RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 GOLGA8AA7E2F4 631 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 GOLGA8BA8MQT2 603 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 DNM1LO00429 736 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 CFBP00751 764 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 RPS6KB1P23443 525 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 METAP2P50579 478 aaKnown RBP eCLIP10.82□□□□□ -0.68
LCN2-205ENST00000487719 ALDH5A1P51649 535 aaPredicted RBP10.82□□□□□ -0.68
LCN2-205ENST00000487719 EXOSC10Q01780 885 aaKnown RBP10.82□□□□□ -0.68
LCN2-205ENST00000487719 AKAP17AQ02040 695 aaKnown RBP10.82□□□□□ -0.68
LCN2-205ENST00000487719 CNTN2Q02246 1040 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 ACVR2BQ13705 512 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 ADCK5Q3MIX3 580 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 PRAMEF19Q5SWL8 479 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 APOA5Q6Q788 366 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 Q6ZUG5 572 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 NSUN6Q8TEA1 469 aaKnown RBP10.82□□□□□ -0.68
LCN2-205ENST00000487719 PIBF1Q8WXW3 757 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 PAWRQ96IZ0 340 aaKnown RBP10.82□□□□□ -0.68
LCN2-205ENST00000487719 TCEANC2Q96MN5 208 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 PIGSQ96S52 555 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 USP26Q9BXU7 913 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 C11orf49Q9H6J7 331 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 VTA1Q9NP79 307 aa10.82□□□□□ -0.68
LCN2-205ENST00000487719 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
LCN2-205ENST00000487719 GCOM1H8Y6P7 765 aaPredicted RBP10.81□□□□□ -0.68
LCN2-205ENST00000487719 ZEB2O60315 1214 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 EVI5O60447 810 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 DUSP11O75319 330 aaKnown RBP10.81□□□□□ -0.68
LCN2-205ENST00000487719 POLR2MP0CAP2 368 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 RXRAP19793 462 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 ANAPC15P60006 121 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 CCDC144BQ3MJ40 725 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 BRDTQ58F21 947 aaPredicted RBP10.81□□□□□ -0.68
LCN2-205ENST00000487719 ARHGEF16Q5VV41 709 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 LHX8Q68G74 356 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 CPLX2Q6PUV4 134 aaKnown RBP10.81□□□□□ -0.68
LCN2-205ENST00000487719 SLC30A10Q6XR72 485 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 RUFY3Q7L099 469 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 PCSK9Q8NBP7 692 aaKnown RBP10.81□□□□□ -0.68
LCN2-205ENST00000487719 TRPV1Q8NER1 839 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 CLEC4DQ8WXI8 215 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 BRF1Q92994 677 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 MTMR8Q96EF0 704 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 IWS1Q96ST2 819 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 TM6SF1Q9BZW5 370 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 AP5M1Q9H0R1 490 aa10.81□□□□□ -0.68
LCN2-205ENST00000487719 UPF2Q9HAU5 1272 aaKnown RBP10.81□□□□□ -0.68
LCN2-205ENST00000487719 GPHNQ9NQX3 736 aaPredicted RBP10.81□□□□□ -0.68
LCN2-205ENST00000487719 SOWAHBA6NEL2 793 aa10.8□□□□□ -0.68
LCN2-205ENST00000487719 hCG_1984214I3L0E3 225 aa10.8□□□□□ -0.68
LCN2-205ENST00000487719 SNAI1O95863 264 aaPredicted RBP10.8□□□□□ -0.68
LCN2-205ENST00000487719 IGHA2P01877 340 aa10.8□□□□□ -0.68
LCN2-205ENST00000487719 ZNF865P0CJ78 1059 aaPredicted RBP10.8□□□□□ -0.68
LCN2-205ENST00000487719 TAL1P17542 331 aaPredicted RBP10.8□□□□□ -0.68
LCN2-205ENST00000487719 TNFAIP2Q03169 654 aa10.8□□□□□ -0.68
LCN2-205ENST00000487719 ANO1Q5XXA6 986 aa10.8□□□□□ -0.68
LCN2-205ENST00000487719 IQSEC1Q6DN90 963 aa10.8□□□□□ -0.68
LCN2-205ENST00000487719 TMTC3Q6ZXV5 915 aa10.8□□□□□ -0.68
LCN2-205ENST00000487719 ZNF713Q8N859 430 aaPredicted RBP10.8□□□□□ -0.68
LCN2-205ENST00000487719 SMARCC2Q8TAQ2 1214 aa10.8□□□□□ -0.68
LCN2-205ENST00000487719 CCDC12Q8WUD4 166 aaPredicted RBP10.8□□□□□ -0.68
LCN2-205ENST00000487719 RMDN3Q96TC7 470 aa10.8□□□□□ -0.68
LCN2-205ENST00000487719 GLT8D2Q9H1C3 349 aa10.8□□□□□ -0.68
LCN2-205ENST00000487719 EHMT1Q9H9B1 1298 aa10.8□□□□□ -0.68
LCN2-205ENST00000487719 CPLX1O14810 134 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 NKRFO15226 690 aaKnown RBP eCLIP10.79□□□□□ -0.68
LCN2-205ENST00000487719 PLEKHA8P1O95397 391 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 C6orf222P0C671 652 aaPredicted RBP10.79□□□□□ -0.68
LCN2-205ENST00000487719 APOBRQ0VD83 1088 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 TTLL4Q14679 1199 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 ANKRD1Q15327 319 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 STXBP2Q15833 593 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 PRPF38BQ5VTL8 546 aaKnown RBP10.79□□□□□ -0.68
LCN2-205ENST00000487719 EEPD1Q7L9B9 569 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 HEATR3Q7Z4Q2 680 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 RAB11FIP4Q86YS3 637 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 FBXO16Q8IX29 292 aaPredicted RBP10.79□□□□□ -0.68
LCN2-205ENST00000487719 TRIM22Q8IYM9 498 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 FBXL16Q8N461 479 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 CCDC82Q8N4S0 544 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 DIS3LQ8TF46 1054 aaKnown RBP10.79□□□□□ -0.68
LCN2-205ENST00000487719 SCFD2Q8WU76 684 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 SENP6Q9GZR1 1112 aaPredicted RBP10.79□□□□□ -0.68
LCN2-205ENST00000487719 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 PDRG1Q9NUG6 133 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 PRKAG2Q9UGJ0 569 aa10.79□□□□□ -0.68
LCN2-205ENST00000487719 DOCK5Q9H7D0 1870 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 MOXD2PA6NHM9 499 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 CYTH3O43739 400 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 PGK1P00558 417 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 CPA1P15085 419 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 HSD17B4P51659 736 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 LRRC41Q15345 812 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 GNPTABQ3T906 1256 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 GJC2Q5T442 439 aaPredicted RBP10.78□□□□□ -0.68
LCN2-205ENST00000487719 PPP1R18Q6NYC8 613 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 UBE2Q1Q7Z7E8 422 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 TLK2Q86UE8 772 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 TEX2Q8IWB9 1127 aa10.78□□□□□ -0.68
LCN2-205ENST00000487719 SRBD1Q8N5C6 995 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms