RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 HCFC2Q9Y5Z7 792 aa6.78□□□□□ -1.32
CCDC66-221ENST00000487739 C2orf71A6NGG8 1288 aa6.77□□□□□ -1.33
CCDC66-221ENST00000487739 VAMP4O75379 141 aa6.77□□□□□ -1.33
CCDC66-221ENST00000487739 FBLN1P23142 703 aa6.77□□□□□ -1.33
CCDC66-221ENST00000487739 LIMS1P48059 325 aa6.77□□□□□ -1.33
CCDC66-221ENST00000487739 CASP7P55210 303 aa6.77□□□□□ -1.33
CCDC66-221ENST00000487739 PRR5P85299 388 aa6.77□□□□□ -1.33
CCDC66-221ENST00000487739 CAP1Q01518 475 aa6.77□□□□□ -1.33
CCDC66-221ENST00000487739 C9orf131Q5VYM1 1079 aa6.77□□□□□ -1.33
CCDC66-221ENST00000487739 ARHGEF39Q8N4T4 335 aa6.77□□□□□ -1.33
CCDC66-221ENST00000487739 RNF38Q9H0F5 515 aa6.77□□□□□ -1.33
CCDC66-221ENST00000487739 LUC7LQ9NQ29 371 aaKnown RBP6.77□□□□□ -1.33
CCDC66-221ENST00000487739 STRIP2Q9ULQ0 834 aa6.77□□□□□ -1.33
CCDC66-221ENST00000487739 TRBV23OR9-2A0A075B6M9 112 aa6.76□□□□□ -1.33
CCDC66-221ENST00000487739 ZC3H12DA2A288 527 aaKnown RBP6.76□□□□□ -1.33
CCDC66-221ENST00000487739 ANKRD34BA5PLL1 514 aa6.76□□□□□ -1.33
CCDC66-221ENST00000487739 OTOL1A6NHN0 477 aaPredicted RBP6.76□□□□□ -1.33
CCDC66-221ENST00000487739 GLI4P10075 376 aa6.76□□□□□ -1.33
CCDC66-221ENST00000487739 VHLLQ6RSH7 139 aa6.76□□□□□ -1.33
CCDC66-221ENST00000487739 LZTR1Q8N653 840 aa6.76□□□□□ -1.33
CCDC66-221ENST00000487739 TGIF2Q9GZN2 237 aa6.76□□□□□ -1.33
CCDC66-221ENST00000487739 FAN1Q9Y2M0 1017 aa6.76□□□□□ -1.33
CCDC66-221ENST00000487739 FOXD2O60548 495 aaPredicted RBP6.75□□□□□ -1.33
CCDC66-221ENST00000487739 PAMP19021 973 aa6.75□□□□□ -1.33
CCDC66-221ENST00000487739 BUD31P41223 144 aaPredicted RBP6.75□□□□□ -1.33
CCDC66-221ENST00000487739 KIAA1211LQ6NV74 962 aa6.75□□□□□ -1.33
CCDC66-221ENST00000487739 HOMEZQ8IX15 550 aa6.75□□□□□ -1.33
CCDC66-221ENST00000487739 CRACR2BQ8N4Y2 399 aaPredicted RBP6.75□□□□□ -1.33
CCDC66-221ENST00000487739 FEZF2Q8TBJ5 459 aa6.75□□□□□ -1.33
CCDC66-221ENST00000487739 ALG3Q92685 438 aa6.75□□□□□ -1.33
CCDC66-221ENST00000487739 SUSD2Q9UGT4 822 aa6.75□□□□□ -1.33
CCDC66-221ENST00000487739 NUDT5Q9UKK9 219 aa6.75□□□□□ -1.33
CCDC66-221ENST00000487739 RWDD3Q9Y3V2 267 aa6.75□□□□□ -1.33
CCDC66-221ENST00000487739 NPHP3-ACAD11A0A0J9YXS1 232 aa6.74□□□□□ -1.33
CCDC66-221ENST00000487739 NAT2P11245 290 aa6.74□□□□□ -1.33
CCDC66-221ENST00000487739 NCAM1P13591 858 aa6.74□□□□□ -1.33
CCDC66-221ENST00000487739 SYN1P17600 705 aa6.74□□□□□ -1.33
CCDC66-221ENST00000487739 TRIM26Q12899 539 aaPredicted RBP6.74□□□□□ -1.33
CCDC66-221ENST00000487739 NETO2Q8NC67 525 aa6.74□□□□□ -1.33
CCDC66-221ENST00000487739 TSPAN17Q96FV3 270 aa6.74□□□□□ -1.33
CCDC66-221ENST00000487739 CCSER2Q9H7U1 834 aa6.74□□□□□ -1.33
CCDC66-221ENST00000487739 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
CCDC66-221ENST00000487739 PLA2G2DQ9UNK4 145 aa6.74□□□□□ -1.33
CCDC66-221ENST00000487739 AKT3Q9Y243 479 aa6.74□□□□□ -1.33
CCDC66-221ENST00000487739 INPP5FQ9Y2H2 1132 aa6.74□□□□□ -1.33
CCDC66-221ENST00000487739 PMF1-BGLAPU3KQ54 211 aa6.74□□□□□ -1.33
CCDC66-221ENST00000487739 FFAR3O14843 346 aa6.73□□□□□ -1.33
CCDC66-221ENST00000487739 ATF2P15336 505 aa6.73□□□□□ -1.33
CCDC66-221ENST00000487739 FOXO4P98177 505 aa6.73□□□□□ -1.33
CCDC66-221ENST00000487739 ERICH6BQ5W0A0 696 aa6.73□□□□□ -1.33
CCDC66-221ENST00000487739 POMZP3Q6PJE2 187 aa6.73□□□□□ -1.33
CCDC66-221ENST00000487739 CPNE8Q86YQ8 564 aa6.73□□□□□ -1.33
CCDC66-221ENST00000487739 FAM169BQ8N8A8 192 aa6.73□□□□□ -1.33
CCDC66-221ENST00000487739 TP53I13Q8NBR0 393 aaPredicted RBP6.73□□□□□ -1.33
CCDC66-221ENST00000487739 CXorf38Q8TB03 319 aa6.73□□□□□ -1.33
CCDC66-221ENST00000487739 PEX11GQ96HA9 241 aa6.73□□□□□ -1.33
CCDC66-221ENST00000487739 KRTAP9-8Q9BYQ0 159 aa6.73□□□□□ -1.33
CCDC66-221ENST00000487739 ACBD3Q9H3P7 528 aa6.73□□□□□ -1.33
CCDC66-221ENST00000487739 GULP1Q9UBP9 304 aa6.73□□□□□ -1.33
CCDC66-221ENST00000487739 ADAMTS20P59510 1910 aa6.72□□□□□ -1.33
CCDC66-221ENST00000487739 NPHS1O60500 1241 aa6.72□□□□□ -1.33
CCDC66-221ENST00000487739 ASGR2P07307 311 aa6.72□□□□□ -1.33
CCDC66-221ENST00000487739 ZNF143P52747 638 aaPredicted RBP6.72□□□□□ -1.33
CCDC66-221ENST00000487739 SLC9A5Q14940 896 aa6.72□□□□□ -1.33
CCDC66-221ENST00000487739 ZDHHC14Q8IZN3 488 aa6.72□□□□□ -1.33
CCDC66-221ENST00000487739 ZNF513Q8N8E2 541 aaPredicted RBP6.72□□□□□ -1.33
CCDC66-221ENST00000487739 SYT8Q8NBV8 401 aa6.72□□□□□ -1.33
CCDC66-221ENST00000487739 FNIP1Q8TF40 1166 aa6.72□□□□□ -1.33
CCDC66-221ENST00000487739 ANAPC16Q96DE5 110 aa6.72□□□□□ -1.33
CCDC66-221ENST00000487739 APBA2Q99767 749 aa6.72□□□□□ -1.33
CCDC66-221ENST00000487739 MTA3Q9BTC8 594 aa6.72□□□□□ -1.33
CCDC66-221ENST00000487739 FBLN5Q9UBX5 448 aa6.72□□□□□ -1.33
CCDC66-221ENST00000487739 APEX2Q9UBZ4 518 aa6.72□□□□□ -1.33
CCDC66-221ENST00000487739 NOP56O00567 594 aaKnown RBP6.71□□□□□ -1.34
CCDC66-221ENST00000487739 KCNH1O95259 989 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 PLA2G1BP04054 148 aaKnown RBP6.71□□□□□ -1.34
CCDC66-221ENST00000487739 PMLP29590 882 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 MC3RP41968 323 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 KCNC1P48547 511 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 NCAPHQ15003 741 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 VWA3BQ502W6 1294 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 WWC2Q6AWC2 1192 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 B3GNT8Q7Z7M8 397 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 BVESQ8NE79 360 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 USP33Q8TEY7 942 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 TEPSINQ96N21 525 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 RXFP1Q9HBX9 757 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.71□□□□□ -1.34
CCDC66-221ENST00000487739 EMC9Q9Y3B6 208 aa6.71□□□□□ -1.34
CCDC66-221ENST00000487739 UNCXA6NJT0 531 aa6.7□□□□□ -1.34
CCDC66-221ENST00000487739 ZBTB7AO95365 584 aa6.7□□□□□ -1.34
CCDC66-221ENST00000487739 SLURP1P55000 103 aa6.7□□□□□ -1.34
CCDC66-221ENST00000487739 HTRA3P83110 453 aa6.7□□□□□ -1.34
CCDC66-221ENST00000487739 SCRN1Q12765 414 aa6.7□□□□□ -1.34
CCDC66-221ENST00000487739 FRMD5Q7Z6J6 570 aa6.7□□□□□ -1.34
CCDC66-221ENST00000487739 COPS5Q92905 334 aa6.7□□□□□ -1.34
CCDC66-221ENST00000487739 CLEC1BQ9P126 229 aa6.7□□□□□ -1.34
CCDC66-221ENST00000487739 C7orf72A4D263 438 aa6.69□□□□□ -1.34
CCDC66-221ENST00000487739 PLS3P13797 630 aa6.69□□□□□ -1.34
CCDC66-221ENST00000487739 LIPIQ6XZB0 460 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms