RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 DDX49Q9Y6V7 483 aaKnown RBP14.99□□□□□ -0.01
CHMP3-208ENST00000486404 MOXD2PA6NHM9 499 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 CCDC69A6NI79 296 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 ADCY6O43306 1168 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 DDAH1O94760 285 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 CENPBP07199 599 aaPredicted RBP14.98□□□□□ -0.01
CHMP3-208ENST00000486404 MAGEA10P43363 369 aaPredicted RBP14.98□□□□□ -0.01
CHMP3-208ENST00000486404 ACLYP53396 1101 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 SLC39A5Q6ZMH5 540 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 TLK2Q86UE8 772 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 ZNF654Q8IZM8 581 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 DNERQ8NFT8 737 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 CTCFLQ8NI51 663 aaPredicted RBP14.98□□□□□ -0.01
CHMP3-208ENST00000486404 LBHD1Q9BQE6 289 aaPredicted RBP14.98□□□□□ -0.01
CHMP3-208ENST00000486404 AP5M1Q9H0R1 490 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 UPF3AQ9H1J1 476 aaKnown RBP14.98□□□□□ -0.01
CHMP3-208ENST00000486404 SENP2Q9HC62 589 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 STARD7Q9NQZ5 370 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 DNAH12Q6ZR08 3092 aa14.98□□□□□ -0.01
CHMP3-208ENST00000486404 PALM3A6NDB9 673 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-208ENST00000486404 MYADML2A6NDP7 307 aa14.97□□□□□ -0.01
CHMP3-208ENST00000486404 ZBTB5O15062 677 aa14.97□□□□□ -0.01
CHMP3-208ENST00000486404 CST5P28325 142 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-208ENST00000486404 KIF5BP33176 963 aa14.97□□□□□ -0.01
CHMP3-208ENST00000486404 GJA9P57773 515 aa14.97□□□□□ -0.01
CHMP3-208ENST00000486404 TRAF1Q13077 416 aa14.97□□□□□ -0.01
CHMP3-208ENST00000486404 GNASQ5JWF2 1037 aa14.97□□□□□ -0.01
CHMP3-208ENST00000486404 TMEM87BQ96K49 555 aa14.97□□□□□ -0.01
CHMP3-208ENST00000486404 GLT1D1Q96MS3 346 aa14.97□□□□□ -0.01
CHMP3-208ENST00000486404 MTA3Q9BTC8 594 aa14.97□□□□□ -0.01
CHMP3-208ENST00000486404 LY9Q9HBG7 655 aa14.97□□□□□ -0.01
CHMP3-208ENST00000486404 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.96□□□□□ -0.01
CHMP3-208ENST00000486404 A0A1W2PPC1 479 aa14.96□□□□□ -0.01
CHMP3-208ENST00000486404 SH2B2O14492 632 aaPredicted RBP14.96□□□□□ -0.01
CHMP3-208ENST00000486404 PQBP1O60828 265 aaKnown RBP14.96□□□□□ -0.01
CHMP3-208ENST00000486404 SNX17Q15036 470 aa14.96□□□□□ -0.01
CHMP3-208ENST00000486404 KCNA10Q16322 511 aa14.96□□□□□ -0.01
CHMP3-208ENST00000486404 RGS22Q8NE09 1264 aa14.96□□□□□ -0.01
CHMP3-208ENST00000486404 KLHDC9Q8NEP7 349 aa14.96□□□□□ -0.01
CHMP3-208ENST00000486404 MORC4Q8TE76 937 aa14.96□□□□□ -0.01
CHMP3-208ENST00000486404 VTI1AQ96AJ9 217 aa14.96□□□□□ -0.01
CHMP3-208ENST00000486404 MYL10Q9BUA6 226 aa14.96□□□□□ -0.01
CHMP3-208ENST00000486404 UBE2OQ9C0C9 1292 aaKnown RBP14.96□□□□□ -0.01
CHMP3-208ENST00000486404 MAF1Q9H063 256 aa14.96□□□□□ -0.01
CHMP3-208ENST00000486404 MROH7Q68CQ1 1323 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 ZEB2O60315 1214 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 SLC34A2O95436 690 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 CFBP00751 764 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 ASGR1P07306 291 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 SMPD1P17405 629 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 MDM2Q00987 491 aaPredicted RBP14.95□□□□□ -0.02
CHMP3-208ENST00000486404 TROAPQ12815 778 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 PPP2R5BQ15173 497 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 NECTIN1Q15223 517 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 FSCN1Q16658 493 aaKnown RBP14.95□□□□□ -0.02
CHMP3-208ENST00000486404 C1orf53Q5VUE5 145 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 IQSEC1Q6DN90 963 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 IGDCC4Q8TDY8 1250 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 PIGSQ96S52 555 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 GDF15Q99988 308 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 PDGFCQ9NRA1 345 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 SEC63Q9UGP8 760 aaKnown RBP14.95□□□□□ -0.02
CHMP3-208ENST00000486404 PCDHA1Q9Y5I3 950 aa14.95□□□□□ -0.02
CHMP3-208ENST00000486404 A0A0U1RQG5 324 aaPredicted RBP14.94□□□□□ -0.02
CHMP3-208ENST00000486404 CLTBP09497 229 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 CALM1P0DP23 149 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 CALM2P0DP24 149 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 CALM3P0DP25 149 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 FXR1P51114 621 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHMP3-208ENST00000486404 BEX3Q00994 111 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 KRT32Q14532 448 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 ARHGEF16Q5VV41 709 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 TAPT1Q6NXT6 567 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 TMTC2Q8N394 836 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 SYTL5Q8TDW5 730 aaPredicted RBP14.94□□□□□ -0.02
CHMP3-208ENST00000486404 NSUN6Q8TEA1 469 aaKnown RBP14.94□□□□□ -0.02
CHMP3-208ENST00000486404 SCFD2Q8WU76 684 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 PIBF1Q8WXW3 757 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 RMDN3Q96TC7 470 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 WDR11Q9BZH6 1224 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 PRO3102Q9H379 93 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 GPHNQ9NQX3 736 aaPredicted RBP14.94□□□□□ -0.02
CHMP3-208ENST00000486404 PDLIM7Q9NR12 457 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 GNEQ9Y223 722 aaKnown RBP14.94□□□□□ -0.02
CHMP3-208ENST00000486404 SLC12A7Q9Y666 1083 aa14.94□□□□□ -0.02
CHMP3-208ENST00000486404 ELP1O95163 1332 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 DCDC2CA8MYV0 355 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 DYNC1LI2O43237 492 aaPredicted RBP14.93□□□□□ -0.02
CHMP3-208ENST00000486404 EDNRBP24530 442 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 BMP8BP34820 402 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 GNAQP50148 359 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 TLE2Q04725 743 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 DUSP28Q4G0W2 176 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 BRDTQ58F21 947 aaPredicted RBP14.93□□□□□ -0.02
CHMP3-208ENST00000486404 CCSAPQ6IQ19 270 aaPredicted RBP14.93□□□□□ -0.02
CHMP3-208ENST00000486404 SYNE3Q6ZMZ3 975 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 MICU3Q86XE3 530 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 OR6J1Q8NGC5 347 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 MTMR8Q96EF0 704 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms