□ 0.37
CXCL12-207ENST00000488591 ANO1Q5XXA6 986 aa17.39■□□□□ 0.37
CXCL12-207ENST00000488591 NECAB2Q7Z6G3 386 aa17.39■□□□□ 0.37
CXCL12-207ENST00000488591 MORC4Q8TE76 937 aa17.39■□□□□ 0.37
CXCL12-207ENST00000488591 NSUN6Q8TEA1 469 aaKnown RBP17.39■□□□□ 0.37
CXCL12-207ENST00000488591 ASTN1O14525 1302 aa17.39■□□□□ 0.37
CXCL12-207ENST00000488591 HSD17B4P51659 736 aa17.38■□□□□ 0.37
CXCL12-207ENST00000488591 EVCP57679 992 aa17.38■□□□□ 0.37
CXCL12-207ENST00000488591 GHRHRQ02643 423 aa17.38■□□□□ 0.37
CXCL12-207ENST00000488591 TOB2Q14106 344 aaPredicted RBP17.38■□□□□ 0.37
CXCL12-207ENST00000488591 CCDC144BQ3MJ40 725 aa17.38■□□□□ 0.37
CXCL12-207ENST00000488591 ARHGEF16Q5VV41 709 aa17.38■□□□□ 0.37
CXCL12-207ENST00000488591 CUL5Q93034 780 aa17.38■□□□□ 0.37
CXCL12-207ENST00000488591 PAWRQ96IZ0 340 aaKnown RBP17.38■□□□□ 0.37
CXCL12-207ENST00000488591 TAAR1Q96RJ0 339 aa17.38■□□□□ 0.37
CXCL12-207ENST00000488591 RMDN3Q96TC7 470 aa17.38■□□□□ 0.37
CXCL12-207ENST00000488591 HTATIP2Q9BUP3 242 aa17.38■□□□□ 0.37
CXCL12-207ENST00000488591 VTA1Q9NP79 307 aa17.38■□□□□ 0.37
CXCL12-207ENST00000488591 XPNPEP3Q9NQH7 507 aa17.38■□□□□ 0.37
CXCL12-207ENST00000488591 MCM3APO60318 1980 aa17.38■□□□□ 0.37
CXCL12-207ENST00000488591 OPLAHO14841 1288 aa17.37■□□□□ 0.37
CXCL12-207ENST00000488591 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
CXCL12-207ENST00000488591 PDIA3P30101 505 aaKnown RBP17.37■□□□□ 0.37
CXCL12-207ENST00000488591 CDC27P30260 824 aa17.37■□□□□ 0.37
CXCL12-207ENST00000488591 ADD1P35611 737 aaKnown RBP17.37■□□□□ 0.37
CXCL12-207ENST00000488591 ANKRD1Q15327 319 aa17.37■□□□□ 0.37
CXCL12-207ENST00000488591 IQSEC1Q6DN90 963 aa17.37■□□□□ 0.37
CXCL12-207ENST00000488591 NOL8Q76FK4 1167 aaKnown RBP17.37■□□□□ 0.37
CXCL12-207ENST00000488591 EEPD1Q7L9B9 569 aa17.37■□□□□ 0.37
CXCL12-207ENST00000488591 ZNF274Q96GC6 653 aaPredicted RBP17.37■□□□□ 0.37
CXCL12-207ENST00000488591 IWS1Q96ST2 819 aa17.37■□□□□ 0.37
CXCL12-207ENST00000488591 ALDH8A1Q9H2A2 487 aaPredicted RBP17.37■□□□□ 0.37
CXCL12-207ENST00000488591 SPC25Q9HBM1 224 aa17.37■□□□□ 0.37
CXCL12-207ENST00000488591 FAM217BQ9NTX9 383 aaPredicted RBP17.37■□□□□ 0.37
CXCL12-207ENST00000488591 V9GY48 417 aaPredicted RBP17.37■□□□□ 0.37
CXCL12-207ENST00000488591 CNTNAP5Q8WYK1 1306 aa17.37■□□□□ 0.37
CXCL12-207ENST00000488591 LCTP09848 1927 aa17.37■□□□□ 0.37
CXCL12-207ENST00000488591 hCG_1642624A0A1W2PR95 340 aa17.36■□□□□ 0.37
CXCL12-207ENST00000488591 KBTBD13C9JR72 458 aa17.36■□□□□ 0.37
CXCL12-207ENST00000488591 DNM1LO00429 736 aa17.36■□□□□ 0.37
CXCL12-207ENST00000488591 DUSP11O75319 330 aaKnown RBP17.36■□□□□ 0.37
CXCL12-207ENST00000488591 HOXA13P31271 388 aaPredicted RBP17.36■□□□□ 0.37
CXCL12-207ENST00000488591 AKAP17AQ02040 695 aaKnown RBP17.36■□□□□ 0.37
CXCL12-207ENST00000488591 TNFAIP2Q03169 654 aa17.36■□□□□ 0.37
CXCL12-207ENST00000488591 HEATR3Q7Z4Q2 680 aa17.36■□□□□ 0.37
CXCL12-207ENST00000488591 UBE2Q1Q7Z7E8 422 aa17.36■□□□□ 0.37
CXCL12-207ENST00000488591 RNF180Q86T96 592 aa17.36■□□□□ 0.37
CXCL12-207ENST00000488591 SMARCC2Q8TAQ2 1214 aa17.36■□□□□ 0.37
CXCL12-207ENST00000488591 IL17RAQ96F46 866 aa17.36■□□□□ 0.37
CXCL12-207ENST00000488591 KATNBL1Q9H079 304 aa17.36■□□□□ 0.37
CXCL12-207ENST00000488591 C11orf49Q9H6J7 331 aa17.36■□□□□ 0.37
CXCL12-207ENST00000488591 UPF2Q9HAU5 1272 aaKnown RBP17.36■□□□□ 0.37
CXCL12-207ENST00000488591 RBM27Q9P2N5 1060 aaKnown RBP17.36■□□□□ 0.37
CXCL12-207ENST00000488591 NID2Q14112 1375 aa17.36■□□□□ 0.37
CXCL12-207ENST00000488591 FRMPD3Q5JV73 1810 aa17.35■□□□□ 0.37
CXCL12-207ENST00000488591 EDNRBP24530 442 aa17.35■□□□□ 0.37
CXCL12-207ENST00000488591 CCT2P78371 535 aaKnown RBP17.35■□□□□ 0.37
CXCL12-207ENST00000488591 FUT2Q10981 343 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms