RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 PYCARDQ9ULZ3 195 aa13.48□□□□□ -0.25
PKP4-213ENST00000486254 TCP10L2B9ZVM9 353 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 NFKBIEO00221 500 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 WNT10BO00744 389 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 ASNSP08243 561 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 SLC16A2P36021 539 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 CCZ1BP86790 482 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 CCZ1P86791 482 aaPredicted RBP13.47□□□□□ -0.25
PKP4-213ENST00000486254 RRP1BQ14684 758 aaKnown RBP13.47□□□□□ -0.25
PKP4-213ENST00000486254 HYIQ5T013 277 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 FOXR2Q6PJQ5 311 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 FAM160B2Q86V87 743 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 FBXO11Q86XK2 927 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 CCDC47Q96A33 483 aaKnown RBP13.47□□□□□ -0.25
PKP4-213ENST00000486254 LRRC27Q9C0I9 530 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 TMEM260Q9NX78 707 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 STK24Q9Y6E0 443 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 ATAD5Q96QE3 1844 aa13.47□□□□□ -0.25
PKP4-213ENST00000486254 A0A1B0GTH6 734 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 LRRC10BA6NIK2 292 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 PLCG1P19174 1290 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 SFPQP23246 707 aaKnown RBP eCLIP13.46□□□□□ -0.25
PKP4-213ENST00000486254 CAP2P40123 477 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 STAT2P52630 851 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 PAK1Q13153 545 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 RASSF8Q8NHQ8 419 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 CHURC1Q8WUH1 139 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 PRIMPOLQ96LW4 560 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 MMTAG2Q9BU76 263 aaKnown RBP13.46□□□□□ -0.25
PKP4-213ENST00000486254 ANO3Q9BYT9 981 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 DEFB129Q9H1M3 183 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 VCPKMTQ9H867 229 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 KCNMB3Q9NPA1 279 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 MYOZ2Q9NPC6 264 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 DDX25Q9UHL0 483 aaKnown RBP13.46□□□□□ -0.25
PKP4-213ENST00000486254 KDM3AQ9Y4C1 1321 aa13.46□□□□□ -0.25
PKP4-213ENST00000486254 A0A1W2PRG0 241 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 CLRN2A0PK11 232 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 MEIS2O14770 477 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 SLC37A4O43826 429 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 KLRC4O43908 158 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 TDP2O95551 362 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
PKP4-213ENST00000486254 CIITAP33076 1130 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 SREBF1P36956 1147 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 JAG1P78504 1218 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 STIM1Q13586 685 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 SHROOM1Q2M3G4 852 aaPredicted RBP13.45□□□□□ -0.26
PKP4-213ENST00000486254 TMEM119Q4V9L6 283 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 TMC6Q7Z403 805 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 SLFN12Q8IYM2 578 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 GIMAP8Q8ND71 665 aaPredicted RBP13.45□□□□□ -0.26
PKP4-213ENST00000486254 TRIM9Q9C026 710 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 LRWD1Q9UFC0 647 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 ZBTB12Q9Y330 459 aaPredicted RBP13.45□□□□□ -0.26
PKP4-213ENST00000486254 PVALEFA0A1B0GWK0 134 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 TMEM232C9JQI7 657 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 CYP3A4P08684 503 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 SLURP2P0DP57 97 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 LRMPQ12912 555 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 TBX2Q13207 712 aaPredicted RBP13.45□□□□□ -0.26
PKP4-213ENST00000486254 Q4G0T1 1027 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 APTXQ7Z2E3 356 aaKnown RBP13.45□□□□□ -0.26
PKP4-213ENST00000486254 FILIP1Q7Z7B0 1213 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 ADSSL1Q8N142 457 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 NOC3LQ8WTT2 800 aaKnown RBP13.45□□□□□ -0.26
PKP4-213ENST00000486254 NT5C3AQ9H0P0 336 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 RANBP17Q9H2T7 1088 aaKnown RBP13.45□□□□□ -0.26
PKP4-213ENST00000486254 INTS13Q9NVM9 706 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 PNMA2Q9UL42 364 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 PRR12Q9ULL5 1215 aa13.45□□□□□ -0.26
PKP4-213ENST00000486254 PP2D1A8MPX8 630 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 H7C1D1 291 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 FZD9O00144 591 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 ZBTB7AO95365 584 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 TUBB4AP04350 444 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 TPM2P07951 284 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 SKILP12757 684 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 CDC25AP30304 524 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 TECP42680 631 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 GRB10Q13322 594 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 NR1I3Q14994 352 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 UBE2SQ16763 222 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 KRT79Q5XKE5 535 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 SPECC1LQ69YQ0 1117 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 FCHSD1Q86WN1 690 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 LPAR1Q92633 364 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 HAS1Q92839 578 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 DHTKD1Q96HY7 919 aaPredicted RBP13.44□□□□□ -0.26
PKP4-213ENST00000486254 VEZTQ9HBM0 779 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 ITIH6Q6UXX5 1313 aa13.44□□□□□ -0.26
PKP4-213ENST00000486254 DICER1Q9UPY3 1922 aaKnown RBP13.43□□□□□ -0.26
PKP4-213ENST00000486254 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
PKP4-213ENST00000486254 KIF2AO00139 706 aaPredicted RBP13.43□□□□□ -0.26
PKP4-213ENST00000486254 PSMA7O14818 248 aa13.43□□□□□ -0.26
PKP4-213ENST00000486254 CCP110O43303 1012 aa13.43□□□□□ -0.26
PKP4-213ENST00000486254 CDK11BP21127 795 aaKnown RBP13.43□□□□□ -0.26
PKP4-213ENST00000486254 ARHGAP4P98171 946 aa13.43□□□□□ -0.26
PKP4-213ENST00000486254 GHRHRQ02643 423 aa13.43□□□□□ -0.26
PKP4-213ENST00000486254 KMT5BQ4FZB7 885 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms