RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 BACE1P56817 501 aa8.2□□□□□ -1.1
HDAC3-209ENST00000486618 GAS6Q14393 721 aa8.2□□□□□ -1.1
HDAC3-209ENST00000486618 DBN1Q16643 649 aa8.2□□□□□ -1.1
HDAC3-209ENST00000486618 LRRC26Q2I0M4 334 aa8.2□□□□□ -1.1
HDAC3-209ENST00000486618 MAP7D1Q3KQU3 841 aa8.2□□□□□ -1.1
HDAC3-209ENST00000486618 GMCL1Q96IK5 515 aa8.2□□□□□ -1.1
HDAC3-209ENST00000486618 FAM161BQ96MY7 647 aa8.2□□□□□ -1.1
HDAC3-209ENST00000486618 P2RX7Q99572 595 aaKnown RBP8.2□□□□□ -1.1
HDAC3-209ENST00000486618 WDR18Q9BV38 432 aa8.2□□□□□ -1.1
HDAC3-209ENST00000486618 MRS2Q9HD23 443 aa8.2□□□□□ -1.1
HDAC3-209ENST00000486618 COL2A1P02458 1487 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-209ENST00000486618 TTC36A6NLP5 189 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 CCER2I3L3R5 266 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 MSCO60682 206 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 PPFIA4O75335 1185 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 UBTFL1P0CB47 393 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-209ENST00000486618 CCND3P30281 292 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-209ENST00000486618 RHBDL3P58872 404 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 HERVK_113P62684 666 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 MECOMQ03112 1051 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 RASGRF1Q13972 1273 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 MFSD14CQ5VZR4 134 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 PLEKHH3Q7Z736 793 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 ZSCAN10Q96SZ4 725 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-209ENST00000486618 CDX2Q99626 313 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-209ENST00000486618 APBA2Q99767 749 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 NOL10Q9BSC4 688 aaKnown RBP8.19□□□□□ -1.1
HDAC3-209ENST00000486618 SENP6Q9GZR1 1112 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-209ENST00000486618 DHX36Q9H2U1 1008 aaKnown RBP8.19□□□□□ -1.1
HDAC3-209ENST00000486618 TIMMDC1Q9NPL8 285 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 PRDM6Q9NQX0 595 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 GINM1Q9NU53 330 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 PI4KBQ9UBF8 816 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 AKAP2Q9Y2D5 859 aa8.19□□□□□ -1.1
HDAC3-209ENST00000486618 USP17L10C9JJH3 530 aa8.18□□□□□ -1.1
HDAC3-209ENST00000486618 ADORA1P30542 326 aa8.18□□□□□ -1.1
HDAC3-209ENST00000486618 ERVK-24P63145 666 aa8.18□□□□□ -1.1
HDAC3-209ENST00000486618 CCNA1P78396 465 aa8.18□□□□□ -1.1
HDAC3-209ENST00000486618 MVPQ14764 893 aaKnown RBP8.18□□□□□ -1.1
HDAC3-209ENST00000486618 ZNF385CQ66K41 422 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-209ENST00000486618 GPR142Q7Z601 462 aa8.18□□□□□ -1.1
HDAC3-209ENST00000486618 FOXP4Q8IVH2 680 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-209ENST00000486618 SDR16C5Q8N3Y7 309 aa8.18□□□□□ -1.1
HDAC3-209ENST00000486618 MAFAQ8NHW3 353 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-209ENST00000486618 USP6NLQ92738 828 aa8.18□□□□□ -1.1
HDAC3-209ENST00000486618 EDC3Q96F86 508 aaKnown RBP8.18□□□□□ -1.1
HDAC3-209ENST00000486618 ALG2Q9H553 416 aa8.18□□□□□ -1.1
HDAC3-209ENST00000486618 RBPJLQ9UBG7 517 aa8.18□□□□□ -1.1
HDAC3-209ENST00000486618 MYO9BQ13459 2157 aa8.18□□□□□ -1.1
HDAC3-209ENST00000486618 NCOR1O75376 2440 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 BAG3O95817 575 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 CNGA1P29973 690 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 PHKA2P46019 1235 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 TIMM10P62072 90 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 IGBP1P78318 339 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 ATP2B2Q01814 1243 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 TLR1Q15399 786 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 CCL14Q16627 93 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 TEX11Q8IYF3 940 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 ARRDC4Q8NCT1 418 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 LPAR1Q92633 364 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 NSUN4Q96CB9 384 aaKnown RBP8.17□□□□□ -1.1
HDAC3-209ENST00000486618 PAGR1Q9BTK6 254 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 PORCNQ9H237 461 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 SEMA6BQ9H3T3 888 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 TXNRD2Q9NNW7 524 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 COPRSQ9NQ92 184 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 JADE2Q9NQC1 790 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 RAI14Q9P0K7 980 aa8.17□□□□□ -1.1
HDAC3-209ENST00000486618 DDX20Q9UHI6 824 aaKnown RBP8.17□□□□□ -1.1
HDAC3-209ENST00000486618 A0A1B0GUL7 405 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 SLC15A5A6NIM6 579 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 DNM1LO00429 736 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 ZRANB2O95218 330 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC3-209ENST00000486618 F11P03951 625 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 GDF10P55107 478 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 RTP1P59025 263 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 SMAD3P84022 425 aaKnown RBP8.16□□□□□ -1.1
HDAC3-209ENST00000486618 RRP1BQ14684 758 aaKnown RBP8.16□□□□□ -1.1
HDAC3-209ENST00000486618 C4orf17Q53FE4 359 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 TMEM214Q6NUQ4 689 aaKnown RBP8.16□□□□□ -1.1
HDAC3-209ENST00000486618 USP17L2Q6R6M4 530 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 ATF7IPQ6VMQ6 1270 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 SVOPQ8N4V2 548 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 CRACR2BQ8N4Y2 399 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-209ENST00000486618 SPATA5Q8NB90 893 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 WHAMMQ8TF30 809 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 SSH1Q8WYL5 1049 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 LRP2BPQ9P2M1 347 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 PA2G4Q9UQ80 394 aaKnown RBP8.16□□□□□ -1.1
HDAC3-209ENST00000486618 RABGAP1Q9Y3P9 1069 aa8.16□□□□□ -1.1
HDAC3-209ENST00000486618 FRMPD3Q5JV73 1810 aa8.15□□□□□ -1.1
HDAC3-209ENST00000486618 TMEM265A0A087WTH1 108 aa8.15□□□□□ -1.1
HDAC3-209ENST00000486618 USP17L15C9J2P7 530 aa8.15□□□□□ -1.1
HDAC3-209ENST00000486618 USP17L13C9JLJ4 530 aa8.15□□□□□ -1.1
HDAC3-209ENST00000486618 KBTBD13C9JR72 458 aa8.15□□□□□ -1.1
HDAC3-209ENST00000486618 USP17L11C9JVI0 530 aa8.15□□□□□ -1.1
HDAC3-209ENST00000486618 USP17L18D6R9N7 530 aa8.15□□□□□ -1.1
HDAC3-209ENST00000486618 USP17L22D6RA61 530 aa8.15□□□□□ -1.1
HDAC3-209ENST00000486618 USP17L17D6RBQ6 530 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms