RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 USP25Q9UHP3 1055 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 ABCB11O95342 1321 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 FOXN1O15353 648 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 FOSP01100 380 aaPredicted RBP10.7□□□□□ -0.7
SF3B1-211ENST00000487698 ICAM1P05362 532 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 SLFN14P0C7P3 912 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 USP11P51784 963 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 NT5DC1Q5TFE4 455 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 KANK3Q6NY19 840 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 CCDC174Q6PII3 467 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 MOXD1Q6UVY6 613 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.7□□□□□ -0.7
SF3B1-211ENST00000487698 AK8Q96MA6 479 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 MBOAT7Q96N66 472 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 NAP1L4Q99733 375 aaKnown RBP10.7□□□□□ -0.7
SF3B1-211ENST00000487698 CBX8Q9HC52 389 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 ANO10Q9NW15 660 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 SNCAIPQ9Y6H5 919 aa10.7□□□□□ -0.7
SF3B1-211ENST00000487698 A0A0G2JMZ2 1700 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 CYP3A7-CYP3A51PA0A087WV96 503 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 A0A087WWV3 80 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.69□□□□□ -0.7
SF3B1-211ENST00000487698 C19orf81C9J6K1 198 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 CYP3A7P24462 503 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 SREBF1P36956 1147 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 ZNF165P49910 485 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 FXR2P51116 673 aaKnown RBP eCLIP10.69□□□□□ -0.71e-7■■■□□ 16.1
SF3B1-211ENST00000487698 POSTNQ15063 836 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 KRT26Q7Z3Y9 468 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 LDHDQ86WU2 507 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 IGSF22Q8N9C0 903 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 SPATA20Q8TB22 786 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 DHX58Q96C10 678 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 PDLIM2Q96JY6 352 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 PPP1R9BQ96SB3 815 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 PYM1Q9BRP8 204 aaKnown RBP10.69□□□□□ -0.7
SF3B1-211ENST00000487698 TANGO6Q9C0B7 1094 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 CCSER1Q9C0I3 900 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 RPAP3Q9H6T3 665 aaPredicted RBP10.69□□□□□ -0.7
SF3B1-211ENST00000487698 SLC38A10Q9HBR0 1119 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 PPP1R9AQ9ULJ8 1098 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 ZHX2Q9Y6X8 837 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 POTECB2RU33 542 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 PRR29P0C7W0 189 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 VGLL4Q14135 290 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 IQCB1Q15051 598 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 CALCRLQ16602 461 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 DPCR1Q3MIW9 517 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 PDXDC2PQ6P474 469 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 DDX25Q9UHL0 483 aaKnown RBP10.69□□□□□ -0.7
SF3B1-211ENST00000487698 HOOK1Q9UJC3 728 aaKnown RBP10.69□□□□□ -0.7
SF3B1-211ENST00000487698 MRPL11Q9Y3B7 192 aaKnown RBP10.69□□□□□ -0.7
SF3B1-211ENST00000487698 AFG3L2Q9Y4W6 797 aa10.69□□□□□ -0.7
SF3B1-211ENST00000487698 SPDYE3A6NKU9 549 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 PP2D1A8MPX8 630 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 FLOT1O75955 427 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 CDC25AP30304 524 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 HOXA13P31271 388 aaPredicted RBP10.68□□□□□ -0.7
SF3B1-211ENST00000487698 TXLNAP40222 546 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 SARSP49591 514 aaKnown RBP10.68□□□□□ -0.7
SF3B1-211ENST00000487698 HMGCS2P54868 508 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 NLRP12P59046 1061 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 MAP3K9P80192 1104 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 ARHGAP4P98171 946 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 GHRHRQ02643 423 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 CCDC173Q0VFZ6 552 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 LUZP1Q86V48 1076 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 GRAMD1CQ8IYS0 662 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 CEP57L1Q8IYX8 460 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 IQUBQ8NA54 791 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 HAS1Q92839 578 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 CDCA5Q96FF9 252 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 TAF1DQ9H5J8 278 aaPredicted RBP10.68□□□□□ -0.7
SF3B1-211ENST00000487698 DISC1Q9NRI5 854 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 PCDHA5Q9Y5H7 936 aa10.68□□□□□ -0.7
SF3B1-211ENST00000487698 IQCA1LA6NCM1 817 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 CYP3A4P08684 503 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 CIITAP33076 1130 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 PRKG1Q13976 671 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 KARSQ15046 597 aaKnown RBP10.67□□□□□ -0.7
SF3B1-211ENST00000487698 SH3D19Q5HYK7 790 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 TBC1D5Q92609 795 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 ANP32BQ92688 251 aaKnown RBP10.67□□□□□ -0.7
SF3B1-211ENST00000487698 PAGE5Q96GU1 130 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 AGBL1Q96MI9 1066 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 BPIFA3Q9BQP9 254 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 KCNMB3Q9NPA1 279 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 CCPG1Q9ULG6 757 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 GCOM1H8Y6P7 765 aaPredicted RBP10.67□□□□□ -0.7
SF3B1-211ENST00000487698 BIN1O00499 593 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 PPP1R12BO60237 982 aaPredicted RBP10.67□□□□□ -0.7
SF3B1-211ENST00000487698 POLR2MP0CAP2 368 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 FDX1P10109 184 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 HSD17B4P51659 736 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 Q4G0T1 1027 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 NAALADL2Q58DX5 795 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
SF3B1-211ENST00000487698 LENG9Q96B70 501 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 CCDC34Q96HJ3 373 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 MMTAG2Q9BU76 263 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms