RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CLEC4DQ8WXI8 215 aa14.71□□□□□ -0.05
HDAC6-229ENST00000486665 TBC1D5Q92609 795 aa14.71□□□□□ -0.05
HDAC6-229ENST00000486665 C8orf76Q96K31 380 aa14.71□□□□□ -0.05
HDAC6-229ENST00000486665 MOV10L1Q9BXT6 1211 aaKnown RBP14.71□□□□□ -0.05
HDAC6-229ENST00000486665 TEX13BQ9BXU2 312 aa14.71□□□□□ -0.05
HDAC6-229ENST00000486665 PRO3102Q9H379 93 aa14.71□□□□□ -0.05
HDAC6-229ENST00000486665 CWC22Q9HCG8 908 aaKnown RBP14.71□□□□□ -0.05
HDAC6-229ENST00000486665 MORF4L1Q9UBU8 362 aa14.71□□□□□ -0.05
HDAC6-229ENST00000486665 PLXNB2O15031 1838 aa14.71□□□□□ -0.06
HDAC6-229ENST00000486665 ABCB11O95342 1321 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 SMCO2A6NFE2 343 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 OPLAHO14841 1288 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 INHAP05111 366 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 SYT1P21579 422 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 NAPAP54920 295 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 KRT40Q6A162 431 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 RIOX2Q8IUF8 465 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 SLAIN1Q8ND83 568 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 FBXO18Q8NFZ0 1043 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 TRERF1Q96PN7 1200 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 SH3GLB2Q9NR46 395 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 HOMER2Q9NSB8 354 aa14.7□□□□□ -0.06
HDAC6-229ENST00000486665 A0A0G2JMZ2 1700 aa14.69□□□□□ -0.06
HDAC6-229ENST00000486665 hCG_1984214I3L0E3 225 aa14.69□□□□□ -0.06
HDAC6-229ENST00000486665 FARP2O94887 1054 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-229ENST00000486665 SGPL1O95470 568 aa14.69□□□□□ -0.06
HDAC6-229ENST00000486665 DDIT3P35638 169 aa14.69□□□□□ -0.06
HDAC6-229ENST00000486665 NLRP5P59047 1200 aa14.69□□□□□ -0.06
HDAC6-229ENST00000486665 UBXN2AP68543 259 aa14.69□□□□□ -0.06
HDAC6-229ENST00000486665 NPY5RQ15761 445 aa14.69□□□□□ -0.06
HDAC6-229ENST00000486665 ZNF713Q8N859 430 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-229ENST00000486665 PHF20Q9BVI0 1012 aa14.69□□□□□ -0.06
HDAC6-229ENST00000486665 PORCNQ9H237 461 aa14.69□□□□□ -0.06
HDAC6-229ENST00000486665 RNF146Q9NTX7 359 aa14.69□□□□□ -0.06
HDAC6-229ENST00000486665 MRPL11Q9Y3B7 192 aaKnown RBP14.69□□□□□ -0.06
HDAC6-229ENST00000486665 KIF3AQ9Y496 699 aa14.69□□□□□ -0.06
HDAC6-229ENST00000486665 NFIBO00712 420 aa14.68□□□□□ -0.06
HDAC6-229ENST00000486665 TNPO2O14787 897 aaKnown RBP14.68□□□□□ -0.06
HDAC6-229ENST00000486665 ERCC3P19447 782 aa14.68□□□□□ -0.06
HDAC6-229ENST00000486665 TRAF1Q13077 416 aa14.68□□□□□ -0.06
HDAC6-229ENST00000486665 PKP1Q13835 747 aa14.68□□□□□ -0.06
HDAC6-229ENST00000486665 FAM110CQ1W6H9 321 aa14.68□□□□□ -0.06
HDAC6-229ENST00000486665 TKFCQ3LXA3 575 aa14.68□□□□□ -0.06
HDAC6-229ENST00000486665 PPP1R18Q6NYC8 613 aa14.68□□□□□ -0.06
HDAC6-229ENST00000486665 NCAPG2Q86XI2 1143 aa14.68□□□□□ -0.06
HDAC6-229ENST00000486665 OXER1Q8TDS5 423 aa14.68□□□□□ -0.06
HDAC6-229ENST00000486665 ZMYND12Q9H0C1 365 aa14.68□□□□□ -0.06
HDAC6-229ENST00000486665 PNMA2Q9UL42 364 aa14.68□□□□□ -0.06
HDAC6-229ENST00000486665 COL11A1P12107 1806 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-229ENST00000486665 SMCHD1A6NHR9 2005 aa14.68□□□□□ -0.06
HDAC6-229ENST00000486665 SLC25A27O95847 323 aa14.67□□□□□ -0.06
HDAC6-229ENST00000486665 XBP1P17861 261 aa14.67□□□□□ -0.06
HDAC6-229ENST00000486665 PDCP20941 246 aa14.67□□□□□ -0.06
HDAC6-229ENST00000486665 ADCY7P51828 1080 aa14.67□□□□□ -0.06
HDAC6-229ENST00000486665 TRIM29Q14134 588 aa14.67□□□□□ -0.06
HDAC6-229ENST00000486665 UBE2SQ16763 222 aa14.67□□□□□ -0.06
HDAC6-229ENST00000486665 CHST13Q8NET6 341 aa14.67□□□□□ -0.06
HDAC6-229ENST00000486665 DEFB118Q96PH6 123 aa14.67□□□□□ -0.06
HDAC6-229ENST00000486665 PSTPIP2Q9H939 334 aa14.67□□□□□ -0.06
HDAC6-229ENST00000486665 RIC8AQ9NPQ8 531 aa14.67□□□□□ -0.06
HDAC6-229ENST00000486665 PCDHA4Q9UN74 947 aa14.67□□□□□ -0.06
HDAC6-229ENST00000486665 MTMR6Q9Y217 621 aa14.67□□□□□ -0.06
HDAC6-229ENST00000486665 ESYT2A0FGR8 921 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 VPS37CA5D8V6 355 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-229ENST00000486665 BTBD18B2RXH4 712 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 H3BQV1 296 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 MEIS2O14770 477 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 STX6O43752 255 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 MMP1P03956 469 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 MRPL12P52815 198 aaKnown RBP14.66□□□□□ -0.06
HDAC6-229ENST00000486665 TRIM32Q13049 653 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 IRF5Q13568 498 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 USP17L6PQ6QN14 398 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 BLIDQ8IZY5 108 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 FAM177A1Q8N128 213 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-229ENST00000486665 RGS22Q8NE09 1264 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 SHCBP1Q8NEM2 672 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 CCDC148Q8NFR7 591 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 RASGRP4Q8TDF6 673 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 PXYLP1Q8TE99 480 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 DIS3LQ8TF46 1054 aaKnown RBP14.66□□□□□ -0.06
HDAC6-229ENST00000486665 CCDC12Q8WUD4 166 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-229ENST00000486665 MROH8Q9H579 483 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 ACAD9Q9H845 621 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 C6orf50Q9HD87 102 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 PAK6Q9NQU5 681 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-229ENST00000486665 TMEM260Q9NX78 707 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 ZDHHC9Q9Y397 364 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 MYH6P13533 1939 aa14.66□□□□□ -0.06
HDAC6-229ENST00000486665 M0R2N6 131 aa14.65□□□□□ -0.06
HDAC6-229ENST00000486665 CFBP00751 764 aa14.65□□□□□ -0.06
HDAC6-229ENST00000486665 CALML3P27482 149 aa14.65□□□□□ -0.06
HDAC6-229ENST00000486665 GNA11P29992 359 aa14.65□□□□□ -0.06
HDAC6-229ENST00000486665 HOXA13P31271 388 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-229ENST00000486665 CCNA1P78396 465 aa14.65□□□□□ -0.06
HDAC6-229ENST00000486665 NR5A1Q13285 461 aa14.65□□□□□ -0.06
HDAC6-229ENST00000486665 BAATQ14032 418 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-229ENST00000486665 FOXD4L5Q5VV16 416 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-229ENST00000486665 MCF2L2Q86YR7 1114 aa14.65□□□□□ -0.06
HDAC6-229ENST00000486665 DIS3L2Q8IYB7 885 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms