RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 NRXN2Q9P2S2 1712 aa20.16■□□□□ 0.82
PDLIM7-207ENST00000486828 BICDL2A1A5D9 508 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 KIF5CO60282 957 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 CCNE1P24864 410 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 KRT9P35527 623 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 FXR2P51116 673 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 ASIC1P78348 528 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 PPP2R3AQ06190 1150 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 CALCRLQ16602 461 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 DUSP9Q99956 384 aaKnown RBP20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 GPCPD1Q9NPB8 672 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 FAM53CQ9NYF3 392 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 PNMA6FA0A0J9YX94 578 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 SHMT1P34896 483 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 TXKP42681 527 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 COBLL1Q53SF7 1204 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 HHIPL2Q6UWX4 724 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 CLEC10AQ8IUN9 316 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 P2RX5Q93086 422 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 IRX2Q9BZI1 471 aaPredicted RBP20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 JMJD4Q9H9V9 463 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 ZNF446Q9NWS9 450 aa20.15■□□□□ 0.82
PDLIM7-207ENST00000486828 A0A0U1RQJ8 604 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 MMP10P09238 476 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 DOK7Q18PE1 504 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 CDC42EP5Q6NZY7 148 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 CSGALNACT2Q8N6G5 542 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 ATRIPQ8WXE1 791 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 MXD3Q9BW11 206 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 LRWD1Q9UFC0 647 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 EDIL3O43854 480 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 SCNN1DP51172 638 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 CLCN6P51797 869 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 STK4Q13043 487 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 GRB10Q13322 594 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 TMEM266Q2M3C6 531 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 ADGRF4Q8IZF3 695 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 ACRBPQ8NEB7 543 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 SLC16A10Q8TF71 515 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 RIC8AQ9NPQ8 531 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 PRDM10Q9NQV6 1147 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 ARGLU1Q9NWB6 273 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 STK17AQ9UEE5 414 aa20.14■□□□□ 0.81
PDLIM7-207ENST00000486828 GREB1LQ9C091 1923 aaPredicted RBP20.13■□□□□ 0.81
PDLIM7-207ENST00000486828 ADAMTSL1Q8N6G6 1762 aa20.13■□□□□ 0.81
PDLIM7-207ENST00000486828 SLC37A4O43826 429 aa20.13■□□□□ 0.81
PDLIM7-207ENST00000486828 HLA-DOAP06340 250 aa20.13■□□□□ 0.81
PDLIM7-207ENST00000486828 ZSCAN20P17040 1043 aaPredicted RBP20.13■□□□□ 0.81
PDLIM7-207ENST00000486828 ALDH1B1P30837 517 aa20.13■□□□□ 0.81
PDLIM7-207ENST00000486828 DNM2P50570 870 aa20.13■□□□□ 0.81
PDLIM7-207ENST00000486828 CNNM4Q6P4Q7 775 aa20.13■□□□□ 0.81
PDLIM7-207ENST00000486828 TEKT1Q969V4 418 aa20.13■□□□□ 0.81
PDLIM7-207ENST00000486828 TTC26A0AVF1 554 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 TDP2O95551 362 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 PDIA5Q14554 519 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 GPATCH4Q5T3I0 446 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 ANKRD40Q6AI12 368 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 APOBEC3HQ6NTF7 200 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 SV2BQ7L1I2 683 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 FAM114A1Q8IWE2 563 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 KRT222Q8N1A0 295 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 OR8K1Q8NGG5 319 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 DNAJC7Q99615 494 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 RAB34Q9BZG1 259 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 BLOC1S4Q9NUP1 217 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 CAPN11Q9UMQ6 739 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 FCER1AP12319 257 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 CLK2P49760 499 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 RSRC2Q7L4I2 434 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 PNMA5Q96PV4 448 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 TUBGCP2Q9BSJ2 902 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 EHD4Q9H223 541 aa20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 LUC7L2Q9Y383 392 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-207ENST00000486828 PES1O00541 588 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-207ENST00000486828 PPP1R11O60927 126 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-207ENST00000486828 ZNF569Q5MCW4 686 aa20.11■□□□□ 0.81
PDLIM7-207ENST00000486828 PPP4R3AQ6IN85 833 aa20.11■□□□□ 0.81
PDLIM7-207ENST00000486828 B4DLN1 442 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 G3V3G9 751 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 PDE6BP35913 854 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 TUBB2AQ13885 445 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 BMS1Q14692 1282 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 DCAF8Q5TAQ9 597 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 TTBK2Q6IQ55 1244 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 GPR161Q8N6U8 529 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 KIAA0895Q8NCT3 520 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 MTMR8Q96EF0 704 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 CDK5RAP3Q96JB5 506 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 CNOT6LQ96LI5 555 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 TUBB2BQ9BVA1 445 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 MYO1AQ9UBC5 1043 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 COL11A2P13942 1736 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 PVALEFA0A1B0GWK0 134 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 ARHGAP25P42331 645 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 TNNI2P48788 182 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 CCDC96Q2M329 555 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 UNC13DQ70J99 1090 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 LARP4BQ92615 738 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 CUL5Q93034 780 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 CCDC17Q96LX7 622 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms