RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 PSMA5P28066 241 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 GSK3AP49840 483 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 PDE4BQ07343 736 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 AKNAD1Q5T1N1 836 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 SAMD5Q5TGI4 173 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 KRT26Q7Z3Y9 468 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 ZFPM1Q8IX07 1006 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 STK11IPQ8N1F8 1099 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 TMEM151AQ8N4L1 468 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 STAG1Q8WVM7 1258 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 SCG3Q8WXD2 468 aaKnown RBP9.03□□□□□ -0.96
GARNL3-218ENST00000487565 KCNB2Q92953 911 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 JAKMIP1Q96N16 626 aaKnown RBP9.03□□□□□ -0.96
GARNL3-218ENST00000487565 PHACTR1Q9C0D0 580 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 TMEM39BQ9GZU3 492 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 DEFB129Q9H1M3 183 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 EHD4Q9H223 541 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 NMRK2Q9NPI5 230 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 GPC6Q9Y625 555 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-218ENST00000487565 TAF6LQ9Y6J9 622 aa9.03□□□□□ -0.96
GARNL3-218ENST00000487565 BAZ2AQ9UIF9 1905 aaKnown RBP9.02□□□□□ -0.97
GARNL3-218ENST00000487565 DDTLA6NHG4 134 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-218ENST00000487565 ADM5C9JUS6 153 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 E7EWF7 191 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 ORC4O43929 436 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 GDF11O95390 407 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 CASTP20810 708 aaKnown RBP9.02□□□□□ -0.97
GARNL3-218ENST00000487565 PLCD1P51178 756 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 RABEP1Q15276 862 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 RRP12Q5JTH9 1297 aaKnown RBP9.02□□□□□ -0.97
GARNL3-218ENST00000487565 C1orf53Q5VUE5 145 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 MFSD6Q6ZSS7 791 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 STOX1Q6ZVD7 989 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 C16orf86Q6ZW13 317 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 LDHDQ86WU2 507 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 ANKMY2Q8IV38 441 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 SLC44A5Q8NCS7 719 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 NCOA7Q8NI08 942 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 EDARADDQ8WWZ3 215 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 HOOK2Q96ED9 719 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 DYNLL2Q96FJ2 89 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 KRT23Q9C075 422 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 RRAGCQ9HB90 399 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 PI4KBQ9UBF8 816 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 SWAP70Q9UH65 585 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 SERPINB13Q9UIV8 391 aa9.02□□□□□ -0.97
GARNL3-218ENST00000487565 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.02□□□□□ -0.97
GARNL3-218ENST00000487565 DNMT3AQ9Y6K1 912 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-218ENST00000487565 MYH1P12882 1939 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 SIPA1L1O43166 1804 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 SSC5DA1L4H1 1573 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 SHISA8B8ZZ34 492 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 SMIM22K7EJ46 135 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 LGR5O75473 907 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 PRDM1O75626 825 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 HMGB1P09429 215 aaKnown RBP9.01□□□□□ -0.97
GARNL3-218ENST00000487565 ARAFP10398 606 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 NT5C2P49902 561 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 DCAF15Q66K64 600 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 BLOC1S2Q6QNY1 142 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 SLCO4C1Q6ZQN7 724 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 C1orf229Q6ZS94 237 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-218ENST00000487565 ESR2Q92731 530 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 IL17RAQ96F46 866 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 NEK1Q96PY6 1258 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 UPF3BQ9BZI7 483 aaKnown RBP9.01□□□□□ -0.97
GARNL3-218ENST00000487565 TM6SF1Q9BZW5 370 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 MKNK2Q9HBH9 465 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 MARK1Q9P0L2 795 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 HERC5Q9UII4 1024 aaKnown RBP9.01□□□□□ -0.97
GARNL3-218ENST00000487565 SCAF8Q9UPN6 1271 aaKnown RBP9.01□□□□□ -0.97
GARNL3-218ENST00000487565 CNTNAP5Q8WYK1 1306 aa9.01□□□□□ -0.97
GARNL3-218ENST00000487565 PHF20L1A8MW92 1017 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 B4E1Z4 1266 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 RANBP6O60518 1105 aaKnown RBP9□□□□□ -0.97
GARNL3-218ENST00000487565 RFX1P22670 979 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 RPS6KB1P23443 525 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 NF2P35240 595 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 CDK8P49336 464 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 GABPAQ06546 454 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 SART3Q15020 963 aaKnown RBP9□□□□□ -0.97
GARNL3-218ENST00000487565 ADCK5Q3MIX3 580 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 SUPT20HL1Q3ZLR7 823 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 KANK3Q6NY19 840 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 MB21D2Q8IYB1 491 aaPredicted RBP9□□□□□ -0.97
GARNL3-218ENST00000487565 BEND7Q8N7W2 519 aaPredicted RBP9□□□□□ -0.97
GARNL3-218ENST00000487565 CDCA5Q96FF9 252 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 TEPSINQ96N21 525 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 UBAC1Q9BSL1 405 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 GLIS2Q9BZE0 524 aaPredicted RBP9□□□□□ -0.97
GARNL3-218ENST00000487565 DNAJC18Q9H819 358 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9□□□□□ -0.97
GARNL3-218ENST00000487565 HCN2Q9UL51 889 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 PRR12Q9ULL5 1215 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 CYP46A1Q9Y6A2 500 aa9□□□□□ -0.97
GARNL3-218ENST00000487565 PLIN4Q96Q06 1357 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 TSPY2A6NKD2 308 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 EFSO43281 561 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 PRC1O43663 620 aa8.99□□□□□ -0.97
GARNL3-218ENST00000487565 FGRP09769 529 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms