RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 FEZF2Q8TBJ5 459 aa7.04□□□□□ -1.28
SMC4-218ENST00000486711 HAUS7Q99871 368 aa7.04□□□□□ -1.28
SMC4-218ENST00000486711 GBP3Q9H0R5 595 aa7.04□□□□□ -1.28
SMC4-218ENST00000486711 PHAXQ9H814 394 aaKnown RBP7.04□□□□□ -1.28
SMC4-218ENST00000486711 GINM1Q9NU53 330 aa7.04□□□□□ -1.28
SMC4-218ENST00000486711 LTBP3Q9NS15 1303 aa7.03□□□□□ -1.28
SMC4-218ENST00000486711 LIMS1P48059 325 aa7.03□□□□□ -1.28
SMC4-218ENST00000486711 EIF6P56537 245 aaKnown RBP7.03□□□□□ -1.28
SMC4-218ENST00000486711 PPP2R5DQ14738 602 aa7.03□□□□□ -1.28
SMC4-218ENST00000486711 GNPTABQ3T906 1256 aa7.03□□□□□ -1.28
SMC4-218ENST00000486711 RCSD1Q6JBY9 416 aa7.03□□□□□ -1.28
SMC4-218ENST00000486711 C19orf47Q8N9M1 422 aaKnown RBP7.03□□□□□ -1.28
SMC4-218ENST00000486711 OR6P1Q8NGX9 317 aa7.03□□□□□ -1.28
SMC4-218ENST00000486711 GMLQ99445 158 aa7.03□□□□□ -1.28
SMC4-218ENST00000486711 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.03□□□□□ -1.284e-6■□□□□ 10.1
SMC4-218ENST00000486711 DBR1Q9UK59 544 aaKnown RBP7.03□□□□□ -1.28
SMC4-218ENST00000486711 FBLN1P23142 703 aa7.02□□□□□ -1.29
SMC4-218ENST00000486711 TACR1P25103 407 aa7.02□□□□□ -1.29
SMC4-218ENST00000486711 SOX9P48436 509 aa7.02□□□□□ -1.29
SMC4-218ENST00000486711 EEF1DP3Q658K8 133 aa7.02□□□□□ -1.29
SMC4-218ENST00000486711 HEATR6Q6AI08 1181 aaKnown RBP7.02□□□□□ -1.29
SMC4-218ENST00000486711 RASGRP4Q8TDF6 673 aa7.02□□□□□ -1.29
SMC4-218ENST00000486711 KRTAP9-3Q9BYQ3 159 aa7.02□□□□□ -1.29
SMC4-218ENST00000486711 RNF38Q9H0F5 515 aa7.02□□□□□ -1.29
SMC4-218ENST00000486711 KLHL25Q9H0H3 589 aa7.02□□□□□ -1.29
SMC4-218ENST00000486711 ZC3H12DA2A288 527 aaKnown RBP7.01□□□□□ -1.29
SMC4-218ENST00000486711 F8W031 263 aaPredicted RBP7.01□□□□□ -1.29
SMC4-218ENST00000486711 ATF4P18848 351 aaPredicted RBP7.01□□□□□ -1.29
SMC4-218ENST00000486711 CABP7Q86V35 215 aa7.01□□□□□ -1.29
SMC4-218ENST00000486711 ZDHHC14Q8IZN3 488 aa7.01□□□□□ -1.29
SMC4-218ENST00000486711 SYT8Q8NBV8 401 aa7.01□□□□□ -1.29
SMC4-218ENST00000486711 ADCY4Q8NFM4 1077 aa7.01□□□□□ -1.29
SMC4-218ENST00000486711 SEC16BQ96JE7 1060 aa7.01□□□□□ -1.29
SMC4-218ENST00000486711 TEPSINQ96N21 525 aa7.01□□□□□ -1.29
SMC4-218ENST00000486711 EFR3BQ9Y2G0 817 aa7.01□□□□□ -1.29
SMC4-218ENST00000486711 HCFC2Q9Y5Z7 792 aa7.01□□□□□ -1.29
SMC4-218ENST00000486711 AURKAO14965 403 aa7□□□□□ -1.29
SMC4-218ENST00000486711 PPM1BO75688 479 aa7□□□□□ -1.29
SMC4-218ENST00000486711 SSBP05455 408 aaKnown RBP eCLIP7□□□□□ -1.29
SMC4-218ENST00000486711 GTF2F1P35269 517 aaKnown RBP eCLIP7□□□□□ -1.29
SMC4-218ENST00000486711 GIPRP48546 466 aa7□□□□□ -1.29
SMC4-218ENST00000486711 PRR5P85299 388 aa7□□□□□ -1.29
SMC4-218ENST00000486711 RBM10P98175 930 aaKnown RBP7□□□□□ -1.29
SMC4-218ENST00000486711 SLC7A5Q01650 507 aa7□□□□□ -1.29
SMC4-218ENST00000486711 TP53I13Q8NBR0 393 aaPredicted RBP7□□□□□ -1.29
SMC4-218ENST00000486711 ARMC5Q96C12 935 aa7□□□□□ -1.29
SMC4-218ENST00000486711 FAN1Q9Y2M0 1017 aa7□□□□□ -1.29
SMC4-218ENST00000486711 STXBP3O00186 592 aa6.99□□□□□ -1.29
SMC4-218ENST00000486711 FFAR3O14843 346 aa6.99□□□□□ -1.29
SMC4-218ENST00000486711 GLI4P10075 376 aa6.99□□□□□ -1.29
SMC4-218ENST00000486711 NCAM1P13591 858 aa6.99□□□□□ -1.29
SMC4-218ENST00000486711 FOXO4P98177 505 aa6.99□□□□□ -1.29
SMC4-218ENST00000486711 FRMD5Q7Z6J6 570 aa6.99□□□□□ -1.29
SMC4-218ENST00000486711 ADAT2Q7Z6V5 191 aaKnown RBP6.99□□□□□ -1.29
SMC4-218ENST00000486711 BACE2Q9Y5Z0 518 aa6.99□□□□□ -1.29
SMC4-218ENST00000486711 PMF1-BGLAPU3KQ54 211 aa6.99□□□□□ -1.29
SMC4-218ENST00000486711 A0A1W2PQH9 124 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 STK10O94804 968 aaKnown RBP6.98□□□□□ -1.29
SMC4-218ENST00000486711 EPHX1P07099 455 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 CELA3BP08861 270 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 KCNC1P48547 511 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 NASPP49321 788 aaPredicted RBP6.98□□□□□ -1.29
SMC4-218ENST00000486711 SEPHS1P49903 392 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 AMPD2Q01433 879 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 GRB10Q13322 594 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 CPLX3Q8WVH0 158 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 ALG3Q92685 438 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 MCMBPQ9BTE3 642 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 CGGBP1Q9UFW8 167 aaPredicted RBP6.98□□□□□ -1.29
SMC4-218ENST00000486711 SUSD2Q9UGT4 822 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 NUDT5Q9UKK9 219 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 STRIP2Q9ULQ0 834 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 PCDHB10Q9UN67 800 aa6.98□□□□□ -1.29
SMC4-218ENST00000486711 TRBV23OR9-2A0A075B6M9 112 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 VAMP4O75379 141 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 PLA2G1BP04054 148 aaKnown RBP6.97□□□□□ -1.29
SMC4-218ENST00000486711 FGRP09769 529 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 ATF2P15336 505 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 SLURP1P55000 103 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 DPY19L1Q2PZI1 675 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 SKOR2Q2VWA4 1001 aaPredicted RBP6.97□□□□□ -1.29
SMC4-218ENST00000486711 VWA3BQ502W6 1294 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 MCF2L2Q86YR7 1114 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 LZTR1Q8N653 840 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 NETO2Q8NC67 525 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 FNIP1Q8TF40 1166 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 TSPAN17Q96FV3 270 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 RCC1LQ96I51 464 aaKnown RBP6.97□□□□□ -1.29
SMC4-218ENST00000486711 FGD4Q96M96 766 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 HIRIP3Q9BW71 556 aaPredicted RBP6.97□□□□□ -1.29
SMC4-218ENST00000486711 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
SMC4-218ENST00000486711 C2orf71A6NGG8 1288 aa6.96□□□□□ -1.3
SMC4-218ENST00000486711 ASGR2P07307 311 aa6.96□□□□□ -1.3
SMC4-218ENST00000486711 HTRA3P83110 453 aa6.96□□□□□ -1.3
SMC4-218ENST00000486711 LIPIQ6XZB0 460 aa6.96□□□□□ -1.3
SMC4-218ENST00000486711 ARHGEF39Q8N4T4 335 aa6.96□□□□□ -1.3
SMC4-218ENST00000486711 KLHL6Q8WZ60 621 aa6.96□□□□□ -1.3
SMC4-218ENST00000486711 PEX11GQ96HA9 241 aa6.96□□□□□ -1.3
SMC4-218ENST00000486711 ADAM7Q9H2U9 754 aa6.96□□□□□ -1.3
SMC4-218ENST00000486711 SUGT1Q9Y2Z0 365 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms