RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 PTPDC1A2A3K4 754 aa13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 DCDC2CA8MYV0 355 aa13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 TIMP1P01033 207 aa13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 MFAP1P55081 439 aaKnown RBP13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 PSMC6P62333 389 aa13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 USH1GQ495M9 461 aa13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 FAM109BQ6ICB4 259 aaPredicted RBP13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 KIAA1211Q6ZU35 1233 aa13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 SLC43A3Q8NBI5 491 aa13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 PNMA1Q8ND90 353 aa13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 SLC17A8Q8NDX2 589 aa13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 SPC25Q9HBM1 224 aa13.18□□□□□ -0.3
PCYT1A-215ENST00000488235 RBAK-RBAKDNI3L0D1 243 aa13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 CD4P01730 458 aa13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 FPGSQ05932 587 aa13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 TTC22Q5TAA0 569 aa13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 CYB5R4Q7L1T6 521 aa13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 DGKHQ86XP1 1220 aa13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 PPP1R13LQ8WUF5 828 aa13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 ANKS1AQ92625 1134 aa13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 RNPC3Q96LT9 517 aaKnown RBP13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 ZSCAN10Q96SZ4 725 aaPredicted RBP13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.17□□□□□ -0.37e-6■■□□□ 12.2
PCYT1A-215ENST00000488235 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 VTA1Q9NP79 307 aa13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 COL20A1Q9P218 1284 aa13.17□□□□□ -0.3
PCYT1A-215ENST00000488235 TNKSO95271 1327 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 WDR19Q8NEZ3 1342 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 ACRP10323 421 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 CSF2RAP15509 400 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 EDNRBP24530 442 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 CYP2C18P33260 490 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 SMAD3P84022 425 aaKnown RBP13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 PTH1RQ03431 593 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 CDC37Q16543 378 aaPredicted RBP13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 IQSEC1Q6DN90 963 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 MFSD5Q6N075 450 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 RNF207Q6ZRF8 634 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 ADGRF4Q8IZF3 695 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 COPS5Q92905 334 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 AP5M1Q9H0R1 490 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 TRPV6Q9H1D0 765 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 SEMA6BQ9H3T3 888 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 TRANK1O15050 2925 aa13.16□□□□□ -0.3
PCYT1A-215ENST00000488235 RBM47A0AV96 593 aaKnown RBP13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 HIP1O00291 1037 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 B4GALT4O60513 344 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 ARIH2O95376 493 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 ITGA7Q13683 1181 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 SEC23AQ15436 765 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 IMMTQ16891 758 aaKnown RBP13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 SLC35G1Q2M3R5 365 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 DUSP28Q4G0W2 176 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 TMEM240Q5SV17 173 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 GPATCH4Q5T3I0 446 aaKnown RBP13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 ZNF697Q5TEC3 545 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 IQCA1Q86XH1 822 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 STAG2Q8N3U4 1231 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 VWCEQ96DN2 955 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 CDX2Q99626 313 aaPredicted RBP13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 WDR11Q9BZH6 1224 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 JMJD4Q9H9V9 463 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 SENP2Q9HC62 589 aa13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 ADD3Q9UEY8 706 aaKnown RBP13.15□□□□□ -0.3
PCYT1A-215ENST00000488235 MROH7Q68CQ1 1323 aa13.14□□□□□ -0.31
PCYT1A-215ENST00000488235 GRXCR1A8MXD5 290 aa13.14□□□□□ -0.31
PCYT1A-215ENST00000488235 OPLAHO14841 1288 aa13.14□□□□□ -0.31
PCYT1A-215ENST00000488235 PPP1R11O60927 126 aaPredicted RBP13.14□□□□□ -0.31
PCYT1A-215ENST00000488235 QRICH1Q2TAL8 776 aa13.14□□□□□ -0.31
PCYT1A-215ENST00000488235 WNT8AQ9H1J5 351 aa13.14□□□□□ -0.31
PCYT1A-215ENST00000488235 KAT14Q9H8E8 782 aa13.14□□□□□ -0.31
PCYT1A-215ENST00000488235 VAT1LQ9HCJ6 419 aa13.14□□□□□ -0.31
PCYT1A-215ENST00000488235 Q9Y3F1 56 aa13.14□□□□□ -0.31
PCYT1A-215ENST00000488235 CYP21A2P08686 494 aa13.13□□□□□ -0.31
PCYT1A-215ENST00000488235 CHMLP26374 656 aa13.13□□□□□ -0.31
PCYT1A-215ENST00000488235 PBX2P40425 430 aa13.13□□□□□ -0.31
PCYT1A-215ENST00000488235 PURAQ00577 322 aaKnown RBP13.13□□□□□ -0.31
PCYT1A-215ENST00000488235 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
PCYT1A-215ENST00000488235 RASIP1Q5U651 963 aa13.13□□□□□ -0.31
PCYT1A-215ENST00000488235 SYTL5Q8TDW5 730 aaPredicted RBP13.13□□□□□ -0.31
PCYT1A-215ENST00000488235 MYLIPQ8WY64 445 aa13.13□□□□□ -0.31
PCYT1A-215ENST00000488235 TAAR1Q96RJ0 339 aa13.13□□□□□ -0.31
PCYT1A-215ENST00000488235 NOC4LQ9BVI4 516 aaKnown RBP13.13□□□□□ -0.31
PCYT1A-215ENST00000488235 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
PCYT1A-215ENST00000488235 CABYRO75952 493 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 PARP1P09874 1014 aaKnown RBP13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 DNAJB2P25686 324 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 CCL23P55773 120 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 PDE4DQ08499 809 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 CCDC62Q6P9F0 684 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 STOX1Q6ZVD7 989 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 ZNF365Q70YC5 407 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 DNERQ8NFT8 737 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 OR6J1Q8NGC5 347 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 KRT23Q9C075 422 aa13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 ALDH8A1Q9H2A2 487 aaPredicted RBP13.12□□□□□ -0.31
PCYT1A-215ENST00000488235 HIPK3Q9H422 1215 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms