RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 CRISPLD1Q9H336 500 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 SRP68Q9UHB9 627 aaKnown RBP6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 BCORQ6W2J9 1755 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 CARMIL3Q8ND23 1372 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 A0A0G2JLW4 131 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 POLRMTO00411 1230 aaKnown RBP6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 ELL2O00472 640 aaPredicted RBP6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 PDE8AO60658 829 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 VAMP4O75379 141 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 POU3F3P20264 500 aaPredicted RBP6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 SOX18P35713 384 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 EXOSC9Q06265 439 aaKnown RBP6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 PABPC4Q13310 644 aaKnown RBP eCLIP6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 CBX2Q14781 532 aaPredicted RBP6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 NFIXQ14938 502 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 EFHC2Q5JST6 749 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 HGSNATQ68CP4 663 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 WWC2Q6AWC2 1192 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 COPS6Q7L5N1 327 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 VWA5B2Q8N398 1253 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 TSPYL6Q8N831 410 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 PLBD2Q8NHP8 589 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 RPS6KC1Q96S38 1066 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 GAS2L1Q99501 681 aaPredicted RBP6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 TM9SF2Q99805 663 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 ANTXR1Q9H6X2 564 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 SZT2Q5T011 3432 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 KIAA1551Q9HCM1 1747 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 SCN7AQ01118 1682 aa6.87□□□□□ -1.31
NHLRC3-205ENST00000485407 RNF123Q5XPI4 1314 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 ZBED9Q6R2W3 1325 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 KIF13BQ9NQT8 1826 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 DDX58O95786 925 aaKnown RBP6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 SERPINB2P05120 415 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 MYL6BP14649 208 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 GUCY2CP25092 1073 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 PMLP29590 882 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 PIP4K2AP48426 406 aaPredicted RBP6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 EPHB1P54762 984 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 HNRNPUQ00839 825 aaKnown RBP eCLIP6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 TRIM28Q13263 835 aaKnown RBP6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 PPP2R5AQ15172 486 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 TTF1Q15361 905 aaPredicted RBP6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 PROSER3Q2NL68 480 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 LRRFIP1Q32MZ4 808 aaKnown RBP6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 MAP9Q49MG5 647 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 PARP10Q53GL7 1025 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 RNFT1Q5M7Z0 435 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 TBC1D9BQ66K14 1250 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 TTLL7Q6ZT98 887 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 SULF2Q8IWU5 870 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 GRIN3AQ8TCU5 1115 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 MUC3BQ9H195 1237 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 NRXN2Q9P2S2 1712 aa6.86□□□□□ -1.31
NHLRC3-205ENST00000485407 AFDNP55196 1824 aaKnown RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 IBTKQ9P2D0 1353 aaPredicted RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 PASKQ96RG2 1323 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 A0A087X0B3 334 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 CDC14CA4D256 554 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 IQCA1LA6NCM1 817 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 RASSF10A6NK89 507 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 NFKBIEO00221 500 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 ATXN7O15265 892 aaPredicted RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 TSPAN6O43657 245 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 CREB3O43889 395 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 PLIN1O60240 522 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 F11P03951 625 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 ARNTP27540 789 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 FXR1P51114 621 aaKnown RBP eCLIP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 SOX10P56693 466 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 RPL6Q02878 288 aaKnown RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 DDR1Q08345 913 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 OS9Q13438 667 aaPredicted RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 TCIRG1Q13488 830 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 NCAPHQ15003 741 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 NFE2Q16621 373 aaPredicted RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 ALDH1L2Q3SY69 923 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 CCSAPQ6IQ19 270 aaPredicted RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 VHLLQ6RSH7 139 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 SV2AQ7L0J3 742 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 DHX32Q7L7V1 743 aaKnown RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 ZNF34Q8IZ26 560 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 LRRC47Q8N1G4 583 aaKnown RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 ZBTB38Q8NAP3 1195 aaPredicted RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 XAGE3Q8WTP9 111 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 RELTQ969Z4 430 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 TRERF1Q96PN7 1200 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 BRIP1Q9BX63 1249 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 NYXQ9GZU5 481 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 CLEC4MQ9H2X3 399 aaPredicted RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 NIP7Q9Y221 180 aaKnown RBP eCLIP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 POLR3KQ9Y2Y1 108 aaPredicted RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 SLC12A7Q9Y666 1083 aa6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 N4BP2Q86UW6 1770 aaPredicted RBP6.85□□□□□ -1.31
NHLRC3-205ENST00000485407 CACNA1AO00555 2505 aa6.84□□□□□ -1.31
NHLRC3-205ENST00000485407 WDR33Q9C0J8 1336 aaKnown RBP6.84□□□□□ -1.31
NHLRC3-205ENST00000485407 DCDC2BA2VCK2 349 aa6.84□□□□□ -1.31
NHLRC3-205ENST00000485407 KLRG2A4D1S0 409 aaPredicted RBP6.84□□□□□ -1.31
NHLRC3-205ENST00000485407 ATE1O95260 518 aa6.84□□□□□ -1.31
NHLRC3-205ENST00000485407 MAP3K6O95382 1288 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms