RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 GINM1Q9NU53 330 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 TCP11L1Q9NUJ3 509 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 NYAP2Q9P242 653 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 MYH4Q9Y623 1939 aa6.58□□□□□ -1.36
COPS3-208ENST00000486032 PLIN4Q96Q06 1357 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 PTPRFP10586 1907 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 KLF18A0A0U1RQI7 1052 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 UNCXA6NJT0 531 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 C19orf81C9J6K1 198 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 F5H6K3 240 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 DHX16O60231 1041 aaKnown RBP6.57□□□□□ -1.36
COPS3-208ENST00000486032 PEX10O60683 326 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 DTNBO60941 627 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 NDUFB10O96000 172 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 GOLGA8HP0CJ92 632 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 TOP1P11387 765 aaKnown RBP6.57□□□□□ -1.36
COPS3-208ENST00000486032 CD46P15529 392 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 SLC1A4P43007 532 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 GTF2A2P52657 109 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 USP14P54578 494 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 AK2P54819 239 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 KLRC3Q07444 240 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 MOGSQ13724 837 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 RABEP1Q15276 862 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 KIAA1755Q5JYT7 1200 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 FAM83BQ5T0W9 1011 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 RCSD1Q6JBY9 416 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 KCTD1Q719H9 257 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 SH3RF1Q7Z6J0 888 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 CATIPQ7Z7H3 387 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 MICU3Q86XE3 530 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 DGKHQ86XP1 1220 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 ZNF654Q8IZM8 581 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 IGDCC4Q8TDY8 1250 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 PIBF1Q8WXW3 757 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 TTC14Q96N46 770 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 KIF2CQ99661 725 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 WDR18Q9BV38 432 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 TBC1D2Q9BYX2 928 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 TANGO6Q9C0B7 1094 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 UBA5Q9GZZ9 404 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 RPAP3Q9H6T3 665 aaPredicted RBP6.57□□□□□ -1.36
COPS3-208ENST00000486032 VCPKMTQ9H867 229 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 LY9Q9HBG7 655 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 RNF186Q9NXI6 227 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 TMX2Q9Y320 296 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 SLC12A7Q9Y666 1083 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 CASP8AP2Q9UKL3 1982 aa6.57□□□□□ -1.36
COPS3-208ENST00000486032 A0A0G2JLL6 359 aaPredicted RBP6.56□□□□□ -1.36
COPS3-208ENST00000486032 MANSC4A6NHS7 340 aaPredicted RBP6.56□□□□□ -1.36
COPS3-208ENST00000486032 GOLGA8AA7E2F4 631 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 GOLGA8BA8MQT2 603 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 TMEM232C9JQI7 657 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 CXCL11O14625 94 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 ZBTB43O43298 467 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 TRPA1O75762 1119 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 TBC1D8O95759 1140 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 NR3C2P08235 984 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 ZBTB48P10074 688 aaPredicted RBP6.56□□□□□ -1.36
COPS3-208ENST00000486032 CETPP11597 493 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 VCAM1P19320 739 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 SLC16A2P36021 539 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 NT5C2P49902 561 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 SNAP25P60880 206 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 CCT2P78371 535 aaKnown RBP6.56□□□□□ -1.36
COPS3-208ENST00000486032 IRX3P78415 501 aaPredicted RBP6.56□□□□□ -1.36
COPS3-208ENST00000486032 TOB2Q14106 344 aaPredicted RBP6.56□□□□□ -1.36
COPS3-208ENST00000486032 TREML2Q5T2D2 321 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 TTBK2Q6IQ55 1244 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 FASTKD5Q7L8L6 764 aaKnown RBP6.56□□□□□ -1.36
COPS3-208ENST00000486032 PRRT2Q7Z6L0 340 aaPredicted RBP6.56□□□□□ -1.36
COPS3-208ENST00000486032 RETREG3Q86VR2 466 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 FAM43AQ8N2R8 423 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 TMTC2Q8N394 836 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 CCDC82Q8N4S0 544 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 CTCFLQ8NI51 663 aaPredicted RBP6.56□□□□□ -1.36
COPS3-208ENST00000486032 BRI3BPQ8WY22 251 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 SYMPKQ92797 1274 aaKnown RBP6.56□□□□□ -1.36
COPS3-208ENST00000486032 HHIPL1Q96JK4 782 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 KIAA1683Q9H0B3 1180 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 CPVLQ9H3G5 476 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 VAT1LQ9HCJ6 419 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 EVA1BQ9NVM1 165 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 BRPF3Q9ULD4 1205 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 KCNH4Q9UQ05 1017 aa6.56□□□□□ -1.36
COPS3-208ENST00000486032 CTDP1Q9Y5B0 961 aaPredicted RBP6.56□□□□□ -1.36
COPS3-208ENST00000486032 GREB1LQ9C091 1923 aaPredicted RBP6.56□□□□□ -1.36
COPS3-208ENST00000486032 WDR19Q8NEZ3 1342 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 BTBD19C9JJ37 291 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 PDHXO00330 501 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 WDR46O15213 610 aaKnown RBP6.55□□□□□ -1.36
COPS3-208ENST00000486032 FLOT1O75955 427 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 PARP1P09874 1014 aaKnown RBP6.55□□□□□ -1.36
COPS3-208ENST00000486032 PDHBP11177 359 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 BMP3P12645 472 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 LIFRP42702 1097 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 METAP2P50579 478 aaKnown RBP eCLIP6.55□□□□□ -1.36
COPS3-208ENST00000486032 SREBF2Q12772 1141 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 NOGQ13253 232 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 ANKRD1Q15327 319 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms