RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 KANSL1LA0AUZ9 987 aa7□□□□□ -1.29
SIK3-212ENST00000488337 SIGLEC16A6NMB1 481 aa7□□□□□ -1.29
SIK3-212ENST00000488337 GNAT3A8MTJ3 354 aa7□□□□□ -1.29
SIK3-212ENST00000488337 TRAPPC3O43617 180 aa7□□□□□ -1.29
SIK3-212ENST00000488337 ZBED4O75132 1171 aa7□□□□□ -1.29
SIK3-212ENST00000488337 PORP16435 677 aaPredicted RBP7□□□□□ -1.29
SIK3-212ENST00000488337 SARSP49591 514 aaKnown RBP7□□□□□ -1.29
SIK3-212ENST00000488337 SEC24CP53992 1094 aa7□□□□□ -1.29
SIK3-212ENST00000488337 PARP10Q53GL7 1025 aa7□□□□□ -1.29
SIK3-212ENST00000488337 SPECC1Q5M775 1068 aa7□□□□□ -1.29
SIK3-212ENST00000488337 NECAB1Q8N987 351 aa7□□□□□ -1.29
SIK3-212ENST00000488337 CLK4Q9HAZ1 481 aaKnown RBP7□□□□□ -1.29
SIK3-212ENST00000488337 EXOC1Q9NV70 894 aa7□□□□□ -1.29
SIK3-212ENST00000488337 BAIAP2L1Q9UHR4 511 aa7□□□□□ -1.29
SIK3-212ENST00000488337 KIF20BQ96Q89 1820 aa7□□□□□ -1.29
SIK3-212ENST00000488337 LMTK3Q96Q04 1460 aa7□□□□□ -1.29
SIK3-212ENST00000488337 E7ENQ6 273 aa7□□□□□ -1.29
SIK3-212ENST00000488337 TROVE2P10155 538 aaKnown RBP eCLIP7□□□□□ -1.29
SIK3-212ENST00000488337 ACADSP16219 412 aa7□□□□□ -1.29
SIK3-212ENST00000488337 GSTT1P30711 240 aa7□□□□□ -1.29
SIK3-212ENST00000488337 ZNF132P52740 706 aa7□□□□□ -1.29
SIK3-212ENST00000488337 ITGB3BPQ13352 177 aaPredicted RBP7□□□□□ -1.29
SIK3-212ENST00000488337 ADALQ6DHV7 355 aa7□□□□□ -1.29
SIK3-212ENST00000488337 BLOC1S2Q6QNY1 142 aa7□□□□□ -1.29
SIK3-212ENST00000488337 RASEFQ8IZ41 740 aa7□□□□□ -1.29
SIK3-212ENST00000488337 GDAP1Q8TB36 358 aa7□□□□□ -1.29
SIK3-212ENST00000488337 ATP8B4Q8TF62 1192 aa7□□□□□ -1.29
SIK3-212ENST00000488337 RBM33Q96EV2 1170 aaKnown RBP7□□□□□ -1.29
SIK3-212ENST00000488337 FGD4Q96M96 766 aa7□□□□□ -1.29
SIK3-212ENST00000488337 RPS6KC1Q96S38 1066 aa7□□□□□ -1.29
SIK3-212ENST00000488337 CDC5LQ99459 802 aaKnown RBP7□□□□□ -1.29
SIK3-212ENST00000488337 CCDC68Q9H2F9 335 aa7□□□□□ -1.29
SIK3-212ENST00000488337 STRN4Q9NRL3 753 aa7□□□□□ -1.29
SIK3-212ENST00000488337 HYPKQ9NX55 129 aa7□□□□□ -1.29
SIK3-212ENST00000488337 PCDHB2Q9Y5E7 798 aa7□□□□□ -1.29
SIK3-212ENST00000488337 CTAGE15A4D2H0 777 aa7□□□□□ -1.29
SIK3-212ENST00000488337 LDHAP00338 332 aaKnown RBP7□□□□□ -1.29
SIK3-212ENST00000488337 ASLP04424 464 aa7□□□□□ -1.29
SIK3-212ENST00000488337 CYP1A1P04798 512 aaPredicted RBP7□□□□□ -1.29
SIK3-212ENST00000488337 CTAGE8P0CG41 777 aa7□□□□□ -1.29
SIK3-212ENST00000488337 COPB2P35606 906 aa7□□□□□ -1.29
SIK3-212ENST00000488337 GUCY1A3Q02108 690 aa7□□□□□ -1.29
SIK3-212ENST00000488337 ARHGEF6Q15052 776 aa7□□□□□ -1.29
SIK3-212ENST00000488337 CTAGE6Q86UF2 777 aa7□□□□□ -1.29
SIK3-212ENST00000488337 CTAGE4Q8IX94 777 aa7□□□□□ -1.29
SIK3-212ENST00000488337 SPICE1Q8N0Z3 855 aa7□□□□□ -1.29
SIK3-212ENST00000488337 EGLN2Q96KS0 407 aa7□□□□□ -1.29
SIK3-212ENST00000488337 CCDC85AQ96PX6 553 aaPredicted RBP7□□□□□ -1.29
SIK3-212ENST00000488337 NR1H4Q96RI1 486 aaPredicted RBP7□□□□□ -1.29
SIK3-212ENST00000488337 USP44Q9H0E7 712 aa7□□□□□ -1.29
SIK3-212ENST00000488337 SLC12A6Q9UHW9 1150 aa7□□□□□ -1.29
SIK3-212ENST00000488337 JCADQ9P266 1359 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 AOX1Q06278 1338 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 CCDC162PA2VCL2 907 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 BTBD19C9JJ37 291 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 ADD1P35611 737 aaKnown RBP6.99□□□□□ -1.29
SIK3-212ENST00000488337 ANKRD1Q15327 319 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 CFAP157Q5JU67 520 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 PRDM11Q9NQV5 511 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 TBCCD1Q9NVR7 557 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 RMND1Q9NWS8 449 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 RHBDL2Q9NX52 303 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 FAM184BQ9ULE4 1060 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 ZNF148Q9UQR1 794 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 ATP7BP35670 1465 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 ACEP12821 1306 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 EMP3P54852 163 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 NLRP6P59044 892 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 NLRP5P59047 1200 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 TEFQ10587 303 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 CNGA3Q16281 694 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 GLE1Q53GS7 698 aaKnown RBP6.99□□□□□ -1.29
SIK3-212ENST00000488337 FAM209AQ5JX71 171 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 SYDE2Q5VT97 1194 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 WDR78Q5VTH9 848 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 HIBCHQ6NVY1 386 aaPredicted RBP6.99□□□□□ -1.29
SIK3-212ENST00000488337 TRAPPC11Q7Z392 1133 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 CTNNBL1Q8WYA6 563 aaPredicted RBP6.99□□□□□ -1.29
SIK3-212ENST00000488337 DPF2Q92785 391 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 SEC16BQ96JE7 1060 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 SYNCQ9H7C4 482 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 ZNHIT6Q9NWK9 470 aaKnown RBP6.99□□□□□ -1.29
SIK3-212ENST00000488337 CCPG1Q9ULG6 757 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 DAAM1Q9Y4D1 1078 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 A0A0U1RQJ8 604 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 CLASP2O75122 1294 aaKnown RBP6.99□□□□□ -1.29
SIK3-212ENST00000488337 LGR5O75473 907 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 TNFRSF8P28908 595 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 EIF2B5Q13144 721 aaKnown RBP6.99□□□□□ -1.29
SIK3-212ENST00000488337 STK3Q13188 491 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 SEPT2Q15019 361 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 SLC27A3Q5K4L6 730 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 FAM173BQ6P4H8 233 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 IQCKQ8N0W5 287 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 ATRIPQ8WXE1 791 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 CAVIN3Q969G5 261 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 ECHDC1Q9NTX5 307 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 ADAM22Q9P0K1 906 aa6.99□□□□□ -1.29
SIK3-212ENST00000488337 MAGEC2Q9UBF1 373 aaPredicted RBP6.99□□□□□ -1.29
SIK3-212ENST00000488337 ZMAT5Q9UDW3 170 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms