RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.03□□□□□ -1.28
COPS3-209ENST00000486810 PLS3P13797 630 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 SEPHS1P49903 392 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 PPP2R2AP63151 447 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 FAM193AP78312 1265 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 PRSS53Q2L4Q9 553 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 NBPF6Q5VWK0 638 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 DENND5AQ6IQ26 1287 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 IRF2BP1Q8IU81 584 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 CRACR2BQ8N4Y2 399 aaPredicted RBP7.03□□□□□ -1.28
COPS3-209ENST00000486810 NUP43Q8NFH3 380 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 SREK1Q8WXA9 508 aaKnown RBP7.03□□□□□ -1.28
COPS3-209ENST00000486810 C1orf159Q96HA4 380 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 NBPF4Q96M43 638 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 SLC6A17Q9H1V8 727 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 LRP2BPQ9P2M1 347 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 FBLN5Q9UBX5 448 aa7.03□□□□□ -1.28
COPS3-209ENST00000486810 TBC1D8O95759 1140 aa7.02□□□□□ -1.29
COPS3-209ENST00000486810 KRT1P04264 644 aa7.02□□□□□ -1.29
COPS3-209ENST00000486810 SCG5P05408 212 aa7.02□□□□□ -1.29
COPS3-209ENST00000486810 ERVFRD-1P60508 538 aa7.02□□□□□ -1.29
COPS3-209ENST00000486810 LAPTM5Q13571 262 aa7.02□□□□□ -1.29
COPS3-209ENST00000486810 SF3A1Q15459 793 aaKnown RBP7.02□□□□□ -1.29
COPS3-209ENST00000486810 INF2Q27J81 1249 aa7.02□□□□□ -1.29
COPS3-209ENST00000486810 SPATC1Q76KD6 591 aa7.02□□□□□ -1.29
COPS3-209ENST00000486810 CCDC103Q8IW40 242 aa7.02□□□□□ -1.29
COPS3-209ENST00000486810 ST13P5Q8NFI4 369 aaPredicted RBP7.02□□□□□ -1.29
COPS3-209ENST00000486810 NLGN2Q8NFZ4 835 aa7.02□□□□□ -1.29
COPS3-209ENST00000486810 KRTAP4-12Q9BQ66 201 aa7.02□□□□□ -1.29
COPS3-209ENST00000486810 HIRIP3Q9BW71 556 aaPredicted RBP7.02□□□□□ -1.29
COPS3-209ENST00000486810 TNFRSF12AQ9NP84 129 aa7.02□□□□□ -1.29
COPS3-209ENST00000486810 USP35Q9P2H5 1018 aa7.02□□□□□ -1.29
COPS3-209ENST00000486810 MYOCOSA0A1B0GUC4 107 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 FAM221BA6H8Z2 402 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 PAMP19021 973 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 HOXC12P31275 282 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 L1CAMP32004 1257 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 GFRA1P56159 465 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 CYP4F8P98187 520 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 RASA3Q14644 834 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 ADGRF1Q5T601 910 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 TMED8Q6PL24 325 aaPredicted RBP7.01□□□□□ -1.29
COPS3-209ENST00000486810 KRTAP19-1Q8IUB9 90 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 KSR1Q8IVT5 923 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 CCDC113Q9H0I3 377 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 ZNF552Q9H707 407 aaPredicted RBP7.01□□□□□ -1.29
COPS3-209ENST00000486810 ARHGEF4Q9NR80 690 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 SIRPGQ9P1W8 387 aa7.01□□□□□ -1.29
COPS3-209ENST00000486810 PPP1R1BQ9UD71 204 aaPredicted RBP7.01□□□□□ -1.29
COPS3-209ENST00000486810 NPHP3-ACAD11A0A0J9YXS1 232 aa7□□□□□ -1.29
COPS3-209ENST00000486810 KRTAP9-6A0A140TA67 174 aa7□□□□□ -1.29
COPS3-209ENST00000486810 C7orf72A4D263 438 aa7□□□□□ -1.29
COPS3-209ENST00000486810 PDPK1O15530 556 aa7□□□□□ -1.29
COPS3-209ENST00000486810 PDE6BP35913 854 aa7□□□□□ -1.29
COPS3-209ENST00000486810 TXKP42681 527 aa7□□□□□ -1.29
COPS3-209ENST00000486810 RASGRF1Q13972 1273 aa7□□□□□ -1.29
COPS3-209ENST00000486810 JAMLQ86YT9 394 aa7□□□□□ -1.29
COPS3-209ENST00000486810 TMEM145Q8NBT3 493 aa7□□□□□ -1.29
COPS3-209ENST00000486810 DPF3Q92784 378 aa7□□□□□ -1.29
COPS3-209ENST00000486810 MMP19Q99542 508 aa7□□□□□ -1.29
COPS3-209ENST00000486810 MTA3Q9BTC8 594 aa7□□□□□ -1.29
COPS3-209ENST00000486810 MCOLN1Q9GZU1 580 aa7□□□□□ -1.29
COPS3-209ENST00000486810 EPB41L4BQ9H329 900 aa7□□□□□ -1.29
COPS3-209ENST00000486810 DCP1AQ9NPI6 582 aaPredicted RBP7□□□□□ -1.29
COPS3-209ENST00000486810 KLHL14Q9P2G3 628 aa7□□□□□ -1.29
COPS3-209ENST00000486810 CCDC85CA6NKD9 419 aa6.99□□□□□ -1.29
COPS3-209ENST00000486810 FARP2O94887 1054 aaPredicted RBP6.99□□□□□ -1.29
COPS3-209ENST00000486810 SNRPB2P08579 225 aaKnown RBP6.99□□□□□ -1.29
COPS3-209ENST00000486810 TACR1P25103 407 aa6.99□□□□□ -1.29
COPS3-209ENST00000486810 ECI1P42126 302 aa6.99□□□□□ -1.29
COPS3-209ENST00000486810 CORO7P57737 925 aa6.99□□□□□ -1.29
COPS3-209ENST00000486810 SLC35F1Q5T1Q4 408 aa6.99□□□□□ -1.29
COPS3-209ENST00000486810 FAM43BQ6ZT52 329 aaPredicted RBP6.99□□□□□ -1.29
COPS3-209ENST00000486810 ZNF605Q86T29 641 aa6.99□□□□□ -1.29
COPS3-209ENST00000486810 CERS3Q8IU89 383 aa6.99□□□□□ -1.29
COPS3-209ENST00000486810 PMFBP1Q8TBY8 1022 aa6.99□□□□□ -1.29
COPS3-209ENST00000486810 TRIM44Q96DX7 344 aaPredicted RBP6.99□□□□□ -1.29
COPS3-209ENST00000486810 SGSM3Q96HU1 749 aa6.99□□□□□ -1.29
COPS3-209ENST00000486810 PRDM16Q9HAZ2 1276 aa6.99□□□□□ -1.29
COPS3-209ENST00000486810 GULP1Q9UBP9 304 aa6.99□□□□□ -1.29
COPS3-209ENST00000486810 OR14I1A6ND48 311 aa6.98□□□□□ -1.29
COPS3-209ENST00000486810 ADCY3O60266 1144 aa6.98□□□□□ -1.29
COPS3-209ENST00000486810 DLX3O60479 287 aa6.98□□□□□ -1.29
COPS3-209ENST00000486810 DIAPH1O60610 1272 aaKnown RBP6.98□□□□□ -1.29
COPS3-209ENST00000486810 HSP90AA1P07900 732 aaKnown RBP6.98□□□□□ -1.29
COPS3-209ENST00000486810 ANAPC15P60006 121 aa6.98□□□□□ -1.29
COPS3-209ENST00000486810 YBX1P67809 324 aaKnown RBP6.98□□□□□ -1.29
COPS3-209ENST00000486810 TESK1Q15569 626 aa6.98□□□□□ -1.29
COPS3-209ENST00000486810 YOD1Q5VVQ6 348 aaPredicted RBP6.98□□□□□ -1.29
COPS3-209ENST00000486810 FBXO15Q8NCQ5 510 aaPredicted RBP6.98□□□□□ -1.29
COPS3-209ENST00000486810 FAM84AQ96KN4 292 aa6.98□□□□□ -1.29
COPS3-209ENST00000486810 IER2Q9BTL4 223 aa6.98□□□□□ -1.29
COPS3-209ENST00000486810 PDCL3Q9H2J4 239 aa6.98□□□□□ -1.29
COPS3-209ENST00000486810 PDLIM7Q9NR12 457 aa6.98□□□□□ -1.29
COPS3-209ENST00000486810 SNTG2Q9NY99 539 aa6.98□□□□□ -1.29
COPS3-209ENST00000486810 RWDD3Q9Y3V2 267 aa6.98□□□□□ -1.29
COPS3-209ENST00000486810 U2SURPO15042 1029 aaKnown RBP6.97□□□□□ -1.29
COPS3-209ENST00000486810 C8AP07357 584 aa6.97□□□□□ -1.29
COPS3-209ENST00000486810 DBHP09172 617 aa6.97□□□□□ -1.29
COPS3-209ENST00000486810 LCP1P13796 627 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms