RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 OXR1Q8N573 874 aa8.73□□□□□ -1.01
RTN4-214ENST00000486085 ANKS4BQ8N8V4 417 aa8.73□□□□□ -1.01
RTN4-214ENST00000486085 PDZD8Q8NEN9 1154 aa8.73□□□□□ -1.01
RTN4-214ENST00000486085 DCAF4Q8WV16 495 aa8.73□□□□□ -1.01
RTN4-214ENST00000486085 RC3H2Q9HBD1 1191 aaKnown RBP8.73□□□□□ -1.01
RTN4-214ENST00000486085 NCOA5Q9HCD5 579 aaKnown RBP8.73□□□□□ -1.01
RTN4-214ENST00000486085 C19orf73Q9NVV2 129 aa8.73□□□□□ -1.01
RTN4-214ENST00000486085 C6orf222P0C671 652 aaPredicted RBP8.72□□□□□ -1.01
RTN4-214ENST00000486085 LCP1P13796 627 aa8.72□□□□□ -1.01
RTN4-214ENST00000486085 LTBRP36941 435 aa8.72□□□□□ -1.01
RTN4-214ENST00000486085 MBLAC2Q68D91 279 aa8.72□□□□□ -1.01
RTN4-214ENST00000486085 JMJD8Q96S16 334 aa8.72□□□□□ -1.01
RTN4-214ENST00000486085 NDOR1Q9UHB4 597 aa8.72□□□□□ -1.01
RTN4-214ENST00000486085 TRAF6Q9Y4K3 522 aa8.72□□□□□ -1.01
RTN4-214ENST00000486085 CD2APQ9Y5K6 639 aa8.72□□□□□ -1.01
RTN4-214ENST00000486085 A0A1W2PQ45 241 aaPredicted RBP8.71□□□□□ -1.02
RTN4-214ENST00000486085 A0A1W2PQY0 241 aa8.71□□□□□ -1.02
RTN4-214ENST00000486085 PLD2O14939 933 aa8.71□□□□□ -1.02
RTN4-214ENST00000486085 GDNFP39905 211 aa8.71□□□□□ -1.02
RTN4-214ENST00000486085 CHRNEQ04844 493 aa8.71□□□□□ -1.02
RTN4-214ENST00000486085 KCNAB2Q13303 367 aa8.71□□□□□ -1.02
RTN4-214ENST00000486085 PLEKHG4Q58EX7 1191 aa8.71□□□□□ -1.02
RTN4-214ENST00000486085 EGFLAMQ63HQ2 1017 aa8.71□□□□□ -1.02
RTN4-214ENST00000486085 FAM177A1Q8N128 213 aaPredicted RBP8.71□□□□□ -1.02
RTN4-214ENST00000486085 RCBTB1Q8NDN9 531 aa8.71□□□□□ -1.02
RTN4-214ENST00000486085 PTPRN2Q92932 1015 aa8.71□□□□□ -1.02
RTN4-214ENST00000486085 PHF20Q9BVI0 1012 aa8.71□□□□□ -1.02
RTN4-214ENST00000486085 CTNND2Q9UQB3 1225 aa8.71□□□□□ -1.02
RTN4-214ENST00000486085 ASXL2Q76L83 1435 aa8.71□□□□□ -1.02
RTN4-214ENST00000486085 C7orf72A4D263 438 aa8.7□□□□□ -1.02
RTN4-214ENST00000486085 NPHS1O60500 1241 aa8.7□□□□□ -1.02
RTN4-214ENST00000486085 TRHRP34981 398 aaPredicted RBP8.7□□□□□ -1.02
RTN4-214ENST00000486085 GABREP78334 506 aa8.7□□□□□ -1.02
RTN4-214ENST00000486085 TESK1Q15569 626 aa8.7□□□□□ -1.02
RTN4-214ENST00000486085 HSF5Q4G112 596 aaPredicted RBP8.7□□□□□ -1.02
RTN4-214ENST00000486085 STYK1Q6J9G0 422 aa8.7□□□□□ -1.02
RTN4-214ENST00000486085 SLCO6A1Q86UG4 719 aa8.7□□□□□ -1.02
RTN4-214ENST00000486085 SYNPOQ8N3V7 929 aa8.7□□□□□ -1.02
RTN4-214ENST00000486085 CLUHP3Q96NS8 147 aa8.7□□□□□ -1.02
RTN4-214ENST00000486085 MRPL4Q9BYD3 311 aaKnown RBP8.7□□□□□ -1.02
RTN4-214ENST00000486085 C19orf44Q9H6X5 657 aa8.7□□□□□ -1.02
RTN4-214ENST00000486085 NPFFR2Q9Y5X5 522 aa8.7□□□□□ -1.02
RTN4-214ENST00000486085 A0A1W2PQ27 194 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 A0A1W2PQ64 194 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 A0A1W2PQC6 194 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 A0A1W2PQD8 194 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 FITM1A5D6W6 292 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 WTIPA6NIX2 430 aaPredicted RBP8.69□□□□□ -1.02
RTN4-214ENST00000486085 MSCO60682 206 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 HPXP02790 462 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 KIAA0907Q7Z7F0 614 aaPredicted RBP8.69□□□□□ -1.02
RTN4-214ENST00000486085 SLC7A14Q8TBB6 771 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 FEZ1Q99689 392 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 SLC52A2Q9HAB3 445 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 BTG4Q9NY30 223 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 SFMBT1Q9UHJ3 866 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 PCDHA2Q9Y5H9 948 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 TAF6LQ9Y6J9 622 aa8.69□□□□□ -1.02
RTN4-214ENST00000486085 OAS3Q9Y6K5 1087 aaKnown RBP8.69□□□□□ -1.02
RTN4-214ENST00000486085 NOTOA8MTQ0 251 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 RAC2P15153 192 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 PABPC4Q13310 644 aaKnown RBP eCLIP8.68□□□□□ -1.022e-7■■■□□ 17.1
RTN4-214ENST00000486085 KIR3DS1Q14943 382 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 FNDC3BQ53EP0 1204 aaKnown RBP8.68□□□□□ -1.02
RTN4-214ENST00000486085 TIGD5Q53EQ6 642 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 GALNT18Q6P9A2 607 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 RSPO2Q6UXX9 243 aaPredicted RBP8.68□□□□□ -1.02
RTN4-214ENST00000486085 MAMDC2Q7Z304 686 aaPredicted RBP8.68□□□□□ -1.02
RTN4-214ENST00000486085 MYLIPQ8WY64 445 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 CHAMP1Q96JM3 812 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 PLCD4Q9BRC7 762 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 SP110Q9HB58 689 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 GPR27Q9NS67 375 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 IMPACTQ9P2X3 320 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 GULP1Q9UBP9 304 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 GPR160Q9UJ42 338 aa8.68□□□□□ -1.02
RTN4-214ENST00000486085 TIMM13Q9Y5L4 95 aaPredicted RBP8.68□□□□□ -1.02
RTN4-214ENST00000486085 NRDCO43847 1150 aa8.67□□□□□ -1.02
RTN4-214ENST00000486085 PSPNO60542 156 aa8.67□□□□□ -1.02
RTN4-214ENST00000486085 GYS2P54840 703 aa8.67□□□□□ -1.02
RTN4-214ENST00000486085 NBPF11Q86T75 865 aa8.67□□□□□ -1.02
RTN4-214ENST00000486085 IFNL3Q8IZI9 196 aa8.67□□□□□ -1.02
RTN4-214ENST00000486085 NUP43Q8NFH3 380 aa8.67□□□□□ -1.02
RTN4-214ENST00000486085 SLKQ9H2G2 1235 aaPredicted RBP8.67□□□□□ -1.02
RTN4-214ENST00000486085 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.66□□□□□ -1.02
RTN4-214ENST00000486085 AQP7O14520 342 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 MYO1BO43795 1136 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 PPP1R11O60927 126 aaPredicted RBP8.66□□□□□ -1.02
RTN4-214ENST00000486085 EFCAB14O75071 495 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 PRKCAP17252 672 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 BCL6P41182 706 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 GALK1P51570 392 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 GPR85P60893 370 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 RPL11P62913 178 aaKnown RBP8.66□□□□□ -1.02
RTN4-214ENST00000486085 NR0B2Q15466 257 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 TRIM61Q5EBN2 209 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 SIRT2Q8IXJ6 389 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 DPF3Q92784 378 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 ASIC4Q96FT7 647 aa8.66□□□□□ -1.02
RTN4-214ENST00000486085 ZFYVE21Q9BQ24 234 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 323.9 ms