RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 FAM109BQ6ICB4 259 aaPredicted RBP6.38□□□□□ -1.39
SF1-217ENST00000486960 NFXL1Q6ZNB6 911 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 OTUD6AQ7L8S5 288 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 SAMD14Q8IZD0 417 aaPredicted RBP6.38□□□□□ -1.39
SF1-217ENST00000486960 TEX9Q8N6V9 391 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 USHBP1Q8N6Y0 703 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 CD99L2Q8TCZ2 262 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 HOOK2Q96ED9 719 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 SMAD5Q99717 465 aaKnown RBP6.38□□□□□ -1.39
SF1-217ENST00000486960 SPON2Q9BUD6 331 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 RTFDC1Q9BY42 306 aaPredicted RBP6.38□□□□□ -1.39
SF1-217ENST00000486960 NIF3L1Q9GZT8 377 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 RASSF1Q9NS23 344 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 GTF2IRD1Q9UHL9 959 aa6.38□□□□□ -1.39
SF1-217ENST00000486960 LUC7L2Q9Y383 392 aaKnown RBP6.38□□□□□ -1.39
SF1-217ENST00000486960 FAM86C2PA6NEL3 165 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 CFAP99D6REC4 459 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 KIF1CO43896 1103 aaKnown RBP6.37□□□□□ -1.39
SF1-217ENST00000486960 RFPL1O75677 317 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 ARIH2O95376 493 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 AGR2O95994 175 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 SETSIPP0DME0 302 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 CPEP16870 476 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 SERPINB3P29508 390 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 CAP2P40123 477 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 IARSP41252 1262 aaKnown RBP6.37□□□□□ -1.39
SF1-217ENST00000486960 FKBP5Q13451 457 aaPredicted RBP6.37□□□□□ -1.39
SF1-217ENST00000486960 PTPN14Q15678 1187 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 C21orf62-AS1Q17RA5 79 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 KIAA1614Q5VZ46 1190 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 SWSAP1Q6NVH7 229 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 ZNF449Q6P9G9 518 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 NYAP1Q6ZVC0 841 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 EEPD1Q7L9B9 569 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 ZBTB46Q86UZ6 589 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 NIM1KQ8IY84 436 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 WDR66Q8TBY9 1149 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 NUP133Q8WUM0 1156 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 ITFG2Q969R8 447 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 CHMP4CQ96CF2 233 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 ANAPC16Q96DE5 110 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 UHRF1Q96T88 793 aaPredicted RBP6.37□□□□□ -1.39
SF1-217ENST00000486960 CFHR5Q9BXR6 569 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 KIAA1586Q9HCI6 787 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 ADARB2Q9NS39 739 aaKnown RBP6.37□□□□□ -1.39
SF1-217ENST00000486960 GPRC5DQ9NZD1 345 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 ZFATQ9P243 1243 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 FBXO10Q9UK96 956 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 NR2E3Q9Y5X4 410 aa6.37□□□□□ -1.39
SF1-217ENST00000486960 SFI1A8K8P3 1242 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 ADM5C9JUS6 153 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 PRPF3O43395 683 aaKnown RBP6.36□□□□□ -1.39
SF1-217ENST00000486960 ST18O60284 1047 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 TMCC2O75069 709 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 CCDC175P0C221 793 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 WEE1P30291 646 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 TM4SF4P48230 202 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 ZNF280AP59817 542 aaPredicted RBP6.36□□□□□ -1.39
SF1-217ENST00000486960 ROR1Q01973 937 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 APBA1Q02410 837 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 PRKG2Q13237 762 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 TAF1CQ15572 869 aaPredicted RBP6.36□□□□□ -1.39
SF1-217ENST00000486960 ELF2Q15723 593 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 PARP10Q53GL7 1025 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 COBLL1Q53SF7 1204 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 TNNI3KQ59H18 835 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 ZC3H12BQ5HYM0 836 aaKnown RBP6.36□□□□□ -1.39
SF1-217ENST00000486960 CCDC102BQ68D86 513 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 CXorf57Q6NSI4 855 aaKnown RBP6.36□□□□□ -1.39
SF1-217ENST00000486960 ZCCHC8Q6NZY4 707 aaKnown RBP6.36□□□□□ -1.39
SF1-217ENST00000486960 CDC37L1Q7L3B6 337 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 ERC1Q8IUD2 1116 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 TDHQ8IZJ6 230 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 UBR7Q8N806 425 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 ZNF713Q8N859 430 aaPredicted RBP6.36□□□□□ -1.39
SF1-217ENST00000486960 KHSRPQ92945 711 aaKnown RBP eCLIP6.36□□□□□ -1.39
SF1-217ENST00000486960 NINJ1Q92982 152 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 GJA10Q969M2 543 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 THAP11Q96EK4 314 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 NELL2Q99435 816 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 FAM167BQ9BTA0 163 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 COMMD8Q9NX08 183 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 DCAF16Q9NXF7 216 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 CABP1Q9NZU7 370 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 RALYQ9UKM9 306 aaKnown RBP6.36□□□□□ -1.39
SF1-217ENST00000486960 MAGED1Q9Y5V3 778 aaPredicted RBP6.36□□□□□ -1.39
SF1-217ENST00000486960 PTCH2Q9Y6C5 1203 aa6.36□□□□□ -1.39
SF1-217ENST00000486960 ASPMQ8IZT6 3477 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 ITIH6Q6UXX5 1313 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 ERICH4A6NGS2 130 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 J3KRW8 73 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 FZD6O60353 706 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 PDE8AO60658 829 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 LGR5O75473 907 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 RAC2P15153 192 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 RXRGP48443 463 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 PLIN5Q00G26 463 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 ITKQ08881 620 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 SLMAPQ14BN4 828 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 MTFR1Q15390 333 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms