RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 PTPDC1A2A3K4 754 aa22.1■■□□□ 1.13
GMDS-205ENST00000486793 HSPD1P10809 573 aaKnown RBP22.1■■□□□ 1.13
GMDS-205ENST00000486793 ALDH5A1P51649 535 aaPredicted RBP22.1■■□□□ 1.13
GMDS-205ENST00000486793 RRP1P56182 461 aaKnown RBP22.1■■□□□ 1.13
GMDS-205ENST00000486793 CLEC4DQ8WXI8 215 aa22.1■■□□□ 1.13
GMDS-205ENST00000486793 PPM1EQ8WY54 764 aa22.1■■□□□ 1.13
GMDS-205ENST00000486793 SYMPKQ92797 1274 aaKnown RBP22.1■■□□□ 1.13
GMDS-205ENST00000486793 CRBNQ96SW2 442 aa22.1■■□□□ 1.13
GMDS-205ENST00000486793 GAS2L1Q99501 681 aaPredicted RBP22.1■■□□□ 1.13
GMDS-205ENST00000486793 CHD9Q3L8U1 2897 aa22.09■■□□□ 1.13
GMDS-205ENST00000486793 CALML3P27482 149 aa22.09■■□□□ 1.13
GMDS-205ENST00000486793 HAND2P61296 217 aa22.09■■□□□ 1.13
GMDS-205ENST00000486793 RAB30Q15771 203 aa22.09■■□□□ 1.13
GMDS-205ENST00000486793 ZNF589Q86UQ0 364 aaPredicted RBP22.09■■□□□ 1.13
GMDS-205ENST00000486793 WNT8AQ9H1J5 351 aa22.09■■□□□ 1.13
GMDS-205ENST00000486793 ALDH8A1Q9H2A2 487 aaPredicted RBP22.09■■□□□ 1.13
GMDS-205ENST00000486793 MTIF3Q9H2K0 278 aaKnown RBP22.09■■□□□ 1.13
GMDS-205ENST00000486793 RBM47A0AV96 593 aaKnown RBP22.08■■□□□ 1.13
GMDS-205ENST00000486793 PDHBP11177 359 aa22.08■■□□□ 1.13
GMDS-205ENST00000486793 NMIQ13287 307 aaPredicted RBP22.08■■□□□ 1.13
GMDS-205ENST00000486793 HDAC1Q13547 482 aaPredicted RBP22.08■■□□□ 1.13
GMDS-205ENST00000486793 SLC30A10Q6XR72 485 aa22.08■■□□□ 1.13
GMDS-205ENST00000486793 TTC14Q96N46 770 aa22.08■■□□□ 1.13
GMDS-205ENST00000486793 NKX2-4Q9H2Z4 354 aa22.08■■□□□ 1.13
GMDS-205ENST00000486793 PRDM6Q9NQX0 595 aa22.08■■□□□ 1.13
GMDS-205ENST00000486793 LOC102724159A0A0B4J2E5 919 aa22.07■■□□□ 1.12
GMDS-205ENST00000486793 ZNF543Q08ER8 600 aa22.07■■□□□ 1.12
GMDS-205ENST00000486793 ADGRE1Q14246 886 aa22.07■■□□□ 1.12
GMDS-205ENST00000486793 PWP2Q15269 919 aaKnown RBP22.07■■□□□ 1.12
GMDS-205ENST00000486793 RNF207Q6ZRF8 634 aa22.07■■□□□ 1.12
GMDS-205ENST00000486793 MFSD6Q6ZSS7 791 aa22.07■■□□□ 1.12
GMDS-205ENST00000486793 TICAM2Q86XR7 235 aa22.07■■□□□ 1.12
GMDS-205ENST00000486793 RPUSD2Q8IZ73 545 aaKnown RBP22.07■■□□□ 1.12
GMDS-205ENST00000486793 VWCEQ96DN2 955 aa22.07■■□□□ 1.12
GMDS-205ENST00000486793 SCLYQ96I15 445 aa22.07■■□□□ 1.12
GMDS-205ENST00000486793 TRMT13Q9NUP7 481 aaKnown RBP22.07■■□□□ 1.12
GMDS-205ENST00000486793 POLR3EQ9NVU0 708 aa22.07■■□□□ 1.12
GMDS-205ENST00000486793 YBX2Q9Y2T7 364 aaKnown RBP22.07■■□□□ 1.12
GMDS-205ENST00000486793 MYL3P08590 195 aa22.06■■□□□ 1.12
GMDS-205ENST00000486793 CYP2C9P11712 490 aa22.06■■□□□ 1.12
GMDS-205ENST00000486793 PURAQ00577 322 aaKnown RBP22.06■■□□□ 1.12
GMDS-205ENST00000486793 TJAP1Q5JTD0 557 aa22.06■■□□□ 1.12
GMDS-205ENST00000486793 AKNAD1Q5T1N1 836 aa22.06■■□□□ 1.12
GMDS-205ENST00000486793 SLC28A3Q9HAS3 691 aa22.06■■□□□ 1.12
GMDS-205ENST00000486793 MCM3APO60318 1980 aa22.05■■□□□ 1.12
GMDS-205ENST00000486793 TRIM6-TRIM34B2RNG4 842 aa22.05■■□□□ 1.12
GMDS-205ENST00000486793 SUPT20HL2P0C7V6 817 aa22.05■■□□□ 1.12
GMDS-205ENST00000486793 SNHG28P0DPA3 235 aa22.05■■□□□ 1.12
GMDS-205ENST00000486793 CPT1AP50416 773 aa22.05■■□□□ 1.12
GMDS-205ENST00000486793 RPS6P62753 249 aaKnown RBP22.05■■□□□ 1.12
GMDS-205ENST00000486793 PDE4DQ08499 809 aa22.05■■□□□ 1.12
GMDS-205ENST00000486793 OR6J1Q8NGC5 347 aa22.05■■□□□ 1.12
GMDS-205ENST00000486793 GPHNQ9NQX3 736 aaPredicted RBP22.05■■□□□ 1.12
GMDS-205ENST00000486793 PNMA2Q9UL42 364 aa22.05■■□□□ 1.12
GMDS-205ENST00000486793 SLC4A7Q9Y6M7 1214 aa22.05■■□□□ 1.12
GMDS-205ENST00000486793 ZMYM6O95789 1325 aa22.05■■□□□ 1.12
GMDS-205ENST00000486793 IGFBP4P22692 258 aa22.04■■□□□ 1.12
GMDS-205ENST00000486793 RABGGTBP53611 331 aa22.04■■□□□ 1.12
GMDS-205ENST00000486793 TBC1D10CQ8IV04 446 aa22.04■■□□□ 1.12
GMDS-205ENST00000486793 RILPL2Q969X0 211 aa22.04■■□□□ 1.12
GMDS-205ENST00000486793 MTG1Q9BT17 334 aaPredicted RBP22.04■■□□□ 1.12
GMDS-205ENST00000486793 LNPKQ9C0E8 428 aa22.04■■□□□ 1.12
GMDS-205ENST00000486793 TNKSO95271 1327 aa22.04■■□□□ 1.12
GMDS-205ENST00000486793 CCDC171Q6TFL3 1326 aa22.04■■□□□ 1.12
GMDS-205ENST00000486793 GOLGA8HP0CJ92 632 aa22.03■■□□□ 1.12
GMDS-205ENST00000486793 PCP11498 1178 aaKnown RBP22.03■■□□□ 1.12
GMDS-205ENST00000486793 EDNRBP24530 442 aa22.03■■□□□ 1.12
GMDS-205ENST00000486793 CCDC85BQ15834 202 aaPredicted RBP22.03■■□□□ 1.12
GMDS-205ENST00000486793 NBPF20Q3BBV1 942 aa22.03■■□□□ 1.12
GMDS-205ENST00000486793 PPP1R13LQ8WUF5 828 aa22.03■■□□□ 1.12
GMDS-205ENST00000486793 ZKSCAN3Q9BRR0 538 aa22.03■■□□□ 1.12
GMDS-205ENST00000486793 A6NJR5 290 aa22.02■■□□□ 1.12
GMDS-205ENST00000486793 ZBBXA8MT70 800 aa22.02■■□□□ 1.12
GMDS-205ENST00000486793 MYOGP15173 224 aa22.02■■□□□ 1.12
GMDS-205ENST00000486793 PPP2R5BQ15173 497 aa22.02■■□□□ 1.12
GMDS-205ENST00000486793 BRDTQ58F21 947 aaPredicted RBP22.02■■□□□ 1.12
GMDS-205ENST00000486793 FAM47CQ5HY64 1035 aa22.02■■□□□ 1.12
GMDS-205ENST00000486793 DNERQ8NFT8 737 aa22.02■■□□□ 1.12
GMDS-205ENST00000486793 SCFD2Q8WU76 684 aa22.02■■□□□ 1.12
GMDS-205ENST00000486793 COPS5Q92905 334 aa22.02■■□□□ 1.12
GMDS-205ENST00000486793 MPHOSPH6Q99547 160 aaKnown RBP22.02■■□□□ 1.12
GMDS-205ENST00000486793 UBA5Q9GZZ9 404 aa22.02■■□□□ 1.12
GMDS-205ENST00000486793 CPVLQ9H3G5 476 aa22.02■■□□□ 1.12
GMDS-205ENST00000486793 RNF41Q9H4P4 317 aaPredicted RBP22.02■■□□□ 1.12
GMDS-205ENST00000486793 WDR19Q8NEZ3 1342 aa22.02■■□□□ 1.12
GMDS-205ENST00000486793 NKRFO15226 690 aaKnown RBP eCLIP22.01■■□□□ 1.11
GMDS-205ENST00000486793 TXNP10599 105 aaKnown RBP22.01■■□□□ 1.11
GMDS-205ENST00000486793 SDSP20132 328 aa22.01■■□□□ 1.11
GMDS-205ENST00000486793 TTLL4Q14679 1199 aa22.01■■□□□ 1.11
GMDS-205ENST00000486793 DEFB128Q7Z7B8 93 aa22.01■■□□□ 1.11
GMDS-205ENST00000486793 RGS22Q8NE09 1264 aa22.01■■□□□ 1.11
GMDS-205ENST00000486793 ESR2Q92731 530 aa22.01■■□□□ 1.11
GMDS-205ENST00000486793 MUC3AQ02505 3323 aa22■■□□□ 1.11
GMDS-205ENST00000486793 ZNF213O14771 459 aa22■■□□□ 1.11
GMDS-205ENST00000486793 KPNA6O60684 536 aa22■■□□□ 1.11
GMDS-205ENST00000486793 ATP2A2P16615 1042 aaKnown RBP22■■□□□ 1.11
GMDS-205ENST00000486793 USH1GQ495M9 461 aa22■■□□□ 1.11
GMDS-205ENST00000486793 GPATCH4Q5T3I0 446 aaKnown RBP22■■□□□ 1.11
GMDS-205ENST00000486793 B4GALNT3Q6L9W6 998 aa22■■□□□ 1.11
GMDS-205ENST00000486793 DGKHQ86XP1 1220 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms