RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 JAKMIP3Q5VZ66 844 aa18.94■□□□□ 0.62
THBS3-207ENST00000486260 MCF2L2Q86YR7 1114 aa18.94■□□□□ 0.62
THBS3-207ENST00000486260 REXO1Q8N1G1 1221 aaKnown RBP18.94■□□□□ 0.62
THBS3-207ENST00000486260 GCOM1H8Y6P7 765 aaPredicted RBP18.93■□□□□ 0.62
THBS3-207ENST00000486260 POLR2MP0CAP2 368 aa18.93■□□□□ 0.62
THBS3-207ENST00000486260 CLK2P49760 499 aaKnown RBP18.93■□□□□ 0.62
THBS3-207ENST00000486260 CCNA1P78396 465 aa18.93■□□□□ 0.62
THBS3-207ENST00000486260 NSMFQ6X4W1 530 aa18.93■□□□□ 0.62
THBS3-207ENST00000486260 TNFRSF25Q93038 417 aa18.93■□□□□ 0.62
THBS3-207ENST00000486260 EFCC1Q9HA90 598 aa18.93■□□□□ 0.62
THBS3-207ENST00000486260 THSD7BQ9C0I4 1608 aa18.93■□□□□ 0.62
THBS3-207ENST00000486260 PIK3CDO00329 1044 aa18.93■□□□□ 0.62
THBS3-207ENST00000486260 COPB2P35606 906 aa18.93■□□□□ 0.62
THBS3-207ENST00000486260 EARS2Q5JPH6 523 aaKnown RBP18.93■□□□□ 0.62
THBS3-207ENST00000486260 WDR78Q5VTH9 848 aa18.93■□□□□ 0.62
THBS3-207ENST00000486260 SHCBP1Q8NEM2 672 aa18.93■□□□□ 0.62
THBS3-207ENST00000486260 RNF186Q9NXI6 227 aa18.93■□□□□ 0.62
THBS3-207ENST00000486260 FBXO40Q9UH90 709 aa18.93■□□□□ 0.62
THBS3-207ENST00000486260 TRPA1O75762 1119 aa18.92■□□□□ 0.62
THBS3-207ENST00000486260 TBC1D8O95759 1140 aa18.92■□□□□ 0.62
THBS3-207ENST00000486260 HSD17B4P51659 736 aa18.92■□□□□ 0.62
THBS3-207ENST00000486260 RPS6P62753 249 aaKnown RBP18.92■□□□□ 0.62
THBS3-207ENST00000486260 FOXD4L6Q3SYB3 417 aaPredicted RBP18.92■□□□□ 0.62
THBS3-207ENST00000486260 FOXD4L3Q6VB84 417 aaPredicted RBP18.92■□□□□ 0.62
THBS3-207ENST00000486260 RNF207Q6ZRF8 634 aa18.92■□□□□ 0.62
THBS3-207ENST00000486260 NOSTRINQ8IVI9 506 aa18.92■□□□□ 0.62
THBS3-207ENST00000486260 PGBD1Q96JS3 809 aa18.92■□□□□ 0.62
THBS3-207ENST00000486260 ZSCAN16Q9H4T2 348 aaPredicted RBP18.92■□□□□ 0.62
THBS3-207ENST00000486260 MROH8Q9H579 483 aa18.92■□□□□ 0.62
THBS3-207ENST00000486260 A1CFQ9NQ94 594 aaKnown RBP18.92■□□□□ 0.62
THBS3-207ENST00000486260 FAM205CA6NFA0 338 aa18.91■□□□□ 0.62
THBS3-207ENST00000486260 GHRHRQ02643 423 aa18.91■□□□□ 0.62
THBS3-207ENST00000486260 BAATQ14032 418 aaPredicted RBP18.91■□□□□ 0.62
THBS3-207ENST00000486260 FAM173BQ6P4H8 233 aa18.91■□□□□ 0.62
THBS3-207ENST00000486260 SLC30A10Q6XR72 485 aa18.91■□□□□ 0.62
THBS3-207ENST00000486260 PIK3AP1Q6ZUJ8 805 aa18.91■□□□□ 0.62
THBS3-207ENST00000486260 FCHSD1Q86WN1 690 aa18.91■□□□□ 0.62
THBS3-207ENST00000486260 CCAR1Q8IX12 1150 aaKnown RBP18.91■□□□□ 0.62
THBS3-207ENST00000486260 CCDC194A0A1B0GVG4 234 aa18.91■□□□□ 0.62
THBS3-207ENST00000486260 ANKRD35Q8N283 1001 aa18.91■□□□□ 0.62
THBS3-207ENST00000486260 CYP39A1Q9NYL5 469 aa18.91■□□□□ 0.62
THBS3-207ENST00000486260 COL20A1Q9P218 1284 aa18.91■□□□□ 0.62
THBS3-207ENST00000486260 RBBP6Q7Z6E9 1792 aaKnown RBP18.91■□□□□ 0.62
THBS3-207ENST00000486260 ECM2O94769 699 aaPredicted RBP18.9■□□□□ 0.62
THBS3-207ENST00000486260 KRT25Q7Z3Z0 450 aa18.9■□□□□ 0.62
THBS3-207ENST00000486260 BRAPQ7Z569 592 aa18.9■□□□□ 0.62
THBS3-207ENST00000486260 TEX2Q8IWB9 1127 aa18.9■□□□□ 0.62
THBS3-207ENST00000486260 SAMD3Q8N6K7 520 aa18.9■□□□□ 0.62
THBS3-207ENST00000486260 SYTL5Q8TDW5 730 aaPredicted RBP18.9■□□□□ 0.62
THBS3-207ENST00000486260 PURBQ96QR8 312 aaKnown RBP18.9■□□□□ 0.62
THBS3-207ENST00000486260 MAP3K20Q9NYL2 800 aaKnown RBP18.9■□□□□ 0.62
THBS3-207ENST00000486260 SPDYE3A6NKU9 549 aa18.89■□□□□ 0.61
THBS3-207ENST00000486260 MMP19Q99542 508 aa18.89■□□□□ 0.61
THBS3-207ENST00000486260 ANO3Q9BYT9 981 aa18.89■□□□□ 0.61
THBS3-207ENST00000486260 AP3B2Q13367 1082 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.88■□□□□ 0.61
THBS3-207ENST00000486260 DNAJC5GQ8N7S2 189 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 CFHR5Q9BXR6 569 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 FOSP01100 380 aaPredicted RBP18.88■□□□□ 0.61
THBS3-207ENST00000486260 FCER1AP12319 257 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 MAPK4P31152 587 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 KCTD2Q14681 263 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 NONOQ15233 471 aaKnown RBP eCLIP18.88■□□□□ 0.61
THBS3-207ENST00000486260 INF2Q27J81 1249 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 MYSM1Q5VVJ2 828 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 MCTP2Q6DN12 878 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 GPR142Q7Z601 462 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 TNPO1Q92973 898 aaKnown RBP18.88■□□□□ 0.61
THBS3-207ENST00000486260 CHAMP1Q96JM3 812 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 TAAR1Q96RJ0 339 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 MAF1Q9H063 256 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 PFASO15067 1338 aa18.88■□□□□ 0.61
THBS3-207ENST00000486260 TBCKQ8TEA7 893 aa18.87■□□□□ 0.61
THBS3-207ENST00000486260 ATP2B1P20020 1258 aa18.86■□□□□ 0.61
THBS3-207ENST00000486260 TOB1P50616 345 aaPredicted RBP18.86■□□□□ 0.61
THBS3-207ENST00000486260 CNTN2Q02246 1040 aa18.86■□□□□ 0.61
THBS3-207ENST00000486260 PLEKHH3Q7Z736 793 aa18.86■□□□□ 0.61
THBS3-207ENST00000486260 IVNS1ABPQ9Y6Y0 642 aa18.86■□□□□ 0.61
THBS3-207ENST00000486260 STRNO43815 780 aa18.86■□□□□ 0.61
THBS3-207ENST00000486260 PGK2P07205 417 aa18.86■□□□□ 0.61
THBS3-207ENST00000486260 PTPREP23469 700 aa18.86■□□□□ 0.61
THBS3-207ENST00000486260 UBXN2AP68543 259 aa18.86■□□□□ 0.61
THBS3-207ENST00000486260 MAP2K1Q02750 393 aaPredicted RBP18.86■□□□□ 0.61
THBS3-207ENST00000486260 RMDN3Q96TC7 470 aa18.86■□□□□ 0.61
THBS3-207ENST00000486260 ATP6V1DQ9Y5K8 247 aa18.86■□□□□ 0.61
THBS3-207ENST00000486260 PLXNB2O15031 1838 aa18.85■□□□□ 0.61
THBS3-207ENST00000486260 POTEB2H3BUK9 544 aa18.85■□□□□ 0.61
THBS3-207ENST00000486260 WNT7AO00755 349 aa18.85■□□□□ 0.61
THBS3-207ENST00000486260 DNM1Q05193 864 aaKnown RBP18.85■□□□□ 0.61
THBS3-207ENST00000486260 NBR1Q14596 966 aa18.85■□□□□ 0.61
THBS3-207ENST00000486260 NOL7Q9UMY1 257 aaKnown RBP18.85■□□□□ 0.61
THBS3-207ENST00000486260 DNAJC25-GNG10A0A024R161 153 aa18.84■□□□□ 0.61
THBS3-207ENST00000486260 EDIL3O43854 480 aa18.84■□□□□ 0.61
THBS3-207ENST00000486260 ADORA2AP29274 412 aa18.84■□□□□ 0.61
THBS3-207ENST00000486260 CTGFP29279 349 aa18.84■□□□□ 0.61
THBS3-207ENST00000486260 SREBF1P36956 1147 aa18.84■□□□□ 0.61
THBS3-207ENST00000486260 ARHGAP4P98171 946 aa18.84■□□□□ 0.61
THBS3-207ENST00000486260 SP3Q02447 781 aa18.84■□□□□ 0.61
THBS3-207ENST00000486260 RILPL1Q5EBL4 403 aa18.84■□□□□ 0.61
THBS3-207ENST00000486260 NEK8Q86SG6 692 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms