RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 CCDC178Q5BJE1 867 aa23.71■■□□□ 1.39
TRIM8-204ENST00000487927 IQSEC1Q6DN90 963 aa23.71■■□□□ 1.39
TRIM8-204ENST00000487927 IQCA1Q86XH1 822 aa23.71■■□□□ 1.39
TRIM8-204ENST00000487927 ZSCAN10Q96SZ4 725 aaPredicted RBP23.71■■□□□ 1.39
TRIM8-204ENST00000487927 UBA5Q9GZZ9 404 aa23.71■■□□□ 1.39
TRIM8-204ENST00000487927 ZSWIM5Q9P217 1185 aa23.71■■□□□ 1.39
TRIM8-204ENST00000487927 MROH7Q68CQ1 1323 aa23.7■■□□□ 1.38
TRIM8-204ENST00000487927 FAM109BQ6ICB4 259 aaPredicted RBP23.7■■□□□ 1.38
TRIM8-204ENST00000487927 ENAHQ8N8S7 591 aaPredicted RBP23.7■■□□□ 1.38
TRIM8-204ENST00000487927 VTI1AQ96AJ9 217 aa23.7■■□□□ 1.38
TRIM8-204ENST00000487927 ADD3Q9UEY8 706 aaKnown RBP23.7■■□□□ 1.38
TRIM8-204ENST00000487927 CTNNA3Q9UI47 895 aa23.7■■□□□ 1.38
TRIM8-204ENST00000487927 PNMA2Q9UL42 364 aa23.7■■□□□ 1.38
TRIM8-204ENST00000487927 TNKSO95271 1327 aa23.69■■□□□ 1.38
TRIM8-204ENST00000487927 LOC102724159A0A0B4J2E5 919 aa23.69■■□□□ 1.38
TRIM8-204ENST00000487927 DYNC1LI2O43237 492 aaPredicted RBP23.69■■□□□ 1.38
TRIM8-204ENST00000487927 CALML3P27482 149 aa23.69■■□□□ 1.38
TRIM8-204ENST00000487927 FPGSQ05932 587 aa23.69■■□□□ 1.38
TRIM8-204ENST00000487927 PWP2Q15269 919 aaKnown RBP23.69■■□□□ 1.38
TRIM8-204ENST00000487927 FSCN1Q16658 493 aaKnown RBP23.69■■□□□ 1.38
TRIM8-204ENST00000487927 CXCL17Q6UXB2 119 aa23.69■■□□□ 1.38
TRIM8-204ENST00000487927 RNF207Q6ZRF8 634 aa23.69■■□□□ 1.38
TRIM8-204ENST00000487927 FAM126BQ8IXS8 530 aa23.69■■□□□ 1.38
TRIM8-204ENST00000487927 KAT14Q9H8E8 782 aa23.69■■□□□ 1.38
TRIM8-204ENST00000487927 Q9Y3F1 56 aa23.69■■□□□ 1.38
TRIM8-204ENST00000487927 TIMP1P01033 207 aa23.68■■□□□ 1.38
TRIM8-204ENST00000487927 RPS6P62753 249 aaKnown RBP23.68■■□□□ 1.38
TRIM8-204ENST00000487927 KIAA1211Q6ZU35 1233 aa23.68■■□□□ 1.38
TRIM8-204ENST00000487927 SLC43A3Q8NBI5 491 aa23.68■■□□□ 1.38
TRIM8-204ENST00000487927 KRT23Q9C075 422 aa23.68■■□□□ 1.38
TRIM8-204ENST00000487927 AP5M1Q9H0R1 490 aa23.68■■□□□ 1.38
TRIM8-204ENST00000487927 STXBP5LQ9Y2K9 1186 aa23.68■■□□□ 1.38
TRIM8-204ENST00000487927 USH1GQ495M9 461 aa23.67■■□□□ 1.38
TRIM8-204ENST00000487927 GUCD1Q96NT3 240 aa23.67■■□□□ 1.38
TRIM8-204ENST00000487927 IPO9Q96P70 1041 aaKnown RBP23.67■■□□□ 1.38
TRIM8-204ENST00000487927 GRIN2DO15399 1336 aa23.66■■□□□ 1.38
TRIM8-204ENST00000487927 RAD50Q92878 1312 aa23.66■■□□□ 1.38
TRIM8-204ENST00000487927 RBM47A0AV96 593 aaKnown RBP23.66■■□□□ 1.38
TRIM8-204ENST00000487927 CABYRO75952 493 aa23.66■■□□□ 1.38
TRIM8-204ENST00000487927 CD4P01730 458 aa23.66■■□□□ 1.38
TRIM8-204ENST00000487927 EDNRBP24530 442 aa23.66■■□□□ 1.38
TRIM8-204ENST00000487927 CDC37Q16543 378 aaPredicted RBP23.66■■□□□ 1.38
TRIM8-204ENST00000487927 DUSP28Q4G0W2 176 aa23.66■■□□□ 1.38
TRIM8-204ENST00000487927 ADGRF4Q8IZF3 695 aa23.66■■□□□ 1.38
TRIM8-204ENST00000487927 CNNM2Q9H8M5 875 aa23.66■■□□□ 1.38
TRIM8-204ENST00000487927 SMAD3P84022 425 aaKnown RBP23.65■■□□□ 1.38
TRIM8-204ENST00000487927 ASPRV1Q53RT3 343 aa23.65■■□□□ 1.38
TRIM8-204ENST00000487927 MFSD5Q6N075 450 aa23.65■■□□□ 1.38
TRIM8-204ENST00000487927 RNPC3Q96LT9 517 aaKnown RBP23.65■■□□□ 1.38
TRIM8-204ENST00000487927 FAM161BQ96MY7 647 aa23.65■■□□□ 1.38
TRIM8-204ENST00000487927 TBC1D32Q96NH3 1257 aa23.65■■□□□ 1.38
TRIM8-204ENST00000487927 WDR11Q9BZH6 1224 aa23.65■■□□□ 1.38
TRIM8-204ENST00000487927 CHMLP26374 656 aa23.64■■□□□ 1.37
TRIM8-204ENST00000487927 PTH1RQ03431 593 aa23.64■■□□□ 1.37
TRIM8-204ENST00000487927 ITGA7Q13683 1181 aa23.64■■□□□ 1.37
TRIM8-204ENST00000487927 SEC23AQ15436 765 aa23.64■■□□□ 1.37
TRIM8-204ENST00000487927 CYB5R4Q7L1T6 521 aa23.64■■□□□ 1.37
TRIM8-204ENST00000487927 RGS22Q8NE09 1264 aa23.64■■□□□ 1.37
TRIM8-204ENST00000487927 DNERQ8NFT8 737 aa23.64■■□□□ 1.37
TRIM8-204ENST00000487927 TBC1D5Q92609 795 aa23.64■■□□□ 1.37
TRIM8-204ENST00000487927 TLR3O15455 904 aaKnown RBP23.63■■□□□ 1.37
TRIM8-204ENST00000487927 ZEB2O60315 1214 aa23.63■■□□□ 1.37
TRIM8-204ENST00000487927 QRICH1Q2TAL8 776 aa23.63■■□□□ 1.37
TRIM8-204ENST00000487927 ZNF697Q5TEC3 545 aa23.63■■□□□ 1.37
TRIM8-204ENST00000487927 C16orf59Q7L2K0 433 aa23.63■■□□□ 1.37
TRIM8-204ENST00000487927 SLC17A8Q8NDX2 589 aa23.63■■□□□ 1.37
TRIM8-204ENST00000487927 UBAC1Q9BSL1 405 aa23.63■■□□□ 1.37
TRIM8-204ENST00000487927 PPP1R12CQ9BZL4 782 aa23.63■■□□□ 1.37
TRIM8-204ENST00000487927 KIAA1217Q5T5P2 1943 aa23.63■■□□□ 1.37
TRIM8-204ENST00000487927 ABCB11O95342 1321 aa23.62■■□□□ 1.37
TRIM8-204ENST00000487927 SCN10AQ9Y5Y9 1956 aa23.62■■□□□ 1.37
TRIM8-204ENST00000487927 SEC24BO95487 1268 aa23.62■■□□□ 1.37
TRIM8-204ENST00000487927 CYP21A2P08686 494 aa23.62■■□□□ 1.37
TRIM8-204ENST00000487927 PARP1P09874 1014 aaKnown RBP23.62■■□□□ 1.37
TRIM8-204ENST00000487927 PSMC6P62333 389 aa23.62■■□□□ 1.37
TRIM8-204ENST00000487927 PDE4DQ08499 809 aa23.62■■□□□ 1.37
TRIM8-204ENST00000487927 STAG2Q8N3U4 1231 aa23.62■■□□□ 1.37
TRIM8-204ENST00000487927 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.62■■□□□ 1.379e-8■■■□□ 16.3
TRIM8-204ENST00000487927 JMJD4Q9H9V9 463 aa23.62■■□□□ 1.37
TRIM8-204ENST00000487927 CSF2RAP15509 400 aa23.61■■□□□ 1.37
TRIM8-204ENST00000487927 IFIT1BQ5T764 474 aaKnown RBP23.61■■□□□ 1.37
TRIM8-204ENST00000487927 TTYH1Q9H313 450 aaPredicted RBP23.61■■□□□ 1.37
TRIM8-204ENST00000487927 COL20A1Q9P218 1284 aa23.61■■□□□ 1.37
TRIM8-204ENST00000487927 TAF6LQ9Y6J9 622 aa23.61■■□□□ 1.37
TRIM8-204ENST00000487927 PPIGQ13427 754 aaKnown RBP eCLIP23.6■■□□□ 1.371e-7■■□□□ 11.4
TRIM8-204ENST00000487927 SYTL5Q8TDW5 730 aaPredicted RBP23.6■■□□□ 1.37
TRIM8-204ENST00000487927 RUFY2Q8WXA3 655 aa23.6■■□□□ 1.37
TRIM8-204ENST00000487927 MAF1Q9H063 256 aa23.6■■□□□ 1.37
TRIM8-204ENST00000487927 SEMA6BQ9H3T3 888 aa23.6■■□□□ 1.37
TRIM8-204ENST00000487927 VAT1LQ9HCJ6 419 aa23.6■■□□□ 1.37
TRIM8-204ENST00000487927 BAZ2BQ9UIF8 2168 aaKnown RBP23.59■■□□□ 1.37
TRIM8-204ENST00000487927 UMODL1Q5DID0 1318 aa23.59■■□□□ 1.37
TRIM8-204ENST00000487927 SGSM2O43147 1006 aa23.59■■□□□ 1.37
TRIM8-204ENST00000487927 B4GALT4O60513 344 aa23.59■■□□□ 1.37
TRIM8-204ENST00000487927 CYP2C18P33260 490 aa23.59■■□□□ 1.37
TRIM8-204ENST00000487927 PURAQ00577 322 aaKnown RBP23.59■■□□□ 1.37
TRIM8-204ENST00000487927 TMEM240Q5SV17 173 aa23.59■■□□□ 1.37
TRIM8-204ENST00000487927 TMEM199Q8N511 208 aa23.59■■□□□ 1.37
TRIM8-204ENST00000487927 OR6J1Q8NGC5 347 aa23.59■■□□□ 1.37
TRIM8-204ENST00000487927 COPS5Q92905 334 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms